vOTU vOTU-103609

vOTU: vOTU-103609

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-103609
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00011 → vSUBFAM-07293 → vOTU-103609
Host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae
Host range breadth	Family
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0137462
Biosample ID	SAMN02676203
Genome length (bp)	26,326 bps
CheckV completeness	64.85% (Medium-quality)
CDS count	33
CDS density	89.49%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae	Total connections	8	Host agreement	75
PHIST-predicted host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Lactobacillaceae → Schleiferilactobacillus → Schleiferilactobacillus harbinensis	Total connections	2	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 64.85)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0137462_1	phrog_248	103.4	2.1e-30	transcriptional activator	transcription regulation
UniRef90	UHGV-0137462_1	UniRef90_A0A5P8Q6J3	94.4	7.49e-22	Transcriptional regulator	N/A
eggNOG-mapper	UHGV-0137462_1	146269.A8YQN1_9CAUD	91.7	1.15e-21	N/A	N/A
NCBIFam	UHGV-0137462_1	TIGR01637.1	N/A	N/A	ArpU family phage packaging/lysis transcriptional regulator	N/A
structural_annotation	UHGV-0137462_1	TIGR01637	N/A	N/A	N/A	N/A
KOfam	UHGV-0137462_2	K06191	57.9	2.6e-16	nrdH; glutaredoxin-like protein NrdH	N/A
PHROG	UHGV-0137462_2	phrog_22	50.4	0.000000000000032	thioredoxin domain	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0137462_2	UniRef90_A0A0B8TX50	94.4	7.37e-23	Ribonucleoside-diphosphate reductase	N/A
eggNOG-mapper	UHGV-0137462_2	1122147.AUEH01000094_gene1586	180.0	0	N/A	N/A
structural_annotation	UHGV-0137462_2	PF13728,MF_01835,NF007657,COG3118	N/A	N/A	N/A	N/A
PHROG	UHGV-0137462_3	phrog_10715	145.6	0	hydrolase	other
UniRef90	UHGV-0137462_3	UniRef90_A0A2D1GPN0	130.0	6.9e-34	Hydrolase activity protein	N/A
eggNOG-mapper	UHGV-0137462_3	1122147.AUEH01000094_gene1587	260.0	0	N/A	N/A
PHROG	UHGV-0137462_4	phrog_34013	93.1	1.8e-27	N/A	unknown function
KOfam	UHGV-0137462_5	K07451	55.8	9.1e-16	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-0137462_5	phrog_119	96.6	3e-28	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0137462_5	UniRef90_A0A829H9K2	235.0	0	HNHc domain-containing protein	N/A
eggNOG-mapper	UHGV-0137462_5	565653.EGBG_01962	135.0	4.15e-40	HNH nucleases	N/A
Pfam	UHGV-0137462_5	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0137462_5	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0137462_5	PF05766,NF008448	N/A	N/A	N/A	N/A
PHROG	UHGV-0137462_6	phrog_2343	115.9	1.3e-34	terminase small subunit	head and packaging
UniRef90	UHGV-0137462_6	UniRef90_A0A2B9SE37	94.4	4.99e-23	Terminase	N/A
eggNOG-mapper	UHGV-0137462_6	1423732.BALS01000123_gene2507	168.0	0	N/A	N/A
Pfam	UHGV-0137462_6	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
structural_annotation	UHGV-0137462_6	PF05119,TIGR01558	N/A	N/A	N/A	N/A
PHROG	UHGV-0137462_7	phrog_9	271.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-0137462_7	UniRef90_A0A0R1EXP3	1113.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0137462_7	1423816.BACQ01000026_gene945	1112.0	0	Phage Terminase	N/A
Pfam	UHGV-0137462_7	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0137462_7	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0137462_7	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0137462_7	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0137462_8	phrog_12	148.9	2.8026e-44	portal protein	head and packaging
UniRef90	UHGV-0137462_8	UniRef90_A0A0E2BL24	742.0	0	Phage-associated portal protein	N/A
eggNOG-mapper	UHGV-0137462_8	1423816.BACQ01000026_gene944	748.0	0	Phage portal protein	N/A
Pfam	UHGV-0137462_8	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0137462_8	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0137462_8	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0137462_8	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0137462_9	K01358	132.3	5e-39	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0137462_9	phrog_94	192.7	0	head maturation protease	head and packaging
