vOTU vOTU-101027

vOTU: vOTU-101027

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-101027
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00124 → vGENUS-00131 → vOTU-101027
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0102412
Biosample ID	SAMEA3708599
Genome length (bp)	32,687 bps
CheckV completeness	80.15% (Medium-quality)
CDS count	47
CDS density	93.03%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium	Total connections	382	Host agreement	99.48
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium	Total connections	3	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 80.15)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0102412_1	K02342	79.4	4.5e-23	dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]	N/A
PHROG	UHGV-0102412_1	phrog_192	90.8	1.5e-26	DNA polymerase exonuclease subunit	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0102412_1	UniRef90_UPI001EE95DBE	86.3	0.00000000000000286	3'-5' exoribonuclease	N/A
eggNOG-mapper	UHGV-0102412_1	665956.HMPREF1032_02791	122.0	4.84e-28	N/A	N/A
PADLOC	UHGV-0102412_1	cd06127	73.5	6.1e-21	CAS-I,CAS-II,CAS-III,CAS-IV,CAS-V,CAS-VI; associated	CRISPR-CAS
Pfam	UHGV-0102412_1	PF00929	N/A	N/A	Exonuclease	RNase_T
Pfam	UHGV-0102412_1	PF00533	N/A	N/A	BRCA1 C Terminus (BRCT) domain	BRCT
COG	UHGV-0102412_1	COG0272	N/A	N/A	NAD-dependent DNA ligase	N/A
structural_annotation	UHGV-0102412_1	PF13361,PF00533,MF_00157,NF008746,COG2925	N/A	N/A	N/A	N/A
PHROG	UHGV-0102412_4	phrog_1373	41.3	0.000000000011	transcriptional regulator	transcription regulation
UniRef90	UHGV-0102412_4	UniRef90_A0A2A7AM70	188.0	0	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0102412_4	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0102412_4	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0102412_4	PF13560,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0102412_5	K14059	185.7	0	int; integrase	N/A
PHROG	UHGV-0102412_5	phrog_1	168.1	0	integrase	integration and excision
UniRef90	UHGV-0102412_5	UniRef90_A0A367GI93	221.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0102412_5	1507.HMPREF0262_00307	166.0	5.60519e-45	Phage integrase family	N/A
Pfam	UHGV-0102412_5	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0102412_5	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0102412_5	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0102412_6	1408437.JNJN01000043_gene801	97.4	2.28e-22	N/A	N/A
eggNOG-mapper	UHGV-0102412_7	658655.HMPREF0988_00916	116.0	9.9e-32	N/A	N/A
PHROG	UHGV-0102412_8	phrog_16490	102.6	3.6e-39	N/A	unknown function
eggNOG-mapper	UHGV-0102412_8	1408437.JNJN01000043_gene803	157.0	2.24208e-44	N/A	N/A
PHROG	UHGV-0102412_10	phrog_21718	40.0	0.000000000067	N/A	unknown function
structural_annotation	UHGV-0102412_11	PF07374,MF_00245,NF001072,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-0102412_13	phrog_15303	83.9	1.6e-24	N/A	unknown function
KOfam	UHGV-0102412_15	K07273	167.5	0	acm; lysozyme	N/A
PHROG	UHGV-0102412_15	phrog_291	128.5	6.9e-38	endolysin	lysis
UniRef90	UHGV-0102412_15	UniRef90_UPI001D0EE7D8	301.0	0	glycoside hydrolase family 25 protein	N/A
eggNOG-mapper	UHGV-0102412_15	748224.HMPREF9436_00154	285.0	0	hydrolase, family 25	N/A
Pfam	UHGV-0102412_15	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0102412_15	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0102412_15	PF01183,COG3757	N/A	N/A	N/A	N/A
UniRef90	UHGV-0102412_16	UniRef90_A0A844DDG4	99.4	1.4e-26	XkdX family protein	N/A
Pfam	UHGV-0102412_16	PF09693	N/A	N/A	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
structural_annotation	UHGV-0102412_16	PF09693,TIGR01669	N/A	N/A	N/A	N/A
KOfam	UHGV-0102412_18	K00986	97.5	1.6e-28	ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]	N/A
PHROG	UHGV-0102412_18	phrog_1423	185.6	0	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0102412_18	UniRef90_A0A844D6B7	695.0	0	Reverse transcriptase domain-containing protein	N/A
eggNOG-mapper	UHGV-0102412_18	1160721.RBI_I01568	218.0	0	Reverse transcriptase (RNA-dependent DNA polymerase)	N/A
PADLOC	UHGV-0102412_18	icity0040	88.6	1.2e-25	RT (reverse transcriptase)	CRISPR-CAS
