vOTU vOTU-104783

vOTU: vOTU-104783

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-104783
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → CAG-177 → CAG-177 sp000431775
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00136 → vGENUS-17538 → vOTU-104783
Host lineage	Bacteria → Firmicutes_A
Host range breadth	Phylum
Lifestyle	temperate (Evidence: geNomad)

Representative genome
Genome ID	UHGV-0056095
Biosample ID	SAMEA2142349
Genome length (bp)	36,760 bps
CheckV completeness	81.30% (Medium-quality)
CDS count	52
CDS density	94.55%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A	Total connections	40	Host agreement	60
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → CAG-177 → CAG-177 sp000431775	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 81.3)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0056095_2	UniRef90_D7GXC2	153.0	2.8026e-45	Archaeal holliday junction resolvase (Hjc)	N/A
eggNOG-mapper	UHGV-0056095_2	1449050.JNLE01000003_gene3909	105.0	7.67e-27	Recombination protein U	N/A
structural_annotation	UHGV-0056095_2	PF03838,MF_01490,NF002581,COG1591	N/A	N/A	N/A	N/A
KOfam	UHGV-0056095_3	K18959	188.2	0	uvsW; ATP-dependent DNA helicase UvsW [EC:5.6.2.4]	N/A
PHROG	UHGV-0056095_3	phrog_16	191.5	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0056095_3	UniRef90_A0A849CVE0	696.0	0	DEAD/DEAH box helicase family protein	N/A
eggNOG-mapper	UHGV-0056095_3	1449050.JNLE01000003_gene3908	502.0	0	Type III restriction protein res subunit	N/A
PADLOC	UHGV-0056095_3	mREase_IV_00005	51.4	0.000000000000012	Type IV methyl-directed restriction enzyme	RM
Pfam	UHGV-0056095_3	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
Pfam	UHGV-0056095_3	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-0056095_3	COG1061	N/A	N/A	Superfamily II DNA or RNA helicase	N/A
structural_annotation	UHGV-0056095_3	PF04851,PF16203,MF_01489,TIGR00603,COG1061	N/A	N/A	N/A	N/A
PHROG	UHGV-0056095_5	phrog_1252	463.8	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0056095_5	UniRef90_UPI00189DB5D1	756.0	0	DNA polymerase elongation subunit (family B)	N/A
eggNOG-mapper	UHGV-0056095_5	1121866.AUGK01000003_gene1403	518.0	0	DNA replication proofreading	N/A
COG	UHGV-0056095_5	COG0417	N/A	N/A	DNA polymerase B elongation subunit	N/A
structural_annotation	UHGV-0056095_5	PF08490,MF_04100,TIGR00592,COG0417	N/A	N/A	N/A	N/A
PHROG	UHGV-0056095_6	phrog_799	191.0	0	DNA methyltransferase	other
UniRef90	UHGV-0056095_6	UniRef90_A0A373KMH1	263.0	0	NAD(P)-dependent oxidoreductase	N/A
eggNOG-mapper	UHGV-0056095_6	1123263.AUKY01000096_gene1823	243.0	0	DNA restriction-modification system	N/A
COG	UHGV-0056095_6	COG0827	N/A	N/A	Adenine-specific DNA N6-methylase	N/A
structural_annotation	UHGV-0056095_6	PF19587,MF_01872,NF011489,COG0286	N/A	N/A	N/A	N/A
PHROG	UHGV-0056095_7	phrog_155	80.7	2e-23	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0056095_7	UniRef90_UPI001A9A8367	193.0	0	ERF family protein	N/A
eggNOG-mapper	UHGV-0056095_7	272563.CD630_29440	98.6	1.48e-22	ERF superfamily	N/A
Pfam	UHGV-0056095_7	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-0056095_7	PF04404	N/A	N/A	N/A	N/A
PHROG	UHGV-0056095_8	phrog_434	96.2	3.2e-28	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0056095_8	UniRef90_A0A1C6L0E5	461.0	0	Putative phage-type endonuclease	N/A
eggNOG-mapper	UHGV-0056095_8	1219626.HMPREF1639_07320	345.0	0	YqaJ viral recombinase family	N/A
Pfam	UHGV-0056095_8	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
COG	UHGV-0056095_8	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-0056095_8	PF09588,TIGR03033,COG5377	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0056095_9	PF05037,NF005674	N/A	N/A	N/A	N/A
