vOTU vOTU-105418

vOTU: vOTU-105418

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-105418
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00020 → vGENUS-00411 → vOTU-105418
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae
Host range breadth	Family
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1429071
Biosample ID	N/A
Genome length (bp)	31,227 bps
CheckV completeness	73.72% (Medium-quality)
CDS count	54
CDS density	97.22%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae	Total connections	81	Host agreement	85.19
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia	Total connections	3	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 73.72)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-1429071_1	1226322.HMPREF1545_00079	94.7	1.53e-23	N/A	N/A
structural_annotation	UHGV-1429071_2	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-1429071_3	phrog_20016	193.1	0	N/A	unknown function
UniRef90	UHGV-1429071_3	UniRef90_A0A285PT46	182.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-1429071_3	1226322.HMPREF1545_00077	167.0	0	N/A	N/A
structural_annotation	UHGV-1429071_3	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-1429071_4	phrog_16490	159.7	0	N/A	unknown function
eggNOG-mapper	UHGV-1429071_4	397290.C810_01328	96.7	1.13e-20	N/A	N/A
PHROG	UHGV-1429071_5	phrog_22984	78.9	3.8e-23	N/A	unknown function
PHROG	UHGV-1429071_6	phrog_21718	107.6	9.7e-32	N/A	unknown function
eggNOG-mapper	UHGV-1429071_6	397290.C810_05210	66.2	0.000000000021	N/A	N/A
PHROG	UHGV-1429071_7	phrog_3754	96.4	2.7e-28	N/A	unknown function
eggNOG-mapper	UHGV-1429071_7	1226322.HMPREF1545_00073	164.0	0	N/A	N/A
structural_annotation	UHGV-1429071_8	PF16509,MF_00245,NF001066,COG2739	N/A	N/A	N/A	N/A
UniRef90	UHGV-1429071_9	UniRef90_A0A358M2Y7	226.0	0	PG_binding_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-1429071_9	525254.HMPREF0072_1273	220.0	0	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	N/A
COG	UHGV-1429071_9	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-1429071_9	NF033743	N/A	N/A	N/A	N/A
PHROG	UHGV-1429071_10	phrog_13256	62.2	4.8e-18	N/A	unknown function
eggNOG-mapper	UHGV-1429071_10	1226322.HMPREF1545_00166	72.0	0.00000000000000115	N/A	N/A
Pfam	UHGV-1429071_13	PF07484	N/A	N/A	Phage Tail Collar Domain	Collar
structural_annotation	UHGV-1429071_13	PF07484	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1429071_14	PF20055,MF_03008,NF010730,COG3940	N/A	N/A	N/A	N/A
PHROG	UHGV-1429071_15	phrog_18725	89.3	3.8e-26	N/A	unknown function
eggNOG-mapper	UHGV-1429071_15	693746.OBV_18220	127.0	4.09e-35	N/A	N/A
PHROG	UHGV-1429071_18	phrog_29409	40.5	0.000000000032	N/A	unknown function
PHROG	UHGV-1429071_19	phrog_37900	322.6	0	N/A	unknown function
UniRef90	UHGV-1429071_19	UniRef90_UPI001C3EA4DF	338.0	0	N/A	N/A
eggNOG-mapper	UHGV-1429071_19	552398.HMPREF0866_03098	252.0	0	N/A	N/A
Pfam	UHGV-1429071_19	PF19789	N/A	N/A	N/A	DUF6273
COG	UHGV-1429071_19	COG3827	N/A	N/A	Cell pole-organizing protein PopZ	N/A
structural_annotation	UHGV-1429071_19	PF19789	N/A	N/A	N/A	N/A
PHROG	UHGV-1429071_20	phrog_13589	159.6	0	N/A	unknown function
eggNOG-mapper	UHGV-1429071_20	428125.CLOLEP_01434	218.0	0	N/A	N/A
PHROG	UHGV-1429071_21	phrog_31538	45.7	0.0000000000012	N/A	unknown function
structural_annotation	UHGV-1429071_22	PF10651,NF038186	N/A	N/A	N/A	N/A
PHROG	UHGV-1429071_23	phrog_13879	229.8	0	N/A	unknown function
eggNOG-mapper	UHGV-1429071_23	1226322.HMPREF1545_00061	379.0	0	N/A	N/A
structural_annotation	UHGV-1429071_23	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-1429071_24	phrog_1194	70.6	2e-20	N/A	unknown function
eggNOG-mapper	UHGV-1429071_24	411902.CLOBOL_00125	108.0	8.39e-29	N/A	N/A
structural_annotation	UHGV-1429071_24	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1429071_25	phrog_1535	115.1	0	tail length tape measure protein	tail