Pfam	UHGV-0102412_18	PF00078	N/A	N/A	Reverse transcriptase (RNA-dependent DNA polymerase)	RVT_1
COG	UHGV-0102412_18	COG3344	N/A	N/A	Retron-type reverse transcriptase	N/A
structural_annotation	UHGV-0102412_18	PF00078,MF_01390,TIGR04416,COG3344	N/A	N/A	N/A	N/A
PHROG	UHGV-0102412_20	phrog_3206	40.6	0.000000000035	Avd protein of DGR	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0102412_20	1226322.HMPREF1545_03569	63.2	0.0000000000906	N/A	N/A
structural_annotation	UHGV-0102412_20	PF05635,MF_04067,NF008911	N/A	N/A	N/A	N/A
PHROG	UHGV-0102412_21	phrog_19280	101.3	7.9e-30	N/A	unknown function
UniRef90	UHGV-0102412_21	UniRef90_A0A844DHL3	786.0	0	N/A	N/A
eggNOG-mapper	UHGV-0102412_21	1203606.HMPREF1526_01924	67.4	0.00000000341	N/A	N/A
Pfam	UHGV-0102412_21	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-0102412_21	PF19789	N/A	N/A	N/A	N/A
PHROG	UHGV-0102412_22	phrog_13589	42.3	0.0000000000039	N/A	unknown function
structural_annotation	UHGV-0102412_22	PF10651,NF010435	N/A	N/A	N/A	N/A
PHROG	UHGV-0102412_24	phrog_1067	173.1	0	minor head protein	head and packaging
UniRef90	UHGV-0102412_24	UniRef90_A0A2A7AM44	709.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0102412_24	1123263.AUKY01000068_gene489	189.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0102412_24	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0102412_24	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0102412_24	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0102412_24	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0102412_25	phrog_33	72.9	7.9e-21	distal tail protein Dit	tail
UniRef90	UHGV-0102412_25	UniRef90_A0A173Z1X4	143.0	9.76e-39	Phage-related protein	N/A
eggNOG-mapper	UHGV-0102412_25	908340.HMPREF9406_2569	92.0	9.32e-20	phage tail	N/A
NCBIFam	UHGV-0102412_25	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
COG	UHGV-0102412_25	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0102412_25	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0102412_26	phrog_9959	95.2	4.2e-28	tail length tape measure protein	tail
UniRef90	UHGV-0102412_26	UniRef90_A0A2A7ALS3	807.0	0	TMP_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0102412_26	1224164.B843_03450	178.0	6.10966e-43	Tail protein	N/A
Pfam	UHGV-0102412_26	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0102412_26	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0102412_26	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0102412_26	PF20155,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0102412_29	phrog_88	94.8	9.7e-28	major tail protein	tail
UniRef90	UHGV-0102412_29	UniRef90_G9YSC5	111.0	4.07e-27	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-0102412_29	33035.JPJF01000039_gene278	72.4	0.000000000000542	N/A	N/A
NCBIFam	UHGV-0102412_29	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0102412_29	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0102412_30	phrog_5	49.3	0.000000000000089	tail completion or Neck1 protein	connector
UniRef90	UHGV-0102412_30	UniRef90_A0A1C6FG30	130.0	2.08e-35	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-0102412_30	908340.HMPREF9406_2573	110.0	2.84e-28	N/A	N/A
structural_annotation	UHGV-0102412_30	TIGR01725	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0102412_31	999413.HMPREF1094_02005	71.6	0.00000000000000883	N/A	N/A
structural_annotation	UHGV-0102412_31	PF05657,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-0102412_32	phrog_19734	95.8	4.3e-28	N/A	unknown function
UniRef90	UHGV-0102412_32	UniRef90_A0A0D8I708	78.6	3.75e-16	Phage head-tail joining protein	N/A
eggNOG-mapper	UHGV-0102412_32	349161.Dred_2602	73.9	0.00000000000000388	N/A	N/A
structural_annotation	UHGV-0102412_32	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0102412_33	phrog_749	54.8	0.0000000000000016	N/A	unknown function
eggNOG-mapper	UHGV-0102412_33	1211817.CCAT010000053_gene2133	62.8	0.0000000000224	N/A	N/A
PHROG	UHGV-0102412_34	phrog_10	128.1	6e-38	major head protein	head and packaging
UniRef90	UHGV-0102412_34	UniRef90_A0A2A7B712	720.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0102412_34	1235792.C808_00086	442.0	0	Phage capsid family	N/A