PHROG	UHGV-0056095_10	phrog_18716	149.4	5.60519e-45	N/A	unknown function
UniRef90	UHGV-0056095_10	UniRef90_A0A7X7HJW5	199.0	0	N/A	N/A
eggNOG-mapper	UHGV-0056095_10	1508644.SFBmNL_00403	117.0	1.56e-31	N/A	N/A
Pfam	UHGV-0056095_10	PF18909	N/A	N/A	dATP/dGTP diphosphohydrolase, N-terminal	dGTP_diPhyd_N
structural_annotation	UHGV-0056095_10	PF18909	N/A	N/A	N/A	N/A
KOfam	UHGV-0056095_12	K03698	57.6	2.3e-16	cbf, cbf1; 3'-5' exoribonuclease [EC:3.1.-.-]	N/A
PHROG	UHGV-0056095_12	phrog_5889	105.0	5.7e-31	N/A	unknown function
UniRef90	UHGV-0056095_12	UniRef90_A0A1C5MUY3	213.0	0	Predicted HD-superfamily hydrolase	N/A
eggNOG-mapper	UHGV-0056095_12	1219626.HMPREF1639_07345	171.0	0	metal-dependent phosphohydrolase, HD sub domain	N/A
COG	UHGV-0056095_12	COG3481	N/A	N/A	3'-5' exoribonuclease YhaM, can participate in 23S rRNA maturation, HD superfamily	N/A
structural_annotation	UHGV-0056095_12	PF01966,MF_01427,NF010007,COG3481	N/A	N/A	N/A	N/A
KOfam	UHGV-0056095_13	K03465	185.3	0	thyX, thy1; thymidylate synthase (FAD) [EC:2.1.1.148]	N/A
PHROG	UHGV-0056095_13	phrog_85	133.4	1.6e-39	thymidylate synthase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0056095_13	UniRef90_A0A1Y3WR29	313.0	0	Thymidylate synthase (FAD)	N/A
eggNOG-mapper	UHGV-0056095_13	720554.Clocl_3035	279.0	0	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant	N/A
Pfam	UHGV-0056095_13	PF02511	N/A	N/A	Thymidylate synthase complementing protein	Thy1
NCBIFam	UHGV-0056095_13	TIGR02170.1	N/A	N/A	FAD-dependent thymidylate synthase	N/A
COG	UHGV-0056095_13	COG1351	N/A	N/A	Thymidylate synthase ThyX, FAD-dependent family	N/A
structural_annotation	UHGV-0056095_13	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
PHROG	UHGV-0056095_14	phrog_1829	136.9	1.10001e-40	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0056095_14	UniRef90_UPI001899186E	336.0	0	primase C-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-0056095_14	1121866.AUGK01000003_gene1409	217.0	0	Phage plasmid primase, P4 family domain protein	N/A
Pfam	UHGV-0056095_14	PF08708	N/A	N/A	Primase C terminal 1 (PriCT-1)	PriCT_1
COG	UHGV-0056095_14	COG4983	N/A	N/A	Primase-polymerase (Primpol) domain protein	N/A
structural_annotation	UHGV-0056095_14	PF08708,PF09250,COG4983	N/A	N/A	N/A	N/A
PHROG	UHGV-0056095_20	phrog_1156	306.5	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0056095_20	UniRef90_H1CER1	761.0	0	Phage/plasmid primase, P4 family domain-containing protein	N/A
eggNOG-mapper	UHGV-0056095_20	649747.HMPREF0083_00553	330.0	0	Phage plasmid primase, P4 family	N/A
Pfam	UHGV-0056095_20	PF08706	N/A	N/A	D5 N terminal like	D5_N
Pfam	UHGV-0056095_20	PF19263	N/A	N/A	N/A	DUF5906
Pfam	UHGV-0056095_20	PF03288	N/A	N/A	Poxvirus D5 protein-like	Pox_D5
NCBIFam	UHGV-0056095_20	TIGR01613.1	N/A	N/A	phage/plasmid primase, P4 family	N/A
COG	UHGV-0056095_20	COG3378	N/A	N/A	DNA primase, phage- or plasmid-associated	N/A
structural_annotation	UHGV-0056095_20	PF08706,PF05272,PF02257,MF_04000,NF005477,COG3378	N/A	N/A	N/A	N/A
PHROG	UHGV-0056095_21	phrog_606	48.8	0.000000000000053	terminase small subunit	head and packaging
UniRef90	UHGV-0056095_21	UniRef90_UPI001D08D6B6	184.0	0	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-0056095_21	877421.AUJT01000054_gene66	52.4	0.00000313	N/A	N/A
Pfam	UHGV-0056095_21	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-0056095_21	PF16677	N/A	N/A	N/A	N/A
KOfam	UHGV-0056095_22	K03466	239.9	0	ftsK, spoIIIE; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family	N/A
PHROG	UHGV-0056095_22	phrog_1358	206.3	0	FtsK/SpoIIIE-like protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0056095_22	UniRef90_A0A1C5UE43	254.0	0	Stage III sporulation protein E	N/A
