vOTU vOTU-105770

vOTU: vOTU-105770

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-105770
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Eubacterium_I → Eubacterium_I ramulus
Taxonomy (UHGV)	vFAM-00001 → vSUBFAM-01628 → vOTU-105770
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Eubacterium_I → Eubacterium_I ramulus
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0097896
Biosample ID	SAMEA3708689
Genome length (bp)	25,140 bps
CheckV completeness	63.99% (Medium-quality)
CDS count	45
CDS density	90.84%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Eisenbergiella → Eisenbergiella sp900066775	Total connections	1	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Eubacterium_I → Eubacterium_I ramulus	Total connections	9	Host agreement	77.78

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 63.99)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0097896_2	K14059	73.1	5.2e-21	int; integrase	N/A
PHROG	UHGV-0097896_2	phrog_1	103.6	2.7e-30	integrase	integration and excision
UniRef90	UHGV-0097896_2	UniRef90_UPI00101EF3B7	759.0	0	tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0097896_2	1232453.BAIF02000010_gene3323	415.0	0	Phage integrase family	N/A
Pfam	UHGV-0097896_2	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0097896_2	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0097896_2	PF00589,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0097896_3	phrog_7115	133.7	7.29999e-40	N/A	unknown function
UniRef90	UHGV-0097896_3	UniRef90_A0A173UN76	246.0	0	PH domain-containing protein	N/A
eggNOG-mapper	UHGV-0097896_3	476272.RUMHYD_02184	195.0	0	Bacterial PH domain	N/A
Pfam	UHGV-0097896_3	PF08000	N/A	N/A	Bacterial PH domain	bPH_1
structural_annotation	UHGV-0097896_3	PF08000,MF_00437	N/A	N/A	N/A	N/A
PHROG	UHGV-0097896_5	phrog_87	86.7	2.2e-25	metallo-protease	other
UniRef90	UHGV-0097896_5	UniRef90_A0A844E1N1	307.0	0	Peptidase_M78 domain-containing protein	N/A
eggNOG-mapper	UHGV-0097896_5	742723.HMPREF9477_00938	166.0	0	Zn peptidase	N/A
COG	UHGV-0097896_5	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0097896_5	PF06114,COG2856	N/A	N/A	N/A	N/A
UniRef90	UHGV-0097896_6	UniRef90_UPI00156F9E81	159.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0097896_6	1235798.C817_00736	103.0	5.5e-27	addiction module antidote protein HigA	N/A
COG	UHGV-0097896_6	COG3093	N/A	N/A	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	N/A
structural_annotation	UHGV-0097896_6	PF05339,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-0097896_7	UniRef90_A0A6N2UEL6	110.0	1.76e-30	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0097896_7	717606.PaecuDRAFT_3095	62.8	0.00000000000283	N/A	N/A
Pfam	UHGV-0097896_7	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0097896_7	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0097896_9	phrog_9607	69.5	6.1e-20	N/A	unknown function
eggNOG-mapper	UHGV-0097896_9	1378168.N510_03161	169.0	0	N/A	N/A
structural_annotation	UHGV-0097896_9	PF02883,MF_00791,NF012200,COG3354	N/A	N/A	N/A	N/A
UniRef90	UHGV-0097896_13	UniRef90_A0A7G5MR40	66.2	0.000000000000523	DNA-binding protein	N/A
structural_annotation	UHGV-0097896_15	PF16311,NF002796	N/A	N/A	N/A	N/A
PHROG	UHGV-0097896_17	phrog_3584	154.1	1.4013e-45	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0097896_17	1235800.C819_02258	243.0	0	N/A	N/A
structural_annotation	UHGV-0097896_17	PF21578,NF041486	N/A	N/A	N/A	N/A
KOfam	UHGV-0097896_18	K03469	76.4	5.7e-22	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	N/A
PHROG	UHGV-0097896_18	phrog_531	71.5	1.4e-20	Rnase H	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0097896_18	UniRef90_A0A844E0G2	289.0	0	RNase H type-1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0097896_18	760568.Desku_1536	85.5	5.77e-19	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids	N/A
