vOTU vOTU-101129

vOTU: vOTU-101129

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-101129
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00579 → vGENUS-00893 → vOTU-101129
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135
Host range breadth	Species
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0036902
Biosample ID	SAMEA4969127
Genome length (bp)	38,911 bps
CheckV completeness	87.42% (Medium-quality)
CDS count	64
CDS density	90.24%
tRNA count	2
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135	Total connections	57	Host agreement	71.93
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000436735	Total connections	3	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 87.42)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0036902_1	UniRef90_A0A8F0WD75	75.9	0.0000000000000501	RNA polymerase sigma factor/Ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-0036902_1	1378168.N510_03079	65.9	0.000000000119	N/A	N/A
PHROG	UHGV-0036902_4	phrog_30113	274.4	0	N/A	unknown function
UniRef90	UHGV-0036902_4	UniRef90_A0A3D3Y6T9	417.0	0	N/A	N/A
eggNOG-mapper	UHGV-0036902_4	904144.AEJD01000003_gene1064	228.0	0	N/A	N/A
Pfam	UHGV-0036902_4	PF12686	N/A	N/A	N/A	DUF3800
structural_annotation	UHGV-0036902_4	PF01351,MF_00052_A,TIGR00729,COG1039	N/A	N/A	N/A	N/A
UniRef90	UHGV-0036902_5	UniRef90_A0A843IZ65	63.5	0.0000000000106	Sigma70_r4 domain-containing protein	N/A
Pfam	UHGV-0036902_5	PF08281	N/A	N/A	Sigma-70, region 4	Sigma70_r4_2
COG	UHGV-0036902_5	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0036902_5	PF04545,MF_00245,TIGR02985,COG2739	N/A	N/A	N/A	N/A
KOfam	UHGV-0036902_6	K01447	109.4	4.3e-32	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0036902_6	phrog_1794	110.7	1.6e-32	amidase	lysis
UniRef90	UHGV-0036902_6	UniRef90_A0A3D4VSU2	163.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0036902_6	411470.RUMGNA_02087	147.0	4.67e-39	N-Acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0036902_6	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0036902_6	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0036902_6	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-0036902_7	phrog_13256	60.4	1.8e-17	N/A	unknown function
eggNOG-mapper	UHGV-0036902_7	1226322.HMPREF1545_00166	76.3	2.18e-17	N/A	N/A
PHROG	UHGV-0036902_9	phrog_937	49.0	0.00000000000011	hemolysin	other
eggNOG-mapper	UHGV-0036902_9	1519439.JPJG01000023_gene533	73.2	0.00000000000000371	N/A	N/A
KOfam	UHGV-0036902_10	K16628	40.5	0.000000000006	COL7A; collagen type VII alpha	N/A
PHROG	UHGV-0036902_10	phrog_5240	48.1	0.000000000000077	tail fiber protein	tail
UniRef90	UHGV-0036902_10	UniRef90_R6LGA5	949.0	0	SGNH_hydro domain-containing protein	N/A
eggNOG-mapper	UHGV-0036902_10	1519439.JPJG01000060_gene1892	84.3	0.000000000000141	Collagen triple helix repeat (20 copies)	N/A
Pfam	UHGV-0036902_10	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
Pfam	UHGV-0036902_10	PF13472	N/A	N/A	GDSL-like Lipase/Acylhydrolase family	Lipase_GDSL_2
COG	UHGV-0036902_10	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
PHROG	UHGV-0036902_14	phrog_32308	74.0	1.4e-21	N/A	unknown function
eggNOG-mapper	UHGV-0036902_14	1122918.KB907248_gene4487	85.1	0.000000000000019	N/A	N/A
structural_annotation	UHGV-0036902_14	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0036902_15	phrog_1194	84.8	7.9e-25	N/A	unknown function
eggNOG-mapper	UHGV-0036902_15	1121333.JMLH01000047_gene1008	75.1	8.82e-16	N/A	N/A
Pfam	UHGV-0036902_15	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0036902_15	PF20458,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0036902_16	phrog_1535	90.6	1.4e-26	tail length tape measure protein	tail
UniRef90	UHGV-0036902_16	UniRef90_A0A173WM72	106.0	6.34e-20	Phage-related protein	N/A
eggNOG-mapper	UHGV-0036902_16	1123263.AUKY01000015_gene1620	100.0	8.74e-19	Phage tail tape measure protein TP901	N/A
COG	UHGV-0036902_16	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
eggNOG-mapper	UHGV-0036902_17	1121333.JMLH01000047_gene1011	51.6	0.000000768	N/A	N/A
