vOTU vOTU-103679

vOTU: vOTU-103679

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-103679
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-01494 → vGENUS-03071 → vOTU-103679
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → CAG-177 → CAG-177 sp003514385
Host range breadth	Species
Lifestyle	temperate (evidence: geNomad)

Representative genome
Genome ID	UHGV-0111978
Biosample ID	SAMEA3708620
Genome length (bp)	18,048 bps
CheckV completeness	51.92% (Medium-quality)
CDS count	28
CDS density	90.06%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → CAG-177 → CAG-177 sp003514385	Total connections	642	Host agreement	79.75
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 51.92)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0111978_1	phrog_27545	45.8	0.0000000000013	N/A	unknown function
eggNOG-mapper	UHGV-0111978_1	411471.SUBVAR_06976	55.1	0.00000000686	N/A	N/A
PHROG	UHGV-0111978_2	phrog_918	126.3	7.8e-38	N/A	unknown function
UniRef90	UHGV-0111978_2	UniRef90_UPI000FFEACEB	135.0	9.13001e-40	N/A	N/A
eggNOG-mapper	UHGV-0111978_2	272626.lin0103	133.0	8.86e-40	N/A	N/A
Pfam	UHGV-0111978_2	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-0111978_2	PF19791	N/A	N/A	N/A	N/A
KOfam	UHGV-0111978_3	K01448	119.9	2.8e-35	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0111978_3	phrog_435	152.9	2.8026e-45	endolysin	lysis
UniRef90	UHGV-0111978_3	UniRef90_A0A3D5TMB6	500.0	0	MurNAc-LAA domain-containing protein	N/A
eggNOG-mapper	UHGV-0111978_3	1385512.N784_06480	87.4	1.21e-16	Ami_3	N/A
Pfam	UHGV-0111978_3	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-0111978_3	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0111978_3	PF01520,PF15591,MF_00562,TIGR02883,NF033202,COG0860	N/A	N/A	N/A	N/A
PHROG	UHGV-0111978_4	phrog_263	78.4	6.3e-23	holin	lysis
UniRef90	UHGV-0111978_4	UniRef90_A0A3D5TN47	174.0	0	Phage holin	N/A
eggNOG-mapper	UHGV-0111978_4	1121344.JHZO01000004_gene1372	61.2	0.0000000000399	SPP1 phage holin	N/A
Pfam	UHGV-0111978_4	PF04688	N/A	N/A	SPP1 phage holin	Holin_SPP1
NCBIFam	UHGV-0111978_4	TIGR01592.1	N/A	N/A	phage holin	N/A
structural_annotation	UHGV-0111978_4	PF04688,TIGR01592	N/A	N/A	N/A	N/A
PHROG	UHGV-0111978_6	phrog_2468	103.8	8.7e-31	head morphogenesis	head and packaging
UniRef90	UHGV-0111978_6	UniRef90_A0A3D2MUF2	237.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0111978_6	1111135.HMPREF1248_0663	164.0	3.85357e-43	cell adhesion	N/A
Pfam	UHGV-0111978_6	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-0111978_6	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0111978_6	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0111978_7	phrog_5	49.2	0.00000000000009	tail completion or Neck1 protein	connector
UniRef90	UHGV-0111978_7	UniRef90_A0A6H1MR47	78.2	9.5e-16	Putative tail component	N/A
eggNOG-mapper	UHGV-0111978_7	1504822.CCNO01000013_gene284	73.2	0.00000000000000668	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0111978_7	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0111978_7	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0111978_8	phrog_194	45.7	0.0000000000013	head scaffolding protein	head and packaging
UniRef90	UHGV-0111978_8	UniRef90_A0A6B9SU02	110.0	8.57e-27	Fibronectin autolysin	N/A
structural_annotation	UHGV-0111978_8	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0111978_9	phrog_267	186.9	0	major head protein	head and packaging
UniRef90	UHGV-0111978_9	UniRef90_F8UBM2	280.0	0	p22 coat protein	N/A
eggNOG-mapper	UHGV-0111978_9	673376.F2VHW8_9CAUD	280.0	0	viral capsid	N/A
structural_annotation	UHGV-0111978_9	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0111978_12	phrog_17977	80.3	1.9e-23	N/A	unknown function
UniRef90	UHGV-0111978_12	UniRef90_UPI00141211AB	120.0	3.84e-33	head-tail adaptor protein	N/A
structural_annotation	UHGV-0111978_12	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0111978_13	phrog_17405	49.8	0.000000000000061	head protein	head and packaging
UniRef90	UHGV-0111978_13	UniRef90_A0A415JI88	84.0	1.77e-18	N/A	N/A
structural_annotation	UHGV-0111978_13	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-0111978_14	phrog_885	82.0	6.7e-24	major tail protein	tail