UniRef90	UHGV-1429071_25	UniRef90_A0A810PX76	206.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-1429071_25	1235797.C816_04182	364.0	0	SLT domain	N/A
COG	UHGV-1429071_25	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-1429071_26	phrog_706	120.4	1.3e-35	N/A	unknown function
UniRef90	UHGV-1429071_26	UniRef90_A0A2U1BEN4	211.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-1429071_26	693746.OBV_18170	199.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1429071_26	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1429071_26	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1429071_27	phrog_11299	66.1	6.2e-19	N/A	unknown function
eggNOG-mapper	UHGV-1429071_27	693746.OBV_18160	132.0	1.24e-37	N/A	N/A
structural_annotation	UHGV-1429071_27	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1429071_28	phrog_3099	88.1	1.1e-25	N/A	unknown function
eggNOG-mapper	UHGV-1429071_28	1235797.C816_04186	228.0	0	N/A	N/A
structural_annotation	UHGV-1429071_28	TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-1429071_29	phrog_3266	49.8	0.000000000000046	tail completion	connector
eggNOG-mapper	UHGV-1429071_29	1232443.BAIA02000078_gene24	164.0	0	N/A	N/A
structural_annotation	UHGV-1429071_29	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-1429071_30	phrog_556	73.4	2.6e-21	minor head protein	head and packaging
UniRef90	UHGV-1429071_30	UniRef90_UPI00195E1497	217.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1429071_30	1226322.HMPREF1545_00054	164.0	0	Minor capsid protein	N/A
Pfam	UHGV-1429071_30	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1429071_30	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-1429071_31	phrog_3366	105.9	3e-31	N/A	unknown function
eggNOG-mapper	UHGV-1429071_31	1226322.HMPREF1545_00053	176.0	0	N/A	N/A
Pfam	UHGV-1429071_31	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-1429071_31	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-1429071_32	phrog_541	104.9	4.7e-31	head-tail adaptor	connector
eggNOG-mapper	UHGV-1429071_32	642492.Clole_0822	67.0	0.0000000000029	N/A	N/A
PHROG	UHGV-1429071_33	phrog_10	169.3	0	major head protein	head and packaging
UniRef90	UHGV-1429071_33	UniRef90_A0A2U1BEF2	505.0	0	HK97 family phage major capsid protein	N/A
eggNOG-mapper	UHGV-1429071_33	1226322.HMPREF1545_00050	479.0	0	Phage capsid family	N/A
Pfam	UHGV-1429071_33	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1429071_33	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1429071_33	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1429071_33	PF05065,PF13620,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1429071_34	phrog_2303	53.3	0.0000000000000041	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-1429071_34	1226322.HMPREF1545_00049	172.0	0	N/A	N/A
AcrCatalog	UHGV-1429071_34	cluster_74817	48.5	0.00000000224	NA	N/A
PHROG	UHGV-1429071_35	phrog_581	281.8	0	minor head protein	head and packaging
UniRef90	UHGV-1429071_35	UniRef90_A0A1C5N7V1	438.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-1429071_35	1226322.HMPREF1545_00046	361.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1429071_35	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1429071_35	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1429071_35	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-1429071_36	phrog_533	359.2	0	portal protein	head and packaging
UniRef90	UHGV-1429071_36	UniRef90_UPI0006C81717	682.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1429071_36	1226322.HMPREF1545_00044	600.0	0	N/A	N/A
