vOTU vOTU-105244

vOTU: vOTU-105244

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-105244
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → TANB77 → CAG-508 → CAG-273 → CAG-273 sp000435755
Taxonomy (UHGV)	vFAM-00001 → vSUBFAM-00788 → vGENUS-01308 → vOTU-105244
Host lineage	Bacteria → Firmicutes_A → Clostridia → TANB77 → CAG-508 → CAG-273 → CAG-273 sp000435755
Host range breadth	Species
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0115705
Biosample ID	SAMEA3888912
Genome length (bp)	30,190 bps
CheckV completeness	63.63% (Medium-quality)
CDS count	40
CDS density	92.78%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage		Total connections		Host agreement
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → TANB77 → CAG-508 → CAG-273 → CAG-273 sp000435755	Total connections	195	Host agreement	89.23

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 63.63)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0115705_1	UniRef90_A0A3R6UMS9	369.0	0	N/A	N/A
eggNOG-mapper	UHGV-0115705_1	742740.HMPREF9474_03582	119.0	1.56e-28	N/A	N/A
PHROG	UHGV-0115705_2	phrog_909	111.1	5.7e-33	major head protein	head and packaging
UniRef90	UHGV-0115705_2	UniRef90_R7FKI7	165.0	0	N/A	N/A
eggNOG-mapper	UHGV-0115705_2	1078085.HMPREF1210_01145	118.0	2.66e-33	N/A	N/A
structural_annotation	UHGV-0115705_2	PF02924	N/A	N/A	N/A	N/A
PHROG	UHGV-0115705_3	phrog_29	233.8	0	major head protein	head and packaging
UniRef90	UHGV-0115705_3	UniRef90_R7FCP0	526.0	0	N/A	N/A
eggNOG-mapper	UHGV-0115705_3	1296662.S5MP36_9CAUD	395.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-0115705_3	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-0115705_3	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-0115705_4	UniRef90_R7FAI5	58.9	0.0000000474	Rho_N domain-containing protein	N/A
PHROG	UHGV-0115705_6	phrog_615	115.9	2e-34	head-tail adaptor	connector
UniRef90	UHGV-0115705_6	UniRef90_R7F9G0	162.0	0	N/A	N/A
eggNOG-mapper	UHGV-0115705_6	357809.Cphy_2962	120.0	9.49e-34	N/A	N/A
structural_annotation	UHGV-0115705_6	PF12206,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0115705_7	phrog_5	53.8	0.0000000000000046	tail completion or Neck1 protein	connector
UniRef90	UHGV-0115705_7	UniRef90_UPI0003672CDC	193.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0115705_7	1123511.KB905868_gene178	193.0	0	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0115705_7	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0115705_7	PF04883,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0115705_8	phrog_525	83.1	3.3e-24	N/A	unknown function
UniRef90	UHGV-0115705_8	UniRef90_R6YTI0	193.0	0	N/A	N/A
eggNOG-mapper	UHGV-0115705_8	696281.Desru_1313	81.3	1.51e-17	N/A	N/A
Pfam	UHGV-0115705_8	PF20765	N/A	N/A	N/A	DUF6838
structural_annotation	UHGV-0115705_8	PF20765,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-0115705_9	phrog_966	69.9	1.9e-20	N/A	unknown function
UniRef90	UHGV-0115705_9	UniRef90_T3DFM8	48.1	0.00000606	Putative phage protein	N/A
eggNOG-mapper	UHGV-0115705_9	1151292.QEW_1341	48.1	0.00000102	N/A	N/A
PHROG	UHGV-0115705_10	phrog_279	375.3	0	tail sheath	tail
UniRef90	UHGV-0115705_10	UniRef90_A0A354MD75	624.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0115705_10	696281.Desru_1315	491.0	0	PFAM Phage tail sheath protein	N/A
Pfam	UHGV-0115705_10	PF17481	N/A	N/A	Phage tail sheath protein beta-sandwich domain	Phage_sheath_1N