eggNOG-mapper	UHGV-0056095_22	511437.Lbuc_0683	164.0	1.70958e-43	Belongs to the FtsK SpoIIIE SftA family	N/A
PADLOC	UHGV-0056095_22	SspH_00004	113.9	1.1e-33	SspH	SSP
Pfam	UHGV-0056095_22	PF01580	N/A	N/A	FtsK/SpoIIIE family	FtsK_SpoIIIE
COG	UHGV-0056095_22	COG1674	N/A	N/A	DNA segregation ATPase FtsK/SpoIIIE or related protein	N/A
structural_annotation	UHGV-0056095_22	PF01580,MF_01076,NF010404,COG0433	N/A	N/A	N/A	N/A
UniRef90	UHGV-0056095_24	UniRef90_A0A417DZ16	60.8	0.000000000114	HTH cro/C1-type domain-containing protein	N/A
structural_annotation	UHGV-0056095_24	PF20075,TIGR02612,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0056095_25	phrog_130	116.2	3.6e-34	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0056095_25	UniRef90_A0A6I2QQL6	115.0	1.15e-27	Phage antirepressor Ant	N/A
eggNOG-mapper	UHGV-0056095_25	1227268.HMPREF1552_01581	122.0	3.58e-31	BRO family, N-terminal domain	N/A
Pfam	UHGV-0056095_25	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
COG	UHGV-0056095_25	COG3617	N/A	N/A	Prophage antirepressor	N/A
KOfam	UHGV-0056095_26	K14060	144.2	1.10002e-42	pinR; putative DNA-invertase from lambdoid prophage Rac	N/A
PHROG	UHGV-0056095_26	phrog_125	163.2	0	DNA invertase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0056095_26	UniRef90_UPI001C023A41	193.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-0056095_26	1408423.JHYA01000001_gene988	189.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0056095_26	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
COG	UHGV-0056095_26	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0056095_26	PF00239,PF02796,MF_00489,NF009949,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-0056095_28	phrog_38	208.1	0	terminase large subunit	head and packaging
UniRef90	UHGV-0056095_28	UniRef90_A0A318EQM2	468.0	0	Putative phage terminase large subunit-like protein	N/A
eggNOG-mapper	UHGV-0056095_28	1123263.AUKY01000015_gene1608	543.0	0	chromosome segregation	N/A
Pfam	UHGV-0056095_28	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
NCBIFam	UHGV-0056095_28	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-0056095_28	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0056095_28	PF17289,PF02562,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
PHROG	UHGV-0056095_29	phrog_64	236.8	0	portal protein	head and packaging
UniRef90	UHGV-0056095_29	UniRef90_UPI00189F3DE6	564.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0056095_29	1121866.AUGK01000003_gene1429	387.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0056095_29	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0056095_29	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0056095_30	phrog_115	41.1	0.000000000027	minor head protein	head and packaging
UniRef90	UHGV-0056095_30	UniRef90_A0A3D3Y4T2	97.4	1.29e-21	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0056095_30	1118054.CAGW01000097_gene4770	53.9	0.00000789	Phage Mu protein F like protein	N/A
Pfam	UHGV-0056095_30	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-0056095_30	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0056095_30	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0056095_33	phrog_1328	116.1	2.4e-34	major head protein	head and packaging
UniRef90	UHGV-0056095_33	UniRef90_UPI00164DD2D5	529.0	0	N/A	N/A
eggNOG-mapper	UHGV-0056095_33	665956.HMPREF1032_03619	228.0	0	N/A	N/A
Pfam	UHGV-0056095_33	PF17236	N/A	N/A	N/A	DUF5309
structural_annotation	UHGV-0056095_33	PF17236,MF_04119,NF041162,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-0056095_34	UniRef90_UPI001A9BF680	112.0	3.22e-30	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-0056095_34	1298920.KI911353_gene2658	62.8	0.0000000000274	N/A	N/A
