vOTU vOTU-101391

vOTU: vOTU-101391

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-101391
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00013 → vGENUS-00627 → vOTU-101391
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1913951
Biosample ID	N/A
Genome length (bp)	26,521 bps
CheckV completeness	62.78% (Medium-quality)
CDS count	51
CDS density	90.46%
tRNA count	5
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium	Total connections	631	Host agreement	98.89
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 62.78)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1913951_2	phrog_544	139.3	2.50006e-41	major head protein	head and packaging
UniRef90	UHGV-1913951_2	UniRef90_R0BKA1	435.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1913951_2	476272.RUMHYD_01776	318.0	0	N/A	N/A
structural_annotation	UHGV-1913951_2	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1913951_3	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1913951_5	phrog_5	49.2	0.00000000000012	tail completion or Neck1 protein	connector
UniRef90	UHGV-1913951_5	UniRef90_A0A6N7TNP6	300.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1913951_5	1123309.AQYB01000018_gene814	95.1	4.98e-23	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-1913951_5	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-1913951_5	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-1913951_8	phrog_8680	185.4	0	N/A	unknown function
UniRef90	UHGV-1913951_8	UniRef90_A0A6N7TNE8	349.0	0	N/A	N/A
eggNOG-mapper	UHGV-1913951_8	1423790.BN53_04265	157.0	7.28675e-44	Belongs to the N(4) N(6)-methyltransferase family	N/A
Pfam	UHGV-1913951_8	PF14386	N/A	N/A	N/A	DUF4417
COG	UHGV-1913951_8	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-1913951_8	PF14386	N/A	N/A	N/A	N/A
PHROG	UHGV-1913951_10	phrog_2468	81.0	7.8e-24	head morphogenesis	head and packaging
UniRef90	UHGV-1913951_10	UniRef90_A0A6N7TLR7	616.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-1913951_10	386415.NT01CX_2177	94.0	1.73e-18	Phage Mu protein F like protein	N/A
Pfam	UHGV-1913951_10	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-1913951_10	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1913951_10	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-1913951_12	phrog_64	128.9	1.6e-38	portal protein	head and packaging
UniRef90	UHGV-1913951_12	UniRef90_A0A6N7TNT3	651.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1913951_12	673376.F2VHW1_9CAUD	169.0	1.82169e-44	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1913951_12	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1913951_12	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
KOfam	UHGV-1913951_13	K06909	143.5	1.60028e-42	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1913951_13	phrog_10250	180.7	0	N/A	unknown function
UniRef90	UHGV-1913951_13	UniRef90_A0A844D8I4	791.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1913951_13	903814.ELI_3215	494.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-1913951_13	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-1913951_13	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1913951_13	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1913951_13	PF04466,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1913951_14	phrog_606	88.9	5.3e-26	terminase small subunit	head and packaging
UniRef90	UHGV-1913951_14	UniRef90_UPI001C02EFD1	329.0	0	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-1913951_14	397290.C810_05185	142.0	1.31e-40	DNA-packaging protein gp3	N/A
Pfam	UHGV-1913951_14	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-1913951_14	PF16677	N/A	N/A	N/A	N/A
PHROG	UHGV-1913951_16	phrog_36	54.5	0.000000000000002	transcriptional regulator	transcription regulation
structural_annotation	UHGV-1913951_16	PF07374,MF_00245,TIGR01636,COG2739	N/A	N/A	N/A	N/A
KOfam	UHGV-1913951_18	K01160	60.3	5.4e-17	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1913951_18	phrog_34	62.6	7.1e-18	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1913951_18	UniRef90_A0A6N7TND6	221.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-1913951_18	875454.BAEW01000002_gene491	134.0	6e-39	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-1913951_18	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-1913951_18	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-1913951_18	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-1913951_20	phrog_757	144.6	4.2039e-43	DNA methyltransferase	other
UniRef90	UHGV-1913951_20	UniRef90_UPI001A9B5584	259.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-1913951_20	748224.HMPREF9436_03069	297.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-1913951_20	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1913951_23	PF01775,MF_00273,NF001981,COG2157	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1913951_24	PF11417	N/A	N/A	N/A	N/A