Pfam	UHGV-0097896_18	PF00075	N/A	N/A	RNase H	RNase_H
COG	UHGV-0097896_18	COG0328	N/A	N/A	Ribonuclease HI	N/A
structural_annotation	UHGV-0097896_18	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
KOfam	UHGV-0097896_19	K03111	136.8	2.5e-40	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0097896_19	phrog_44	128.5	5.4e-38	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0097896_19	UniRef90_A0A173UNZ4	265.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0097896_19	1256908.HMPREF0373_03133	197.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0097896_19	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0097896_19	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0097896_19	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0097896_19	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0097896_19	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0097896_20	phrog_7566	105.3	1.9e-31	N/A	unknown function
eggNOG-mapper	UHGV-0097896_20	1235800.C819_00511	131.0	2.3e-37	N/A	N/A
structural_annotation	UHGV-0097896_21	PF05641	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0097896_23	1235792.C808_00065	241.0	0	N/A	N/A
PHROG	UHGV-0097896_24	phrog_8470	334.5	0	N/A	unknown function
UniRef90	UHGV-0097896_24	UniRef90_UPI0010204BDF	1281.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0097896_24	1235792.C808_00066	889.0	0	PcfJ-like protein	N/A
Pfam	UHGV-0097896_24	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0097896_24	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-0097896_25	phrog_15077	113.7	3.1e-33	N/A	unknown function
UniRef90	UHGV-0097896_25	UniRef90_UPI001D0741A0	199.0	0	N/A	N/A
eggNOG-mapper	UHGV-0097896_25	1235792.C808_00069	343.0	0	N/A	N/A
structural_annotation	UHGV-0097896_25	PF11300,NF033725	N/A	N/A	N/A	N/A
UniRef90	UHGV-0097896_26	UniRef90_R5TJQ4	134.0	1.54e-39	Carbamoyl-phosphate synthase L chain ATP-binding protein	N/A
PHROG	UHGV-0097896_27	phrog_20593	48.4	0.000000000000036	N/A	unknown function
PHROG	UHGV-0097896_29	phrog_36	56.0	9.1e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0097896_29	UniRef90_A0A3D3U8Q6	127.0	3.86e-35	Sigma70_r4 domain-containing protein	N/A
eggNOG-mapper	UHGV-0097896_29	1256908.HMPREF0373_00671	231.0	0	N/A	N/A
structural_annotation	UHGV-0097896_29	PF04545,MF_00245,TIGR01636,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-0097896_30	phrog_30856	213.8	0	N/A	unknown function
KOfam	UHGV-0097896_32	K13276	87.7	4.6e-27	bpr; bacillopeptidase F [EC:3.4.21.-]	N/A
PHROG	UHGV-0097896_32	phrog_11157	260.1	0	N/A	unknown function
UniRef90	UHGV-0097896_32	UniRef90_A0A173UNA5	630.0	0	Bacillopeptidase F	N/A
eggNOG-mapper	UHGV-0097896_32	1256908.HMPREF0373_00674	611.0	0	N/A	N/A
Pfam	UHGV-0097896_32	PF19077	N/A	N/A	Bacterial Ig-like domain	Big_13
Pfam	UHGV-0097896_32	PF09136	N/A	N/A	Glucodextranase, domain B	Glucodextran_B
COG	UHGV-0097896_32	COG3292	N/A	N/A	Periplasmic ligand-binding sensor domain	N/A
structural_annotation	UHGV-0097896_32	PF09136,PF13205,PF13754,MF_04116,NF032891,COG2372,COG5456	N/A	N/A	N/A	N/A
PHROG	UHGV-0097896_33	phrog_32322	62.3	7.4e-18	N/A	unknown function
UniRef90	UHGV-0097896_33	UniRef90_A0A173UQD8	177.0	0	Ig-like_bact domain-containing protein	N/A
eggNOG-mapper	UHGV-0097896_33	1256908.HMPREF0373_00675	166.0	0	N/A	N/A
Pfam	UHGV-0097896_33	PF13754	N/A	N/A	N/A	Big_3_4
structural_annotation	UHGV-0097896_33	PF13754	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0097896_34	PF07703,NF038114,COG5501	N/A	N/A	N/A	N/A