UniRef90	UHGV-0137462_9	UniRef90_K6QG72	389.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-0137462_9	1423732.BALS01000095_gene1459	393.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0137462_9	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0137462_9	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0137462_9	PF00574,MF_00444,NF011091,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0137462_10	phrog_10	138.0	9.10003e-41	major head protein	head and packaging
UniRef90	UHGV-0137462_10	UniRef90_A0A0R1ER93	688.0	0	Major head protein Cps	N/A
eggNOG-mapper	UHGV-0137462_10	1423816.BACQ01000026_gene942	688.0	0	Phage capsid family	N/A
Pfam	UHGV-0137462_10	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0137462_10	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0137462_10	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0137462_10	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0137462_11	phrog_749	110.5	7e-33	N/A	unknown function
UniRef90	UHGV-0137462_11	UniRef90_A0A5R8L7V9	168.0	0	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-0137462_11	1423816.BACQ01000026_gene941	172.0	0	N/A	N/A
structural_annotation	UHGV-0137462_11	TIGR01560	N/A	N/A	N/A	N/A
UniRef90	UHGV-0137462_12	UniRef90_K6RFM7	214.0	0	Putative phage protein	N/A
eggNOG-mapper	UHGV-0137462_12	1423816.BACQ01000026_gene940	216.0	0	N/A	N/A
structural_annotation	UHGV-0137462_12	PF19586,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0137462_13	phrog_5	42.1	0.000000000022	tail completion or Neck1 protein	connector
UniRef90	UHGV-0137462_13	UniRef90_A0A0A1GTA7	162.0	0	Gp9 protein	N/A
eggNOG-mapper	UHGV-0137462_13	1423816.BACQ01000026_gene939	212.0	0	N/A	N/A
structural_annotation	UHGV-0137462_13	PF04883,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0137462_14	phrog_78	87.5	1.4e-25	tail terminator	connector
UniRef90	UHGV-0137462_14	UniRef90_A0A0E2BLI0	223.0	0	Putative phage protein	N/A
eggNOG-mapper	UHGV-0137462_14	1423816.BACQ01000026_gene938	225.0	0	N/A	N/A
structural_annotation	UHGV-0137462_14	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-0137462_15	phrog_88	117.1	1.5e-34	major tail protein	tail
UniRef90	UHGV-0137462_15	UniRef90_UPI001CDCE3BE	350.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0137462_15	1423816.BACQ01000026_gene937	325.0	0	Phage tail tube protein	N/A
Pfam	UHGV-0137462_15	PF04630	N/A	N/A	Phage tail tube protein	Phage_TTP_1
NCBIFam	UHGV-0137462_15	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0137462_15	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
KOfam	UHGV-0137462_16	K20846	46.5	0.00000000000034	cgkA; kappa-carrageenase [EC:3.2.1.83]	N/A
PHROG	UHGV-0137462_16	phrog_215	88.6	1.2e-25	structural protein with Ig domain	head and packaging
UniRef90	UHGV-0137462_16	UniRef90_A0A806LIK8	108.0	4.09e-29	BIG2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0137462_16	1423816.BACQ01000026_gene936	98.2	6.28e-26	Bacterial Ig-like domain 2	N/A
Pfam	UHGV-0137462_16	PF02368	N/A	N/A	Bacterial Ig-like domain (group 2)	Big_2
COG	UHGV-0137462_16	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0137462_16	PF02368,TIGR04225	N/A	N/A	N/A	N/A
PHROG	UHGV-0137462_17	phrog_187	55.6	9.6e-16	head-tail adaptor	connector
eggNOG-mapper	UHGV-0137462_17	1139219.I569_00829	53.1	0.00000024	N/A	N/A
PHROG	UHGV-0137462_18	phrog_1293	1164.8	0	tail length tape measure protein	tail
UniRef90	UHGV-0137462_18	UniRef90_A0A0E2BLH5	1042.0	0	Phage tail length tape-measure protein	N/A
eggNOG-mapper	UHGV-0137462_18	1423816.BACQ01000026_gene933	986.0	0	Phage tail tape measure protein TP901	N/A
Pfam	UHGV-0137462_18	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0137462_18	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0137462_18	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0137462_18	PF10145,TIGR01760	N/A	N/A	N/A	N/A
PHROG	UHGV-0137462_19	phrog_33	61.8	1.7e-17	distal tail protein Dit	tail
UniRef90	UHGV-0137462_19	UniRef90_UPI000C7A8031	94.4	1.17e-19	phage tail protein	N/A