UniRef90	UHGV-0111978_14	UniRef90_A0A843J9F0	213.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0111978_14	1504822.CCNO01000012_gene492	253.0	0	N/A	N/A
structural_annotation	UHGV-0111978_14	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0111978_17	phrog_6900	158.4	0	tail length tape measure protein	tail
UniRef90	UHGV-0111978_17	UniRef90_A0A1P8BMM1	99.0	7.16e-23	Tail tapemeasure protein	N/A
eggNOG-mapper	UHGV-0111978_17	1121334.KB911068_gene2299	129.0	1.81e-32	Phage tail tape measure protein, TP901 family	N/A
COG	UHGV-0111978_17	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0111978_17	PF20155	N/A	N/A	N/A	N/A
PHROG	UHGV-0111978_18	phrog_59	138.3	3.20001e-41	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0111978_18	UniRef90_UPI0007F55685	267.0	0	NUMOD4 motif-containing HNH endonuclease	N/A
eggNOG-mapper	UHGV-0111978_18	146269.A8YQN4_9CAUD	122.0	1.8e-32	HNH endonuclease	N/A
PADLOC	UHGV-0111978_18	HEase_00016	78.9	3.7e-23	homing endonuclease	RM
Pfam	UHGV-0111978_18	PF07463	N/A	N/A	NUMOD4 motif	NUMOD4
Pfam	UHGV-0111978_18	PF13392	N/A	N/A	HNH endonuclease	HNH_3
structural_annotation	UHGV-0111978_18	PF07463,PF07453,TIGR01453	N/A	N/A	N/A	N/A
PHROG	UHGV-0111978_19	phrog_58	119.7	1.2e-36	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0111978_19	545697.HMPREF0216_02861	142.0	3.71e-33	tail tape measure protein	N/A
COG	UHGV-0111978_19	COG5283	N/A	N/A	Phage-related tail protein	N/A
PHROG	UHGV-0111978_20	phrog_33	84.5	2.4e-24	distal tail protein Dit	tail
UniRef90	UHGV-0111978_20	UniRef90_UPI00164BA811	171.0	0	phage tail family protein	N/A
eggNOG-mapper	UHGV-0111978_20	1444306.JFZC01000034_gene2623	166.0	0	tail component	N/A
NCBIFam	UHGV-0111978_20	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
COG	UHGV-0111978_20	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0111978_20	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0111978_21	phrog_1067	372.1	0	minor head protein	head and packaging
UniRef90	UHGV-0111978_21	UniRef90_UPI000CF99656	357.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0111978_21	1160721.RBI_I01574	329.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-0111978_21	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0111978_21	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0111978_21	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0111978_21	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0111978_25	phrog_7339	79.8	3.1e-23	DNA repair exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0111978_25	UniRef90_A0A136Q8Q2	197.0	0	Ser/Thr phosphatase family protein	N/A
eggNOG-mapper	UHGV-0111978_25	443254.Marpi_0340	77.8	0.0000000000000382	metallophosphoesterase	N/A
COG	UHGV-0111978_25	COG1408	N/A	N/A	Predicted phosphohydrolase, MPP superfamily	N/A
structural_annotation	UHGV-0111978_25	PF12850,MF_00325,NF003118,COG1311	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0111978_26	PF04545,MF_00245,NF001074,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-0111978_27	phrog_5978	134.3	7.5e-40	N/A	unknown function
UniRef90	UHGV-0111978_27	UniRef90_A0A2N0UXR1	348.0	0	Adenosine monophosphate-protein transferase SoFic	N/A
eggNOG-mapper	UHGV-0111978_27	936375.HMPREF1152_1541	321.0	0	Filamentation induced by cAMP protein fic	N/A
Pfam	UHGV-0111978_27	PF02661	N/A	N/A	Fic/DOC family	Fic
Pfam	UHGV-0111978_27	PF13412	N/A	N/A	Winged helix-turn-helix DNA-binding	HTH_24
COG	UHGV-0111978_27	COG3177	N/A	N/A	Fic family protein	N/A
structural_annotation	UHGV-0111978_27	PF07183,MF_01911,NF040876,COG3177	N/A	N/A	N/A	N/A
KOfam	UHGV-0111978_28	K14059	159.2	0	int; integrase	N/A
PHROG	UHGV-0111978_28	phrog_1	164.9	0	integrase	integration and excision
UniRef90	UHGV-0111978_28	UniRef90_UPI0005AA7FA8	214.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-0111978_28	1378168.N510_03298	182.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0111978_28	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0111978_28	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0111978_28	PF00589,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0111978	Yes	18,048	46	52	1