KOfam	UHGV-0097896_35	K07474	146.8	2.60642e-43	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0097896_35	phrog_51	153.1	1.4013e-45	terminase small subunit	head and packaging
UniRef90	UHGV-0097896_35	UniRef90_A0A3R6SKK4	220.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-0097896_35	1256908.HMPREF0373_00489	186.0	0	Terminase small subunit	N/A
Pfam	UHGV-0097896_35	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0097896_35	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0097896_35	PF03592,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-0097896_37	phrog_1233	81.8	1e-23	N/A	unknown function
eggNOG-mapper	UHGV-0097896_37	1256908.HMPREF0373_00487	240.0	0	N/A	N/A
structural_annotation	UHGV-0097896_37	PF13058	N/A	N/A	N/A	N/A
KOfam	UHGV-0097896_38	K06909	315.3	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0097896_38	phrog_3717	260.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-0097896_38	UniRef90_U2RK66	873.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-0097896_38	1256908.HMPREF0373_00486	873.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0097896_38	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0097896_38	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0097896_38	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0097896_38	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0097896_38	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0097896_39	phrog_64	299.4	0	portal protein	head and packaging
UniRef90	UHGV-0097896_39	UniRef90_U2Q3Z0	905.0	0	Putative phage portal protein, SPP1 Gp6	N/A
eggNOG-mapper	UHGV-0097896_39	1256908.HMPREF0373_00485	905.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0097896_39	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0097896_39	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-0097896_40	phrog_595	213.8	0	head maturation protease	head and packaging
UniRef90	UHGV-0097896_40	UniRef90_U2PKN7	582.0	0	Phage protein F-like protein	N/A
eggNOG-mapper	UHGV-0097896_40	1256908.HMPREF0373_00484	582.0	0	Phage Mu protein F like protein	N/A
Pfam	UHGV-0097896_40	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-0097896_40	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0097896_40	PF04233,PF15188,PF04002,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0097896_42	phrog_3675	93.1	1.6e-27	N/A	unknown function
UniRef90	UHGV-0097896_42	UniRef90_A0A0E4H649	103.0	3.5e-26	YjcQ protein	N/A
eggNOG-mapper	UHGV-0097896_42	1120978.KB894082_gene1061	107.0	1.22e-28	YjcQ protein	N/A
Pfam	UHGV-0097896_42	PF09639	N/A	N/A	YjcQ protein	YjcQ
structural_annotation	UHGV-0097896_42	PF09639,TIGR04176,COG2345	N/A	N/A	N/A	N/A
UniRef90	UHGV-0097896_43	UniRef90_A0A416HC89	95.1	9.34e-25	CopG family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0097896_43	478749.BRYFOR_07643	50.4	0.0000000858	N/A	N/A
Pfam	UHGV-0097896_43	PF10723	N/A	N/A	Replication regulatory protein RepB	RepB-RCR_reg
structural_annotation	UHGV-0097896_43	PF12651,NF041793,COG4710	N/A	N/A	N/A	N/A
KOfam	UHGV-0097896_45	K07741	80.7	4.2e-23	antB; anti-repressor protein	N/A
PHROG	UHGV-0097896_45	phrog_373	136.7	1.7e-40	anti-repressor	transcription regulation
UniRef90	UHGV-0097896_45	UniRef90_UPI00156F56E8	348.0	0	ORF6C domain-containing protein	N/A
eggNOG-mapper	UHGV-0097896_45	658655.HMPREF0988_02543	283.0	0	Phage regulatory protein	N/A
Pfam	UHGV-0097896_45	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
Pfam	UHGV-0097896_45	PF10552	N/A	N/A	ORF6C domain	ORF6C
COG	UHGV-0097896_45	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
structural_annotation	UHGV-0097896_45	PF10552,PF08346,NF008573,COG3561	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0097896	Yes	25,140	41	64	1