vOTU vOTU-103484

vOTU: vOTU-103484

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-103484
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00010 → vSUBFAM-00261 → vGENUS-00170 → vOTU-103484
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-103
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2169498
Biosample ID	SAMN05545073
Genome length (bp)	17,928 bps
CheckV completeness	51.46% (Medium-quality)
CDS count	24
CDS density	96.29%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-103	Total connections	213	Host agreement	93.9
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-103	Total connections	41	Host agreement	97.56

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 51.46)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-2169498_1	phrog_533	206.9	0	portal protein	head and packaging
UniRef90	UHGV-2169498_1	UniRef90_A0A173TY48	343.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-2169498_1	33035.JPJF01000106_gene3135	327.0	0	phage minor capsid protein	N/A
structural_annotation	UHGV-2169498_1	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-2169498_2	phrog_581	248.5	0	minor head protein	head and packaging
UniRef90	UHGV-2169498_2	UniRef90_A0A3D4T830	355.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-2169498_2	476272.RUMHYD_01761	224.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-2169498_2	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-2169498_2	PF21814	N/A	N/A	N/A	DUF6883
COG	UHGV-2169498_2	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2169498_2	PF06152,PF21814	N/A	N/A	N/A	N/A
UniRef90	UHGV-2169498_3	UniRef90_UPI000C08D045	48.1	0.00000579	N/A	N/A
PHROG	UHGV-2169498_4	phrog_194	43.1	0.0000000000073	head scaffolding protein	head and packaging
UniRef90	UHGV-2169498_4	UniRef90_UPI001C0EBA51	128.0	1.7e-33	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-2169498_4	1539298.JO41_08210	63.2	0.000000000913	Phage minor structural protein GP20	N/A
Pfam	UHGV-2169498_4	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-2169498_4	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-2169498_5	phrog_267	54.5	0.0000000000000016	major head protein	head and packaging
eggNOG-mapper	UHGV-2169498_5	33035.JPJF01000030_gene2294	177.0	0	N/A	N/A
structural_annotation	UHGV-2169498_5	PF11651,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-2169498_6	phrog_541	70.1	2.9e-20	head-tail adaptor	connector
eggNOG-mapper	UHGV-2169498_6	476272.RUMHYD_01778	74.7	0.00000000000000787	N/A	N/A
PHROG	UHGV-2169498_7	phrog_3366	50.2	0.000000000000047	N/A	unknown function
structural_annotation	UHGV-2169498_7	PF20536,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-2169498_8	phrog_556	61.2	3e-18	minor head protein	head and packaging
UniRef90	UHGV-2169498_8	UniRef90_A0A1H7MNM8	122.0	8.76e-33	Minor capsid protein	N/A
eggNOG-mapper	UHGV-2169498_8	476272.RUMHYD_01780	113.0	4.83e-30	N/A	N/A
Pfam	UHGV-2169498_8	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-2169498_8	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-2169498_9	phrog_3266	66.6	3.2e-19	tail completion	connector
eggNOG-mapper	UHGV-2169498_9	476272.RUMHYD_01781	118.0	1.09e-31	N/A	N/A
structural_annotation	UHGV-2169498_9	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-2169498_10	phrog_3099	87.5	1.6e-25	N/A	unknown function
eggNOG-mapper	UHGV-2169498_10	693746.OBV_18150	223.0	0	N/A	N/A
structural_annotation	UHGV-2169498_10	PF10772,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-2169498_11	phrog_11299	101.6	7.1e-30	N/A	unknown function
eggNOG-mapper	UHGV-2169498_11	1449050.JNLE01000003_gene3883	65.9	0.0000000000142	N/A	N/A
structural_annotation	UHGV-2169498_11	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-2169498_12	phrog_706	107.3	1.3e-31	N/A	unknown function
