vOTU vOTU-103813

vOTU: vOTU-103813

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-103813
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → F23-B02 → F23-B02 sp004556755
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-04889 → vOTU-103813
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → F23-B02 → F23-B02 sp004556755
Host range breadth	Species
Lifestyle	temperate (Evidence: geNomad)

Representative genome
Genome ID	UHGV-0044626
Biosample ID	SAMEA1972381
Genome length (bp)	19,896 bps
CheckV completeness	50.72% (Medium-quality)
CDS count	31
CDS density	93.46%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → F23-B02 → F23-B02 sp004556755	Total connections	21	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → F23-B02 → F23-B02 sp004556755	Total connections	18	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 50.72)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0044626_2	K07448	57.8	2e-16	mrr; restriction system protein	N/A
UniRef90	UHGV-0044626_2	UniRef90_R6IC10	514.0	0	SWIM-type domain-containing protein	N/A
Pfam	UHGV-0044626_2	PF04434	N/A	N/A	SWIM zinc finger	SWIM
Pfam	UHGV-0044626_2	PF04471	N/A	N/A	Restriction endonuclease	Mrr_cat
COG	UHGV-0044626_2	COG0847	N/A	N/A	DNA polymerase III, epsilon subunit or related 3'-5' exonuclease	N/A
KOfam	UHGV-0044626_3	K18830	61.4	2e-17	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0044626_3	phrog_8	48.0	0.00000000000015	transcriptional regulator	transcription regulation
UniRef90	UHGV-0044626_3	UniRef90_R6I1M1	122.0	1.61e-33	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-0044626_3	887325.HMPREF0381_0352	114.0	4.52e-31	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0044626_3	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-0044626_3	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0044626_3	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0044626_6	phrog_7566	97.8	5.4e-29	N/A	unknown function
UniRef90	UHGV-0044626_6	UniRef90_A0A8D9UHC0	125.0	4.66e-35	Recombination enhancement function protein nuclease	N/A
eggNOG-mapper	UHGV-0044626_6	693746.OBV_24070	138.0	6.92003e-41	N/A	N/A
KOfam	UHGV-0044626_9	K04769	48.2	0.00000000000028	spoVT; AbrB family transcriptional regulator, stage V sporulation protein T	N/A
PHROG	UHGV-0044626_9	phrog_4681	41.6	0.000000000015	antitoxin from a toxin-antitoxin system	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0044626_9	UniRef90_UPI001E28BC3F	48.1	0.00000934	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	N/A
eggNOG-mapper	UHGV-0044626_9	985665.HPL003_11280	51.6	0.000000264	Regulators of stationary sporulation gene expression	N/A
Pfam	UHGV-0044626_9	PF04014	N/A	N/A	Antidote-toxin recognition MazE, bacterial antitoxin	MazE_antitoxin
NCBIFam	UHGV-0044626_9	TIGR01439.1	N/A	N/A	transcriptional regulator, AbrB family	N/A
COG	UHGV-0044626_9	COG2002	N/A	N/A	Bifunctional DNA-binding transcriptional regulator of stationary/sporulation/toxin gene expression and antitoxin component of the YhaV-PrlF toxin-antitoxin module	N/A
PHROG	UHGV-0044626_10	phrog_32437	50.6	0.0000000000000061	N/A	unknown function
UniRef90	UHGV-0044626_10	UniRef90_UPI001C036D5E	149.0	2.56998e-42	lytic transglycosylase domain-containing protein	N/A
eggNOG-mapper	UHGV-0044626_10	1274374.CBLK010000053_gene2433	55.1	0.00000156	lytic transglycosylase	N/A
Pfam	UHGV-0044626_10	PF01464	N/A	N/A	Transglycosylase SLT domain	SLT
COG	UHGV-0044626_10	COG0741	N/A	N/A	Soluble lytic murein transglycosylase or regulatory protein s ( may contain LysM/invasin domain)	N/A
PHROG	UHGV-0044626_11	phrog_4292	55.2	9.4e-16	N/A	unknown function
eggNOG-mapper	UHGV-0044626_11	743719.PaelaDRAFT_5640	50.1	0.0000000961	N/A	N/A
PHROG	UHGV-0044626_12	phrog_38338	64.6	1.7e-18	N/A	unknown function
eggNOG-mapper	UHGV-0044626_12	693746.OBV_24020	109.0	1.98e-29	N/A	N/A
