vOTU vOTU-104556

vOTU: vOTU-104556

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-104556
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00136 → vGENUS-17821 → vOTU-104556
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae
Host range breadth	Family
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0363127
Biosample ID	SAMN11391653
Genome length (bp)	23,631 bps
CheckV completeness	52.60% (Medium-quality)
CDS count	28
CDS density	95.25%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae	Total connections	79	Host agreement	89.87
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia	Total connections	62	Host agreement	80.65

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 52.6)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0363127_1	UniRef90_D7GNV4	138.0	1.95005e-41	Helix-turn-helix	N/A
eggNOG-mapper	UHGV-0363127_1	1235800.C819_01469	101.0	1.03e-27	N/A	N/A
Pfam	UHGV-0363127_1	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0363127_1	PF20075,TIGR03070,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0363127_2	K06400	188.7	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0363127_2	phrog_95	176.3	0	integrase	integration and excision
UniRef90	UHGV-0363127_2	UniRef90_A0A1C5MXG4	516.0	0	Transposon Tn3 resolvase	N/A
eggNOG-mapper	UHGV-0363127_2	697329.Rumal_3466	311.0	0	resolvase	N/A
Pfam	UHGV-0363127_2	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0363127_2	PF07508	N/A	N/A	Recombinase	Recombinase
COG	UHGV-0363127_2	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0363127_2	PF00239,PF07508,NF041201,COG1961	N/A	N/A	N/A	N/A
UniRef90	UHGV-0363127_3	UniRef90_D7GNV5	250.0	0	N/A	N/A
Pfam	UHGV-0363127_3	PF16729	N/A	N/A	N/A	DUF5067
structural_annotation	UHGV-0363127_3	PF16729,MF_00791,COG3353	N/A	N/A	N/A	N/A
PHROG	UHGV-0363127_4	phrog_38	205.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-0363127_4	UniRef90_A0A810QA10	552.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0363127_4	1298920.KI911353_gene2682	501.0	0	TIGRFAM Phage	N/A
NCBIFam	UHGV-0363127_4	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-0363127_4	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0363127_4	PF17289,PF04466,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
PHROG	UHGV-0363127_5	phrog_64	240.2	0	portal protein	head and packaging
UniRef90	UHGV-0363127_5	UniRef90_A0A1C5MXM2	904.0	0	Phage portal protein, SPP1 family	N/A
eggNOG-mapper	UHGV-0363127_5	1121866.AUGK01000003_gene1429	424.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0363127_5	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0363127_5	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0363127_7	phrog_544	83.7	1.8e-24	major head protein	head and packaging
UniRef90	UHGV-0363127_7	UniRef90_A0A099YE35	62.0	0.000000215	Major head protein	N/A
eggNOG-mapper	UHGV-0363127_7	428127.EUBDOL_01555	256.0	0	N/A	N/A
structural_annotation	UHGV-0363127_7	PF06673,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-0363127_8	UniRef90_D7GNV9	207.0	0	Phage QLRG family, putative DNA packaging	N/A
eggNOG-mapper	UHGV-0363127_8	1298920.KI911353_gene2658	55.8	0.0000000117	N/A	N/A
Pfam	UHGV-0363127_8	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-0363127_8	TIGR01560	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0363127_9	1121866.AUGK01000003_gene1432	84.7	3.68e-19	N/A	N/A
UniRef90	UHGV-0363127_10	UniRef90_UPI001BBD4500	65.1	0.000000000499	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0363127_10	1298920.KI911353_gene2654	61.6	0.00000000202	N/A	N/A
PHROG	UHGV-0363127_11	phrog_78	41.1	0.000000000024	tail terminator	connector
eggNOG-mapper	UHGV-0363127_11	1121333.JMLH01000047_gene1014	56.6	0.0000000313	N/A	N/A
structural_annotation	UHGV-0363127_11	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-0363127_12	phrog_158	60.6	3.3e-17	major tail protein	tail
UniRef90	UHGV-0363127_12	UniRef90_D7GNW1	279.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0363127_12	1232453.BAIF02000058_gene1634	106.0	1.59e-27	N/A	N/A
structural_annotation	UHGV-0363127_12	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-0363127_13	UniRef90_A0A1C0ADY7	190.0	0	N/A	N/A
eggNOG-mapper	UHGV-0363127_13	1211844.CBLM010000023_gene988	92.8	4.6e-23	N/A	N/A
Pfam	UHGV-0363127_13	PF16478	N/A	N/A	N/A	DUF5055
structural_annotation	UHGV-0363127_13	PF16478	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0363127_14	1121333.JMLH01000047_gene1011	91.3	1.56e-21	N/A	N/A