Pfam	UHGV-0056095_34	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-0056095_34	TIGR01560	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0056095_35	1121866.AUGK01000003_gene1432	85.5	1.27e-19	N/A	N/A
structural_annotation	UHGV-0056095_37	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-0056095_38	phrog_158	63.3	5e-18	major tail protein	tail
UniRef90	UHGV-0056095_38	UniRef90_A0A1C6L0H9	216.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0056095_38	1232453.BAIF02000058_gene1634	100.0	2.3e-25	N/A	N/A
Pfam	UHGV-0056095_38	PF08813	N/A	N/A	Phage tail tube protein, TTP	Phage_tail_3
structural_annotation	UHGV-0056095_38	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-0056095_39	UniRef90_A0A847YX95	158.0	0	N/A	N/A
eggNOG-mapper	UHGV-0056095_39	469596.HMPREF9488_01311	92.8	4.6e-23	N/A	N/A
Pfam	UHGV-0056095_39	PF16478	N/A	N/A	N/A	DUF5055
structural_annotation	UHGV-0056095_39	PF16478	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0056095_40	1121333.JMLH01000047_gene1011	80.1	4.04e-17	N/A	N/A
PHROG	UHGV-0056095_41	phrog_1535	102.3	0	tail length tape measure protein	tail
UniRef90	UHGV-0056095_41	UniRef90_A0A173WM72	89.7	0.0000000000000152	Phage-related protein	N/A
eggNOG-mapper	UHGV-0056095_41	1121866.AUGK01000003_gene1437	217.0	0	phage tail tape measure protein	N/A
COG	UHGV-0056095_41	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
structural_annotation	UHGV-0056095_41	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0056095_42	phrog_1194	106.2	1.8e-31	N/A	unknown function
UniRef90	UHGV-0056095_42	UniRef90_A0A4U9RD70	83.2	3.66e-18	Lj965 prophage protein	N/A
eggNOG-mapper	UHGV-0056095_42	469596.HMPREF9488_01317	85.1	1.27e-19	N/A	N/A
Pfam	UHGV-0056095_42	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0056095_42	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0056095_43	phrog_5555	44.4	0.0000000000015	tail protein	tail
eggNOG-mapper	UHGV-0056095_43	1121333.JMLH01000047_gene1007	117.0	6.01e-24	N/A	N/A
UniRef90	UHGV-0056095_46	UniRef90_UPI001956EB51	102.0	1.18e-22	leucine-rich repeat protein	N/A
eggNOG-mapper	UHGV-0056095_46	553177.CAPSP0001_1731	61.6	0.0000000227	COG3209 Rhs family protein	N/A
Pfam	UHGV-0056095_46	PF13306	N/A	N/A	BspA type Leucine rich repeat region (6 copies)	LRR_5
COG	UHGV-0056095_46	COG3209	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0056095_46	PF13306	N/A	N/A	N/A	N/A
PHROG	UHGV-0056095_48	phrog_27545	106.9	1.7e-31	N/A	unknown function
UniRef90	UHGV-0056095_48	UniRef90_R6ELD6	95.5	1.86e-22	Glycosyl hydrolase family 18 family protein	N/A
eggNOG-mapper	UHGV-0056095_48	411471.SUBVAR_06976	114.0	1.57e-30	N/A	N/A
PHROG	UHGV-0056095_49	phrog_1863	72.6	2.8e-21	N/A	unknown function
eggNOG-mapper	UHGV-0056095_49	665956.HMPREF1032_02709	94.4	3.67e-24	N/A	N/A
PHROG	UHGV-0056095_51	phrog_36029	76.2	5.2e-22	N/A	unknown function
UniRef90	UHGV-0056095_51	UniRef90_A0A345BPS8	76.3	0.00000000000000102	Holin of superfamily 6	N/A
eggNOG-mapper	UHGV-0056095_51	411468.CLOSCI_01511	76.6	1.41e-16	N/A	N/A
structural_annotation	UHGV-0056095_51	PF09682	N/A	N/A	N/A	N/A
KOfam	UHGV-0056095_52	K19304	90.3	2.5e-26	mepM; murein DD-endopeptidase [EC:3.4.24.-]	N/A
PHROG	UHGV-0056095_52	phrog_7767	72.4	5.8e-21	metallo-endopeptidase	other
UniRef90	UHGV-0056095_52	UniRef90_R6NC85	494.0	0	M48 family peptidase	N/A
eggNOG-mapper	UHGV-0056095_52	33035.JPJF01000048_gene719	82.0	0.00000000000000236	Peptidase family M23	N/A
Pfam	UHGV-0056095_52	PF01551	N/A	N/A	Peptidase family M23	Peptidase_M23
COG	UHGV-0056095_52	COG5263	N/A	N/A	Glucan-binding domain (YG repeat)	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0056095	Yes	36,760	46	81	1