UniRef90	UHGV-0036902_18	UniRef90_UPI001D0975F6	95.1	5.5e-23	N/A	N/A
eggNOG-mapper	UHGV-0036902_19	1298920.KI911353_gene2652	178.0	0	N/A	N/A
structural_annotation	UHGV-0036902_19	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0036902_20	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0036902_21	476272.RUMHYD_01963	81.6	3.72e-17	N/A	N/A
eggNOG-mapper	UHGV-0036902_22	1298920.KI911353_gene2656	94.0	6.52e-23	N/A	N/A
UniRef90	UHGV-0036902_23	UniRef90_A0A1V5X694	83.2	1.08e-18	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-0036902_23	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-0036902_23	TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0036902_24	phrog_544	71.1	1.2e-20	major head protein	head and packaging
eggNOG-mapper	UHGV-0036902_24	428127.EUBDOL_01555	228.0	0	N/A	N/A
structural_annotation	UHGV-0036902_24	PF05065,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0036902_27	phrog_6577	42.5	0.0000000000031	N/A	unknown function
UniRef90	UHGV-0036902_27	UniRef90_A0A3D3Y4T2	276.0	0	Phage_Mu_F domain-containing protein	N/A
Pfam	UHGV-0036902_27	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-0036902_27	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0036902_27	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0036902_28	phrog_64	215.9	0	portal protein	head and packaging
UniRef90	UHGV-0036902_28	UniRef90_A0A3D3Y472	803.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0036902_28	1123263.AUKY01000015_gene1609	381.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0036902_28	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0036902_28	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0036902_30	phrog_38	196.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-0036902_30	UniRef90_UPI000419A6BC	413.0	0	phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0036902_30	1232453.BAIF02000058_gene1623	415.0	0	TIGRFAM Phage	N/A
NCBIFam	UHGV-0036902_30	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-0036902_30	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0036902_30	PF17289,PF02562,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
UniRef90	UHGV-0036902_31	UniRef90_A0A318EMC2	67.0	0.000000000213	DNA-packaging protein gp3	N/A
eggNOG-mapper	UHGV-0036902_31	877421.AUJT01000054_gene66	56.2	0.000000148	N/A	N/A
Pfam	UHGV-0036902_31	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
PHROG	UHGV-0036902_32	phrog_33872	41.5	0.0000000000085	N/A	unknown function
UniRef90	UHGV-0036902_33	UniRef90_A0A1Y3R5J8	52.4	0.000000132	RHH_1 domain-containing protein	N/A
structural_annotation	UHGV-0036902_33	PF10723	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0036902_36	1232436.CAPF01000086_gene855	60.5	0.0000000129	N/A	N/A
KOfam	UHGV-0036902_38	K03466	181.6	0	ftsK, spoIIIE; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family	N/A
PHROG	UHGV-0036902_38	phrog_1358	148.9	1.82169e-44	FtsK/SpoIIIE-like protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0036902_38	UniRef90_A0A3D3Y6X7	342.0	0	FtsK domain-containing protein	N/A
eggNOG-mapper	UHGV-0036902_38	1002672.SAR11G3_00415	142.0	4.12e-36	DNA segregation ATPase FtsK SpoIIIE	N/A
PADLOC	UHGV-0036902_38	SspH_00004	72.9	2.1e-21	SspH	SSP
Pfam	UHGV-0036902_38	PF01580	N/A	N/A	FtsK/SpoIIIE family	FtsK_SpoIIIE
COG	UHGV-0036902_38	COG0733	N/A	N/A	Na+-dependent transporter, SNF family	N/A
structural_annotation	UHGV-0036902_38	PF01580,MF_00350,TIGR03925,COG4128	N/A	N/A	N/A	N/A
PHROG	UHGV-0036902_40	phrog_1770	47.8	0.00000000000027	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0036902_40	536233.CLO_1822	141.0	1.52999e-40	N/A	N/A
structural_annotation	UHGV-0036902_40	PF02075,MF_00034,NF000711,COG0817	N/A	N/A	N/A	N/A
Pfam	UHGV-0036902_41	PF13384	N/A	N/A	Homeodomain-like domain	HTH_23
eggNOG-mapper	UHGV-0036902_42	411459.RUMOBE_00108	46.2	0.00000957	positive regulation of transcription, DNA-templated	N/A
COG	UHGV-0036902_42	COG3835	N/A	N/A	Sugar diacid utilization regulator CdaR	N/A
structural_annotation	UHGV-0036902_43	PF10013	N/A	N/A	N/A	N/A