Pfam	UHGV-0115705_10	PF04984	N/A	N/A	Phage tail sheath protein subtilisin-like domain	Phage_sheath_1
Pfam	UHGV-0115705_10	PF17482	N/A	N/A	Phage tail sheath C-terminal domain	Phage_sheath_1C
structural_annotation	UHGV-0115705_10	PF17482,PF04984,PF17481,COG4386	N/A	N/A	N/A	N/A
PHROG	UHGV-0115705_11	phrog_365	174.5	0	tail protein	tail
UniRef90	UHGV-0115705_11	UniRef90_R7FA15	301.0	0	N/A	N/A
eggNOG-mapper	UHGV-0115705_11	357809.Cphy_2957	214.0	0	Phage tail tube protein	N/A
Pfam	UHGV-0115705_11	PF09393	N/A	N/A	Phage tail tube protein	DUF2001
structural_annotation	UHGV-0115705_11	PF09393,TIGR02241,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0115705_12	phrog_389	120.0	1.4e-35	tail protein XkdN-like	tail
UniRef90	UHGV-0115705_12	UniRef90_R7FCP8	247.0	0	Phage XkdN-like protein	N/A
eggNOG-mapper	UHGV-0115705_12	1274374.CBLK010000063_gene812	91.3	1.07e-21	Phage portal protein	N/A
Pfam	UHGV-0115705_12	PF08890	N/A	N/A	Phage XkdN-like tail assembly chaperone protein, TAC	Phage_TAC_5
structural_annotation	UHGV-0115705_12	PF08890,COG4518	N/A	N/A	N/A	N/A
PHROG	UHGV-0115705_13	phrog_1068	556.6	0	tail length tape measure protein	tail
UniRef90	UHGV-0115705_13	UniRef90_A0A354MD72	693.0	0	TMP_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0115705_13	610130.Closa_1404	297.0	0	tape measure	N/A
Pfam	UHGV-0115705_13	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0115705_13	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0115705_13	COG5281	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-0115705_13	PF20155,COG3941	N/A	N/A	N/A	N/A
KOfam	UHGV-0115705_14	K22409	46.4	0.00000000000051	sle1; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0115705_14	phrog_380	236.2	0	endolysin	lysis
UniRef90	UHGV-0115705_14	UniRef90_R7A479	407.0	0	LysM domain	N/A
eggNOG-mapper	UHGV-0115705_14	742740.HMPREF9474_02343	239.0	0	Lysin motif	N/A
Pfam	UHGV-0115705_14	PF01476	N/A	N/A	LysM domain	LysM
COG	UHGV-0115705_14	COG1652	N/A	N/A	Cytoplasmic potassium-binding protein Kbp/XkdP/YgaU, contains LysM domain	N/A
structural_annotation	UHGV-0115705_14	PF21821,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0115705_15	phrog_400	333.3	0	tail protein	tail
UniRef90	UHGV-0115705_15	UniRef90_A0A354MD70	513.0	0	Hydrolase	N/A
eggNOG-mapper	UHGV-0115705_15	742740.HMPREF9474_02342	415.0	0	PFAM Phage late control gene D protein (GPD)	N/A
COG	UHGV-0115705_15	COG4193	N/A	N/A	Beta- N-acetylglucosaminidase	N/A
structural_annotation	UHGV-0115705_15	PF14594,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0115705_16	phrog_579	95.2	1.1e-28	N/A	unknown function
UniRef90	UHGV-0115705_16	UniRef90_A0A417K794	110.0	1.69e-27	N/A	N/A
eggNOG-mapper	UHGV-0115705_16	642492.Clole_2743	90.5	1.41e-20	N/A	N/A
Pfam	UHGV-0115705_16	PF10844	N/A	N/A	N/A	DUF2577
structural_annotation	UHGV-0115705_16	PF10844	N/A	N/A	N/A	N/A
PHROG	UHGV-0115705_17	phrog_120	85.0	6.7e-25	baseplate protein	tail
UniRef90	UHGV-0115705_17	UniRef90_R6YTF8	213.0	0	Putative phage protein	N/A
eggNOG-mapper	UHGV-0115705_17	1411095.X5JB38_9CAUD	149.0	1.96182e-44	lytic transglycosylase activity	N/A
Pfam	UHGV-0115705_17	PF10934	N/A	N/A	N/A	DUF2634
structural_annotation	UHGV-0115705_17	PF10934,MF_02010,TIGR03357,COG3628	N/A	N/A	N/A	N/A
PHROG	UHGV-0115705_18	phrog_6	182.7	0	baseplate protein	tail
UniRef90	UHGV-0115705_18	UniRef90_R6Z8F5	600.0	0	Baseplate J family protein	N/A
eggNOG-mapper	UHGV-0115705_18	642492.Clole_2741	343.0	0	baseplate J-like protein	N/A