PHROG	UHGV-0044626_13	phrog_8470	250.9	0	N/A	unknown function
UniRef90	UHGV-0044626_13	UniRef90_UPI00164B8CC7	288.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0044626_13	1378168.N510_01842	259.0	0	PcfJ-like protein	N/A
Pfam	UHGV-0044626_13	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0044626_13	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-0044626_14	phrog_15609	219.4	0	N/A	unknown function
UniRef90	UHGV-0044626_14	UniRef90_A0A7G9WGA3	148.0	3.55e-38	N/A	N/A
eggNOG-mapper	UHGV-0044626_14	1501230.ET33_21155	164.0	1.4013e-45	N/A	N/A
Pfam	UHGV-0044626_14	PF11300	N/A	N/A	N/A	DUF3102
COG	UHGV-0044626_14	COG0188	N/A	N/A	DNA gyrase/topoisomerase IV, subunit A	N/A
structural_annotation	UHGV-0044626_14	PF11300,PF07321,NF038070	N/A	N/A	N/A	N/A
PHROG	UHGV-0044626_16	phrog_24368	42.9	0.0000000000082	N/A	unknown function
UniRef90	UHGV-0044626_20	UniRef90_A0A415G5B2	83.6	1.6e-18	N/A	N/A
eggNOG-mapper	UHGV-0044626_20	397290.C810_05229	78.2	3.79e-17	N/A	N/A
structural_annotation	UHGV-0044626_20	PF14359,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-0044626_21	phrog_3584	175.2	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0044626_21	UniRef90_I2E8X7	78.6	0.000000000000136	Gp31	N/A
eggNOG-mapper	UHGV-0044626_21	1321814.HMPREF9089_00921	87.8	1.71e-17	N/A	N/A
structural_annotation	UHGV-0044626_21	PF01446,NF041486	N/A	N/A	N/A	N/A
PHROG	UHGV-0044626_23	phrog_1233	56.4	6.3e-16	N/A	unknown function
UniRef90	UHGV-0044626_23	UniRef90_UPI0007C29E84	50.4	0.00000987	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-0044626_23	411490.ANACAC_00786	51.2	0.00000233	N/A	N/A
PHROG	UHGV-0044626_24	phrog_606	58.3	1.2e-16	terminase small subunit	head and packaging
eggNOG-mapper	UHGV-0044626_24	1226322.HMPREF1545_03842	81.6	9.38e-17	DNA-packaging protein gp3	N/A
Pfam	UHGV-0044626_24	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-0044626_24	PF16677	N/A	N/A	N/A	N/A
KOfam	UHGV-0044626_25	K06909	211.5	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0044626_25	phrog_3717	187.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-0044626_25	UniRef90_UPI001105ADB4	593.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0044626_25	1519439.JPJG01000060_gene1885	558.0	0	phage Terminase large subunit	N/A
Pfam	UHGV-0044626_25	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
NCBIFam	UHGV-0044626_25	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0044626_25	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0044626_25	PF04466,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0044626_27	phrog_35275	60.8	1e-17	N/A	unknown function
eggNOG-mapper	UHGV-0044626_27	693746.OBV_23910	82.4	0.00000000000000403	N/A	N/A
PHROG	UHGV-0044626_28	phrog_24113	65.6	5.8e-19	N/A	unknown function
eggNOG-mapper	UHGV-0044626_28	1226322.HMPREF1545_03847	67.4	0.00000000000276	N/A	N/A
structural_annotation	UHGV-0044626_28	PF11133,COG5471	N/A	N/A	N/A	N/A
PHROG	UHGV-0044626_29	phrog_371	115.9	4.2e-34	major head protein	head and packaging
UniRef90	UHGV-0044626_29	UniRef90_A0A1Y4TDW7	223.0	0	Mu-like_gpT domain-containing protein	N/A
eggNOG-mapper	UHGV-0044626_29	1226322.HMPREF1545_03848	274.0	0	N/A	N/A
Pfam	UHGV-0044626_29	PF10124	N/A	N/A	Mu-like prophage major head subunit gpT	Mu-like_gpT
structural_annotation	UHGV-0044626_29	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0044626_30	phrog_156	209.1	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0044626_30	1519439.JPJG01000060_gene1886	452.0	0	N/A	N/A
structural_annotation	UHGV-0044626_30	PF12236,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
KOfam	UHGV-0044626_31	K16628	52.8	0.0000000000000011	COL7A; collagen type VII alpha	N/A
PHROG	UHGV-0044626_31	phrog_12105	69.7	8.7e-21	N/A	unknown function
COG	UHGV-0044626_31	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0044626	Yes	19,896	49	51	1