UniRef90	UHGV-2169498_12	UniRef90_UPI00164D7633	178.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-2169498_12	693746.OBV_18170	169.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-2169498_12	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-2169498_12	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-2169498_13	phrog_1535	136.3	0	tail length tape measure protein	tail
UniRef90	UHGV-2169498_13	UniRef90_A0A810PX76	115.0	3.46e-23	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-2169498_13	1449050.JNLE01000003_gene3881	150.0	2.09e-35	domain protein	N/A
COG	UHGV-2169498_13	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2169498_14	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-2169498_15	phrog_6616	59.3	2.2e-18	tail protein	tail
structural_annotation	UHGV-2169498_15	PF13550,PF09931,NF033848,COG3500	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2169498_16	PF20622,NF033814	N/A	N/A	N/A	N/A
KOfam	UHGV-2169498_17	K01104	45.2	0.00000000000028	E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]	N/A
UniRef90	UHGV-2169498_17	UniRef90_UPI001BF10870	196.0	0	Tyrosine-protein phosphatase	N/A
eggNOG-mapper	UHGV-2169498_17	610130.Closa_0587	75.1	0.00000000000266	Tyrosine phosphatase family	N/A
Pfam	UHGV-2169498_17	PF13350	N/A	N/A	Tyrosine phosphatase family	Y_phosphatase3
COG	UHGV-2169498_17	COG2365	N/A	N/A	Protein tyrosine/serine phosphatase Oca4	N/A
structural_annotation	UHGV-2169498_17	PF13350,TIGR01244,COG2365	N/A	N/A	N/A	N/A
KOfam	UHGV-2169498_18	K01447	117.9	1.1e-34	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-2169498_18	phrog_670	130.1	2.2e-38	endolysin	lysis
UniRef90	UHGV-2169498_18	UniRef90_R5B1Z3	392.0	0	N-acetylmuramoyl-L-alanine amidase domain-containing protein	N/A
eggNOG-mapper	UHGV-2169498_18	97138.C820_00738	223.0	0	Ami_2	N/A
Pfam	UHGV-2169498_18	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
NCBIFam	UHGV-2169498_18	NF040910.1	N/A	N/A	CD1375 family protein	N/A
COG	UHGV-2169498_18	COG3023	N/A	N/A	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	N/A
structural_annotation	UHGV-2169498_18	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-2169498_19	phrog_1863	59.7	1.1e-17	N/A	unknown function
UniRef90	UHGV-2169498_19	UniRef90_UPI001F223E8B	68.2	0.000000000000329	hemolysin XhlA family protein	N/A
eggNOG-mapper	UHGV-2169498_19	1226322.HMPREF1545_04027	65.9	0.000000000000438	N/A	N/A
PHROG	UHGV-2169498_20	phrog_1129	63.2	3.1e-18	holin	lysis
UniRef90	UHGV-2169498_20	UniRef90_A0A8J6J3M3	102.0	7.38e-27	Phage holin family protein	N/A
eggNOG-mapper	UHGV-2169498_20	742740.HMPREF9474_03522	100.0	7.36e-27	N/A	N/A
Pfam	UHGV-2169498_20	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-2169498_20	PF06946	N/A	N/A	N/A	N/A
UniRef90	UHGV-2169498_21	UniRef90_A0A4R1QMH6	87.0	3.93e-21	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-2169498_21	445972.ANACOL_00210	101.0	1.03e-27	N/A	N/A
Pfam	UHGV-2169498_21	PF13412	N/A	N/A	Winged helix-turn-helix DNA-binding	HTH_24
structural_annotation	UHGV-2169498_21	PF13560,TIGR02612,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-2169498_24	K06400	273.0	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-2169498_24	phrog_95	281.0	0	integrase	integration and excision
UniRef90	UHGV-2169498_24	UniRef90_A0A417HSQ2	374.0	0	Recombinase family protein	N/A
eggNOG-mapper	UHGV-2169498_24	1356854.N007_18555	189.0	0	Recombinase	N/A
Pfam	UHGV-2169498_24	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-2169498_24	PF07508	N/A	N/A	Recombinase	Recombinase
COG	UHGV-2169498_24	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-2169498_24	PF00239,PF07508,NF041201,COG1961	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-2169498	Yes	17,928	58	51	1