KOfam	UHGV-1913951_25	K02086	65.4	8.6e-19	dnaD; DNA replication protein	N/A
PHROG	UHGV-1913951_25	phrog_186	73.2	3.9e-21	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1913951_25	UniRef90_A0A6N7TLH4	261.0	0	DnaD domain protein	N/A
eggNOG-mapper	UHGV-1913951_25	877411.JMMA01000002_gene2292	69.3	0.0000000000506	N/A	N/A
Pfam	UHGV-1913951_25	PF19808	N/A	N/A	N/A	DUF6291
Pfam	UHGV-1913951_25	PF07261	N/A	N/A	Replication initiation and membrane attachment	DnaB_2
NCBIFam	UHGV-1913951_25	TIGR01446.1	N/A	N/A	DnaD domain protein	N/A
structural_annotation	UHGV-1913951_25	PF19808,PF07261,TIGR01446,COG3935	N/A	N/A	N/A	N/A
KOfam	UHGV-1913951_26	K03111	145.6	5.00264e-43	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1913951_26	phrog_44	145.1	3.19496e-43	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1913951_26	UniRef90_D4K451	265.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1913951_26	718252.FP2_06770	265.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-1913951_26	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1913951_26	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1913951_26	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1913951_26	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1913951_26	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1913951_27	phrog_7838	119.5	2.3e-35	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1913951_27	UniRef90_A0A8D9UGW3	177.0	0	DNA repair protein RAD52-like protein	N/A
eggNOG-mapper	UHGV-1913951_27	742767.HMPREF9456_02052	139.0	1.49e-38	N/A	N/A
structural_annotation	UHGV-1913951_27	PF04098,TIGR00607,COG4380	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1913951_29	PF06718	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1913951_33	PF10743,NF033787	N/A	N/A	N/A	N/A
PHROG	UHGV-1913951_34	phrog_4433	102.0	6e-30	N/A	unknown function
UniRef90	UHGV-1913951_34	UniRef90_A0A6M5C839	89.0	1.32e-19	Putative ADP-ribosyltransferase	N/A
eggNOG-mapper	UHGV-1913951_34	573061.Clocel_3578	88.2	8.62e-19	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-1913951_34	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
eggNOG-mapper	UHGV-1913951_35	1121865.OMW_01950	71.2	0.00000000000000264	N/A	N/A
structural_annotation	UHGV-1913951_35	PF17516,NF007197	N/A	N/A	N/A	N/A
PHROG	UHGV-1913951_36	phrog_2593	87.5	1.8e-25	anti-repressor	transcription regulation
UniRef90	UHGV-1913951_36	UniRef90_A0A1Y4RA31	176.0	0	Bro-N domain-containing protein	N/A
eggNOG-mapper	UHGV-1913951_36	476272.RUMHYD_03308	157.0	4.2039e-45	BRO family, N-terminal domain	N/A
COG	UHGV-1913951_36	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-1913951_36	PF02498,COG3617	N/A	N/A	N/A	N/A
PHROG	UHGV-1913951_40	phrog_32852	49.1	0.00000000000008	N/A	unknown function
KOfam	UHGV-1913951_42	K22300	60.8	3e-17	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1913951_42	phrog_8	43.8	0.0000000000038	transcriptional regulator	transcription regulation
UniRef90	UHGV-1913951_42	UniRef90_A0A844DFR0	214.0	0	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1913951_42	748224.HMPREF9436_01444	166.0	0	N/A	N/A
Pfam	UHGV-1913951_42	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-1913951_42	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1913951_42	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-1913951_44	UniRef90_A0A367GGY9	121.0	3.89e-27	SAP domain-containing protein	N/A
eggNOG-mapper	UHGV-1913951_44	1280696.ATVY01000034_gene3237	134.0	1.21e-32	Putative DNA-binding (bihelical) motif predicted to be involved in chromosomal organisation	N/A
eggNOG-mapper	UHGV-1913951_45	321955.AAGP01000017_gene2211	64.7	0.000000000159	N/A	N/A
structural_annotation	UHGV-1913951_45	PF16900,NF040991	N/A	N/A	N/A	N/A
UniRef90	UHGV-1913951_48	UniRef90_A0A6N7TLT0	208.0	0	Helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-1913951_48	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1913951_48	PF13560,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1913951_49	K14059	141.2	1.19993e-41	int; integrase	N/A
PHROG	UHGV-1913951_49	phrog_1	166.7	0	integrase	integration and excision
UniRef90	UHGV-1913951_49	UniRef90_A0A6N7TNQ4	712.0	0	Tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-1913951_49	411471.SUBVAR_05137	263.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1913951_49	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1913951_49	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-1913951_49	PF00589,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1913951_51	PF12510	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1913951	Yes	26,521	53	63	1