eggNOG-mapper	UHGV-0137462_19	1122147.AUEH01000019_gene957	326.0	0	phage tail	N/A
COG	UHGV-0137462_19	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0137462_19	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0137462_20	phrog_12493	578.7	0	tail protein	tail
UniRef90	UHGV-0137462_20	UniRef90_A0A5P8Q4X0	1587.0	0	SlpA domain-containing protein	N/A
eggNOG-mapper	UHGV-0137462_20	1122147.AUEH01000053_gene2427	1587.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0137462_20	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0137462_20	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0137462_20	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0137462_20	PF14594,PF19087,TIGR01665,NF038016,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0137462_22	phrog_26580	104.3	7.1e-31	N/A	unknown function
UniRef90	UHGV-0137462_22	UniRef90_A0A5P2TVD0	561.0	0	N/A	N/A
eggNOG-mapper	UHGV-0137462_22	1122147.AUEH01000053_gene2426	492.0	0	N/A	N/A
Pfam	UHGV-0137462_22	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
PHROG	UHGV-0137462_25	phrog_134	48.4	0.00000000000014	N/A	unknown function
UniRef90	UHGV-0137462_25	UniRef90_A0A5P8Q3J4	92.4	6.03e-24	XkdX family protein	N/A
eggNOG-mapper	UHGV-0137462_25	1297617.JPJD01000063_gene3069	46.2	0.00000212	Phage uncharacterised protein (Phage_XkdX)	N/A
Pfam	UHGV-0137462_25	PF09693	N/A	N/A	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
PHROG	UHGV-0137462_26	phrog_1009	72.0	5.6e-21	N/A	unknown function
UniRef90	UHGV-0137462_26	UniRef90_S2NA97	102.0	1.71e-26	N/A	N/A
eggNOG-mapper	UHGV-0137462_26	1122147.AUEH01000019_gene964	179.0	0	N/A	N/A
PHROG	UHGV-0137462_27	phrog_10091	147.3	5.74532e-44	holin	lysis
UniRef90	UHGV-0137462_27	UniRef90_A0A5P8M2N3	248.0	0	Phage holin	N/A
eggNOG-mapper	UHGV-0137462_27	1122147.AUEH01000019_gene965	246.0	0	Bacteriophage holin	N/A
Pfam	UHGV-0137462_27	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-0137462_27	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-0137462_27	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0137462_27	PF04531,TIGR01598	N/A	N/A	N/A	N/A
PHROG	UHGV-0137462_28	phrog_13463	209.3	0	endolysin	lysis
UniRef90	UHGV-0137462_28	UniRef90_A0A0R1X7G9	581.0	0	NlpC/P60 domain-containing protein	N/A
eggNOG-mapper	UHGV-0137462_28	1122147.AUEH01000053_gene2421	585.0	0	Bacteriophage peptidoglycan hydrolase	N/A
Pfam	UHGV-0137462_28	PF05382	N/A	N/A	Bacteriophage peptidoglycan hydrolase	Amidase_5
COG	UHGV-0137462_28	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
KOfam	UHGV-0137462_29	K07172	48.3	0.00000000000033	mazE, chpAI; antitoxin MazE	N/A
PHROG	UHGV-0137462_29	phrog_4324	52.1	0.000000000000011	N/A	unknown function
UniRef90	UHGV-0137462_29	UniRef90_A0A0R2BKQ4	53.1	0.000000318	SpoVT-AbrB domain-containing protein	N/A
eggNOG-mapper	UHGV-0137462_29	1114972.AUAW01000014_gene1071	52.0	0.000000144	SpoVT / AbrB like domain	N/A
COG	UHGV-0137462_29	COG2336	N/A	N/A	Antitoxin component MazE of the MazEF toxin-antitoxin module	N/A
KOfam	UHGV-0137462_30	K18841	65.6	5.8e-19	chpB, chpBK; mRNA interferase ChpB [EC:3.1.-.-]	N/A
PHROG	UHGV-0137462_30	phrog_1936	61.4	1.8e-17	MazF-like growth inhibitor	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0137462_30	UniRef90_UPI000704B271	114.0	2.38e-30	type II toxin-antitoxin system PemK/MazF family toxin	N/A
eggNOG-mapper	UHGV-0137462_30	864702.OsccyDRAFT_0642	73.6	0.00000000000000209	PemK-like, MazF-like toxin of type II toxin-antitoxin system	N/A
Pfam	UHGV-0137462_30	PF02452	N/A	N/A	PemK-like, MazF-like toxin of type II toxin-antitoxin system	PemK_toxin
COG	UHGV-0137462_30	COG2337	N/A	N/A	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	N/A
structural_annotation	UHGV-0137462_30	PF02452,NF007386,COG2337	N/A	N/A	N/A	N/A
UniRef90	UHGV-0137462_33	UniRef90_K6RZJ7	81.6	1.92e-18	Na+-transporting malonate decarboxylase, carboxybiotin decarboxylase subunit, madB	N/A
eggNOG-mapper	UHGV-0137462_33	1122147.AUEH01000035_gene597	175.0	0	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0137462	Yes	26,326	47	65	1