Pfam	UHGV-1429071_36	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1429071_36	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-1429071_37	K06909	379.2	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1429071_37	phrog_3717	160.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-1429071_37	UniRef90_A0A2U1BEH4	717.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1429071_37	1123511.KB905868_gene187	462.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-1429071_37	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1429071_37	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1429071_37	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1429071_37	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1429071_37	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-1429071_39	K07319	122.7	3.4e-36	yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	N/A
PHROG	UHGV-1429071_39	phrog_498	438.4	0	DNA methyltransferase	other
UniRef90	UHGV-1429071_39	UniRef90_UPI001782D995	441.0	0	DNA modification methylase	N/A
eggNOG-mapper	UHGV-1429071_39	1423758.BN55_01455	432.0	0	DNA methylase	N/A
PADLOC	UHGV-1429071_39	MTase_II_00015	242.0	0	Type II methyltransferase	RM
Pfam	UHGV-1429071_39	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
Pfam	UHGV-1429071_39	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-1429071_39	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-1429071_39	PF01555,PF02195,MF_02015,MF_01872,NF010253,TIGR04285,COG0863,COG1475	N/A	N/A	N/A	N/A
KOfam	UHGV-1429071_40	K07729	43.2	0.0000000000076	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-1429071_40	phrog_8	46.2	0.00000000000088	transcriptional regulator	transcription regulation
UniRef90	UHGV-1429071_40	UniRef90_A0A8D9PDC4	77.0	7.81e-17	Repressor protein	N/A
eggNOG-mapper	UHGV-1429071_40	997346.HMPREF9374_3914	53.5	0.00000011	sequence-specific DNA binding	N/A
Pfam	UHGV-1429071_40	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1429071_40	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
KOfam	UHGV-1429071_41	K01520	149.6	2.24208e-44	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-1429071_41	phrog_135	133.0	1.4e-39	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1429071_41	UniRef90_A0A3D3Y5Q7	236.0	0	dUTP diphosphatase	N/A
eggNOG-mapper	UHGV-1429071_41	887929.HMP0721_1278	140.0	4.60004e-41	dUTPase	N/A
Pfam	UHGV-1429071_41	PF00692	N/A	N/A	dUTPase	dUTPase
NCBIFam	UHGV-1429071_41	TIGR00576.1	N/A	N/A	dUTP diphosphatase	N/A
COG	UHGV-1429071_41	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-1429071_41	PF00692,MF_00116,TIGR00576,COG0756	N/A	N/A	N/A	N/A
PHROG	UHGV-1429071_43	phrog_1770	52.9	0.0000000000000071	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1429071_43	536233.CLO_1822	148.0	3.82554e-43	N/A	N/A
structural_annotation	UHGV-1429071_43	PF02075,MF_00034,NF000711,COG0817	N/A	N/A	N/A	N/A
UniRef90	UHGV-1429071_44	UniRef90_A0A1C6DFA0	201.0	0	FAD-dependent thymidylate synthase	N/A
eggNOG-mapper	UHGV-1429071_44	935948.KE386495_gene2250	99.4	7.84e-24	N/A	N/A
Pfam	UHGV-1429071_44	PF02511	N/A	N/A	Thymidylate synthase complementing protein	Thy1
structural_annotation	UHGV-1429071_44	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
PHROG	UHGV-1429071_50	phrog_2118	100.3	2.3e-29	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1429071_50	UniRef90_A0A417HX51	201.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1429071_50	1291050.JAGE01000001_gene468	119.0	3.55e-33	endonuclease activity	N/A
Pfam	UHGV-1429071_50	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1429071_50	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-1429071_50	TIGR02646,COG1403	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1429071_51	PF12092	N/A	N/A	N/A	N/A
PHROG	UHGV-1429071_53	phrog_38832	69.6	9.4e-21	N/A	unknown function
eggNOG-mapper	UHGV-1429071_53	665956.HMPREF1032_03087	95.5	2.17e-22	N/A	N/A
PHROG	UHGV-1429071_54	phrog_3136	130.8	4.9e-39	N/A	unknown function
UniRef90	UHGV-1429071_54	UniRef90_UPI001C26B029	124.0	2.46e-32	ASCH domain-containing protein	N/A
COG	UHGV-1429071_54	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-1429071_54	PF08819,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1429071	Yes	31,227	54	74	1