Pfam	UHGV-0115705_18	PF04865	N/A	N/A	Baseplate J-like protein	Baseplate_J
COG	UHGV-0115705_18	COG3299	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0115705_18	PF04865,PF21379,MF_04102,TIGR02243,COG3299	N/A	N/A	N/A	N/A
PHROG	UHGV-0115705_19	phrog_521	91.1	1.1e-26	tail protein	tail
UniRef90	UHGV-0115705_19	UniRef90_UPI000374DFF6	78.6	0.0000000000000469	N/A	N/A
eggNOG-mapper	UHGV-0115705_19	1122925.KB895376_gene796	78.6	0.00000000000000787	N/A	N/A
Pfam	UHGV-0115705_19	PF10076	N/A	N/A	Bacteriophage Mu-like, Gp48	Phage_Mu_Gp48
COG	UHGV-0115705_19	COG4385	N/A	N/A	Bacteriophage P2-related tail formation protein	N/A
structural_annotation	UHGV-0115705_19	PF10076,TIGR02242,COG3778	N/A	N/A	N/A	N/A
PHROG	UHGV-0115705_20	phrog_5302	195.7	0	tail protein	tail
UniRef90	UHGV-0115705_20	UniRef90_A0A845LFH6	214.0	0	BppU family phage baseplate upper protein	N/A
eggNOG-mapper	UHGV-0115705_20	411470.RUMGNA_00248	265.0	0	Phage tail-collar fibre protein	N/A
Pfam	UHGV-0115705_20	PF12571	N/A	N/A	Phage tail-collar fibre protein	DUF3751
COG	UHGV-0115705_20	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
structural_annotation	UHGV-0115705_20	PF12571,COG1262	N/A	N/A	N/A	N/A
KOfam	UHGV-0115705_21	K00986	76.8	3.2e-22	ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]	N/A
PHROG	UHGV-0115705_21	phrog_1423	144.0	1.3004e-42	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0115705_21	UniRef90_R6Z282	281.0	0	Putative reverse transcriptase	N/A
eggNOG-mapper	UHGV-0115705_21	755164.D6PSR5_9CAUD	170.0	0	RNA-directed DNA polymerase activity	N/A
PADLOC	UHGV-0115705_21	icity0040	60.0	7.8e-17	RT (reverse transcriptase)	CRISPR-CAS
structural_annotation	UHGV-0115705_21	TIGR04416,COG3344	N/A	N/A	N/A	N/A
KOfam	UHGV-0115705_22	K00986	55.7	7.6e-16	ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]	N/A
PHROG	UHGV-0115705_22	phrog_1423	96.6	3e-28	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0115705_22	UniRef90_A0A1J4Z1Q9	77.0	6.44e-16	Reverse transcriptase domain-containing protein	N/A
eggNOG-mapper	UHGV-0115705_22	411468.CLOSCI_01505	95.1	7.05e-22	Reverse transcriptase (RNA-dependent DNA polymerase)	N/A
PADLOC	UHGV-0115705_22	drt-UG26	45.5	0.0000000000016	DRT	DRT
Pfam	UHGV-0115705_22	PF00078	N/A	N/A	Reverse transcriptase (RNA-dependent DNA polymerase)	RVT_1
COG	UHGV-0115705_22	COG3344	N/A	N/A	Retron-type reverse transcriptase	N/A
PHROG	UHGV-0115705_23	phrog_4912	54.5	0.0000000000000021	tail fiber assembly	tail
UniRef90	UHGV-0115705_23	UniRef90_A0A843GPS8	100.0	7.88e-24	Phage tail assembly chaperone	N/A
Pfam	UHGV-0115705_23	PF16778	N/A	N/A	Phage tail assembly chaperone protein	Phage_tail_APC
structural_annotation	UHGV-0115705_23	PF16778	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0115705_26	PF06946	N/A	N/A	N/A	N/A
KOfam	UHGV-0115705_27	K01447	118.4	8.4e-35	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0115705_27	phrog_16241	144.9	4.90454e-43	endolysin	lysis
UniRef90	UHGV-0115705_27	UniRef90_A0A1C5M3B3	179.0	0	N-acetylmuramoyl-L-alanine amidase XlyA	N/A
eggNOG-mapper	UHGV-0115705_27	1120998.AUFC01000015_gene1630	164.0	0	Ami_2	N/A
Pfam	UHGV-0115705_27	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-0115705_27	PF08230	N/A	N/A	CW_7 repeat	CW_7
COG	UHGV-0115705_27	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-0115705_27	PF01510,MF_04111,NF008758,COG3023	N/A	N/A	N/A	N/A
KOfam	UHGV-0115705_28	K03555	41.0	0.00000000000019	mutS; DNA mismatch repair protein MutS	N/A