UniRef90	UHGV-0036902_44	UniRef90_UPI0019D1E2CF	163.0	0	FAD-dependent thymidylate synthase	N/A
eggNOG-mapper	UHGV-0036902_44	742735.HMPREF9467_00909	142.0	7.75997e-41	N/A	N/A
PHROG	UHGV-0036902_45	phrog_31336	47.2	0.00000000000022	N/A	unknown function
UniRef90	UHGV-0036902_45	UniRef90_A0A5C7LKL9	73.2	0.00000000000000801	N/A	N/A
eggNOG-mapper	UHGV-0036902_45	1357732.A0A059PYA6_9CAUD	62.0	0.0000000000423	N/A	N/A
Pfam	UHGV-0036902_45	PF18909	N/A	N/A	dATP/dGTP diphosphohydrolase, N-terminal	dGTP_diPhyd_N
structural_annotation	UHGV-0036902_45	PF18909	N/A	N/A	N/A	N/A
Pfam	UHGV-0036902_46	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0036902_46	NF041588	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0036902_48	NF033716	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0036902_50	1232443.BAIA02000078_gene48	55.5	0.0000000524	N/A	N/A
PHROG	UHGV-0036902_51	phrog_3136	133.4	3.7e-40	N/A	unknown function
UniRef90	UHGV-0036902_51	UniRef90_A0A329TS47	172.0	0	ASCH domain-containing protein	N/A
COG	UHGV-0036902_51	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0036902_51	PF08819,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
UniRef90	UHGV-0036902_52	UniRef90_UPI000D6F1461	54.7	0.00000209	N/A	N/A
Pfam	UHGV-0036902_52	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0036902_52	NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-0036902_53	phrog_424	77.8	1.3e-22	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
eggNOG-mapper	UHGV-0036902_53	445972.ANACOL_01819	496.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
COG	UHGV-0036902_53	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0036902_53	PF01507,MF_00064,NF010367,COG0175	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0036902_56	693746.OBV_43260	55.8	0.00000000129	N/A	N/A
structural_annotation	UHGV-0036902_56	PF09035,NF040990	N/A	N/A	N/A	N/A
PHROG	UHGV-0036902_58	phrog_5810	70.3	3e-20	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0036902_58	742740.HMPREF9474_03117	192.0	0	N/A	N/A
structural_annotation	UHGV-0036902_58	PF01475,NF006999,COG0735	N/A	N/A	N/A	N/A
KOfam	UHGV-0036902_59	K03111	131.2	1.2e-38	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0036902_59	phrog_44	131.6	5.8e-39	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0036902_59	UniRef90_A0A810QFR8	187.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0036902_59	693746.OBV_12860	184.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-0036902_59	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0036902_59	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0036902_59	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0036902_59	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0036902_59	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
UniRef90	UHGV-0036902_60	UniRef90_A0A3D1LDS4	147.0	1.68156e-44	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-0036902_60	445972.ANACOL_01826	93.2	8.71e-24	HNH nucleases	N/A
Pfam	UHGV-0036902_60	PF01844	N/A	N/A	HNH endonuclease	HNH
PHROG	UHGV-0036902_61	phrog_72	61.4	1.6e-17	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0036902_61	UniRef90_UPI001F3F3E5C	162.0	0	recombination protein NinB	N/A
eggNOG-mapper	UHGV-0036902_61	445972.ANACOL_01825	119.0	1.72e-31	N/A	N/A
structural_annotation	UHGV-0036902_61	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-0036902_62	phrog_659	44.7	0.0000000000016	Sak-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0036902_62	UniRef90_A0A845QLQ8	197.0	0	N/A	N/A
eggNOG-mapper	UHGV-0036902_62	445972.ANACOL_01823	94.4	4.81e-21	N/A	N/A
Pfam	UHGV-0036902_62	PF06378	N/A	N/A	N/A	DUF1071
structural_annotation	UHGV-0036902_62	PF06378,TIGR00607,COG5055	N/A	N/A	N/A	N/A
PHROG	UHGV-0036902_64	phrog_27197	57.0	3.2e-16	N/A	unknown function
eggNOG-mapper	UHGV-0036902_64	886882.PPSC2_p0048	72.4	0.000000000000228	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0036902_64	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-0036902_64	NF007410	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0036902	Yes	38,911	53	87	1