Pfam	UHGV-0102412_34	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
Pfam	UHGV-0102412_34	PF12733	N/A	N/A	Cadherin-like beta sandwich domain	Cadherin-like
NCBIFam	UHGV-0102412_34	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0102412_34	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0102412_34	PF05065,PF12733,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0102412_35	K01358	72.2	1e-20	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0102412_35	phrog_94	127.2	2e-37	head maturation protease	head and packaging
UniRef90	UHGV-0102412_35	UniRef90_UPI00111E41DA	134.0	3.34e-35	Clp protease ClpP	N/A
eggNOG-mapper	UHGV-0102412_35	1232452.BAIB02000007_gene1626	125.0	1.35e-32	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0102412_35	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0102412_35	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0102412_35	PF00574,MF_00444,TIGR00493,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0102412_36	phrog_12	131.0	9e-39	portal protein	head and packaging
UniRef90	UHGV-0102412_36	UniRef90_A0A2A7B6S8	558.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0102412_36	349161.Dred_2606	259.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0102412_36	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0102412_36	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0102412_36	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0102412_36	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0102412_37	phrog_9	241.1	0	terminase large subunit	head and packaging
UniRef90	UHGV-0102412_37	UniRef90_A0A2A7ALT4	1058.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0102412_37	1235792.C808_00083	633.0	0	Phage terminase-like protein large subunit	N/A
Pfam	UHGV-0102412_37	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0102412_37	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0102412_37	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0102412_38	phrog_13845	56.0	5.5e-16	N/A	unknown function
eggNOG-mapper	UHGV-0102412_38	1399942.U3PDR2_9CAUD	66.6	0.0000000000016	N/A	N/A
structural_annotation	UHGV-0102412_38	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0102412_39	phrog_119	58.6	1e-16	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0102412_39	UniRef90_A0A2A7B6I3	232.0	0	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-0102412_39	610130.Closa_0739	108.0	3.13e-29	HNH nucleases	N/A
Pfam	UHGV-0102412_39	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0102412_39	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
KOfam	UHGV-0102412_40	K00571	185.0	0	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0102412_40	phrog_67	191.0	0	DNA methyltransferase	other
UniRef90	UHGV-0102412_40	UniRef90_A0A1V5NVC0	258.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-0102412_40	1474867.A0A076FIB3_9PHYC	244.0	0	N-methyltransferase activity	N/A
PADLOC	UHGV-0102412_40	MTase_II_00037	157.4	0	Type II methyltransferase	RM
Pfam	UHGV-0102412_40	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
structural_annotation	UHGV-0102412_40	PF01555,MF_01872,NF008572,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-0102412_44	phrog_7711	111.5	5e-33	N/A	unknown function
UniRef90	UHGV-0102412_44	UniRef90_UPI001C38CAD2	102.0	3.98e-24	Lar family restriction alleviation protein	N/A
eggNOG-mapper	UHGV-0102412_44	1304866.K413DRAFT_1204	117.0	5.99e-32	N/A	N/A
structural_annotation	UHGV-0102412_45	PF04545	N/A	N/A	N/A	N/A
KOfam	UHGV-0102412_46	K03497	88.6	1.3e-25	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0102412_46	phrog_4715	116.3	2.7e-34	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0102412_46	UniRef90_A0A2A7AMC5	295.0	0	ParB domain-containing protein	N/A
eggNOG-mapper	UHGV-0102412_46	411471.SUBVAR_05842	180.0	0	ParB-like nuclease domain	N/A
Pfam	UHGV-0102412_46	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-0102412_46	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0102412_46	PF02195,MF_02015,TIGR03764,COG1475	N/A	N/A	N/A	N/A
UniRef90	UHGV-0102412_47	UniRef90_A0A845R8R0	96.3	2.81e-23	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0102412	Yes	32,687	54	80	1