UniRef90	UHGV-0115705_28	UniRef90_R7F9J1	239.0	0	DNA mismatch repair protein MutS	N/A
eggNOG-mapper	UHGV-0115705_28	759914.BP951000_1316	58.9	0.0000000286	This protein is involved in the repair of mismatches in DNA	N/A
Pfam	UHGV-0115705_28	PF01624	N/A	N/A	MutS domain I	MutS_I
COG	UHGV-0115705_28	COG0249	N/A	N/A	DNA mismatch repair ATPase MutS	N/A
structural_annotation	UHGV-0115705_28	PF01624,NF006536	N/A	N/A	N/A	N/A
KOfam	UHGV-0115705_29	K07727	55.6	0.0000000000000015	K07727; putative transcriptional regulator	N/A
UniRef90	UHGV-0115705_29	UniRef90_R7FA37	137.0	7.39998e-41	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0115705_29	1347392.CCEZ01000043_gene479	52.4	0.0000000351	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0115705_29	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-0115705_29	PF13443,NF000090,COG3655	N/A	N/A	N/A	N/A
AcrCatalog	UHGV-0115705_31	cluster_94195	80.9	3.23e-24	NA	N/A
KOfam	UHGV-0115705_32	K06173	252.7	0	truA, PUS1; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]	N/A
PHROG	UHGV-0115705_32	phrog_24931	239.5	0	N/A	unknown function
UniRef90	UHGV-0115705_32	UniRef90_R6Q577	482.0	0	tRNA pseudouridine synthase A	N/A
eggNOG-mapper	UHGV-0115705_32	1304284.L21TH_0926	270.0	0	Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs	N/A
Pfam	UHGV-0115705_32	PF01416	N/A	N/A	tRNA pseudouridine synthase	PseudoU_synth_1
NCBIFam	UHGV-0115705_32	TIGR00071.1	N/A	N/A	tRNA pseudouridine(38-40) synthase TruA	N/A
COG	UHGV-0115705_32	COG0101	N/A	N/A	tRNA U38,U39,U40 pseudouridine synthase TruA	N/A
HAMAP	UHGV-0115705_32	MF_00171	N/A	N/A	tRNA pseudouridine synthase A [truA]	N/A
structural_annotation	UHGV-0115705_32	PF01416,MF_00171,TIGR00071,COG0101	N/A	N/A	N/A	N/A
Pfam	UHGV-0115705_33	PF10852	N/A	N/A	N/A	DUF2651
KOfam	UHGV-0115705_34	K02279	40.2	0.000000000048	cpaB, rcpC; pilus assembly protein CpaB	N/A
UniRef90	UHGV-0115705_34	UniRef90_R6Q7U0	576.0	0	Zinc metalloprotease ZmpB	N/A
eggNOG-mapper	UHGV-0115705_34	1089548.KI783301_gene2467	139.0	1.07e-35	SAF	N/A
COG	UHGV-0115705_34	COG3745	N/A	N/A	Flp pilus assembly protein CpaB	N/A
eggNOG-mapper	UHGV-0115705_35	717605.Theco_4025	96.7	1.49e-21	Involved in chromosome partitioning	N/A
COG	UHGV-0115705_35	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
UniRef90	UHGV-0115705_36	UniRef90_R7F5J9	184.0	0	AAA_31 domain-containing protein	N/A
eggNOG-mapper	UHGV-0115705_36	509191.AEDB02000088_gene2652	121.0	3.45e-30	Involved in chromosome partitioning	N/A
COG	UHGV-0115705_36	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
KOfam	UHGV-0115705_37	K02283	65.9	5.9e-19	cpaF, tadA; pilus assembly protein CpaF [EC:7.4.2.8]	N/A
UniRef90	UHGV-0115705_37	UniRef90_R6Q582	767.0	0	AAA ATPase	N/A
eggNOG-mapper	UHGV-0115705_37	1157490.EL26_13615	426.0	0	Pilus assembly protein	N/A
COG	UHGV-0115705_37	COG4962	N/A	N/A	Pilus assembly protein, ATPase of CpaF family	N/A
KOfam	UHGV-0115705_38	K02283	51.6	0.000000000000013	cpaF, tadA; pilus assembly protein CpaF [EC:7.4.2.8]	N/A
UniRef90	UHGV-0115705_38	UniRef90_R6QFT9	527.0	0	AAA ATPase	N/A
eggNOG-mapper	UHGV-0115705_38	1089548.KI783301_gene2464	299.0	0	Pilus assembly protein	N/A
COG	UHGV-0115705_38	COG4962	N/A	N/A	Pilus assembly protein, ATPase of CpaF family	N/A
KOfam	UHGV-0115705_39	K12511	41.1	6.9e-17	tadC; tight adherence protein C	N/A
eggNOG-mapper	UHGV-0115705_39	1157490.EL26_13610	473.0	0	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0115705	Yes	30,190	29	64	1