PHROG	UHGV-0363127_15	phrog_1535	157.5	0	tail length tape measure protein	tail
UniRef90	UHGV-0363127_15	UniRef90_A0A1C6L0H4	1353.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0363127_15	1121866.AUGK01000003_gene1437	292.0	0	phage tail tape measure protein	N/A
COG	UHGV-0363127_15	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
PHROG	UHGV-0363127_16	phrog_1194	88.5	6e-26	N/A	unknown function
eggNOG-mapper	UHGV-0363127_16	742740.HMPREF9474_03515	115.0	1.41e-31	N/A	N/A
Pfam	UHGV-0363127_16	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0363127_16	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0363127_17	phrog_13879	273.6	0	N/A	unknown function
eggNOG-mapper	UHGV-0363127_17	1235800.C819_00474	487.0	0	N/A	N/A
structural_annotation	UHGV-0363127_17	PF03256,PF16466,PF13550,MF_00813,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0363127_18	phrog_18725	65.1	1.2e-18	N/A	unknown function
eggNOG-mapper	UHGV-0363127_18	585501.HMPREF6123_0822	99.0	1.08e-24	N/A	N/A
PHROG	UHGV-0363127_19	phrog_25620	46.7	0.00000000000015	tail collar fiber protein	tail
eggNOG-mapper	UHGV-0363127_19	365659.smi_0469	57.0	0.000000844	N/A	N/A
UniRef90	UHGV-0363127_20	UniRef90_A0A1C5MZC0	463.0	0	N/A	N/A
eggNOG-mapper	UHGV-0363127_20	1235802.C823_01049	266.0	0	N/A	N/A
Pfam	UHGV-0363127_20	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-0363127_20	PF19789	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0363127_21	97139.C824_00240	125.0	4.75e-34	N/A	N/A
structural_annotation	UHGV-0363127_21	PF05635,NF008912	N/A	N/A	N/A	N/A
KOfam	UHGV-0363127_22	K00986	95.2	6.6e-28	ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]	N/A
PHROG	UHGV-0363127_22	phrog_1423	162.4	0	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0363127_22	UniRef90_A0A1C5MZK8	804.0	0	Retron-type reverse transcriptase	N/A
eggNOG-mapper	UHGV-0363127_22	742740.HMPREF9474_02253	356.0	0	Reverse transcriptase (RNA-dependent DNA polymerase)	N/A
PADLOC	UHGV-0363127_22	icity0040	48.1	2.6e-17	RT (reverse transcriptase)	CRISPR-CAS
Pfam	UHGV-0363127_22	PF00078	N/A	N/A	Reverse transcriptase (RNA-dependent DNA polymerase)	RVT_1
COG	UHGV-0363127_22	COG3344	N/A	N/A	Retron-type reverse transcriptase	N/A
structural_annotation	UHGV-0363127_22	PF00078,MF_01390,TIGR04416,COG3344	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0363127_23	742740.HMPREF9474_02256	67.8	0.000000000000273	N/A	N/A
structural_annotation	UHGV-0363127_23	PF07238	N/A	N/A	N/A	N/A
PHROG	UHGV-0363127_24	phrog_1382	48.8	0.000000000000071	N/A	unknown function
NCBIFam	UHGV-0363127_24	NF040910.1	N/A	N/A	CD1375 family protein	N/A
structural_annotation	UHGV-0363127_24	NF040910	N/A	N/A	N/A	N/A
PHROG	UHGV-0363127_25	phrog_1382	59.9	2.2e-17	N/A	unknown function
eggNOG-mapper	UHGV-0363127_25	665950.HMPREF1025_01332	63.9	0.000000000000438	N/A	N/A
NCBIFam	UHGV-0363127_25	NF040910.1	N/A	N/A	CD1375 family protein	N/A
PHROG	UHGV-0363127_26	phrog_1863	54.9	8.7e-16	N/A	unknown function
eggNOG-mapper	UHGV-0363127_26	1232452.BAIB02000007_gene1606	58.9	0.00000000116	N/A	N/A
KOfam	UHGV-0363127_27	K03749	65.6	7.8e-19	dedD; DedD protein	N/A
PHROG	UHGV-0363127_27	phrog_20388	386.2	0	endolysin	lysis
UniRef90	UHGV-0363127_27	UniRef90_A0A1C5N059	925.0	0	Sporulation-specific N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0363127_27	665956.HMPREF1032_00684	401.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0363127_27	PF01832	N/A	N/A	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	Glucosaminidase
Pfam	UHGV-0363127_27	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-0363127_27	PF05036	N/A	N/A	SPOR domain	SPOR
Pfam	UHGV-0363127_27	PF08230	N/A	N/A	CW_7 repeat	CW_7
COG	UHGV-0363127_27	COG3023	N/A	N/A	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	N/A
structural_annotation	UHGV-0363127_27	PF08230,PF01832,PF10030,NF038016,TIGR02594,COG1705,COG4322	N/A	N/A	N/A	N/A
PHROG	UHGV-0363127_28	phrog_10091	112.4	2.9e-33	holin	lysis
UniRef90	UHGV-0363127_28	UniRef90_D7GNX3	167.0	0	Holin, phage phi LC3 family	N/A
eggNOG-mapper	UHGV-0363127_28	428127.EUBDOL_01206	128.0	9.36e-38	COG5546 Small integral membrane protein	N/A
Pfam	UHGV-0363127_28	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-0363127_28	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-0363127_28	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0363127_28	COG5546	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0363127	Yes	23,631	46	53	1