vOTU vOTU-106691

vOTU: vOTU-106691

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-106691
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00007 → vSUBFAM-00048 → vGENUS-00024 → vOTU-106691
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Agathobacter → Agathobacter rectalis
Host range breadth	Species
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1458896
Biosample ID	N/A
Genome length (bp)	34,482 bps
CheckV completeness	58.48% (Medium-quality)
CDS count	50
CDS density	92.10%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Agathobacter → Agathobacter rectalis	Total connections	2846	Host agreement	86.72
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae	Total connections	11	Host agreement	81.82

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 58.48)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1458896_1	phrog_64	150.6	7.00649e-45	portal protein	head and packaging
UniRef90	UHGV-1458896_1	UniRef90_A0A412RQZ0	928.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1458896_1	1232453.BAIF02000058_gene1625	335.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1458896_1	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1458896_1	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1458896_2	phrog_2662	56.5	2.7e-16	portal protein	head and packaging
UniRef90	UHGV-1458896_2	UniRef90_A0A412RR50	392.0	0	Phage_Mu_F domain-containing protein	N/A
Pfam	UHGV-1458896_2	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-1458896_2	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1458896_2	PF04233,TIGR01641	N/A	N/A	N/A	N/A
UniRef90	UHGV-1458896_3	UniRef90_UPI000E41BB01	54.3	0.0000084	N/A	N/A
PHROG	UHGV-1458896_4	phrog_909	76.4	2.7e-22	major head protein	head and packaging
UniRef90	UHGV-1458896_4	UniRef90_R7BGI8	189.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-1458896_4	1078085.HMPREF1210_01145	59.3	0.000000000674	N/A	N/A
PHROG	UHGV-1458896_5	phrog_29	151.2	7.00649e-45	major head protein	head and packaging
UniRef90	UHGV-1458896_5	UniRef90_A0A412RQU1	659.0	0	Major capsid protein	N/A
eggNOG-mapper	UHGV-1458896_5	1296659.S5MNB6_9CAUD	173.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-1458896_5	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-1458896_5	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-1458896_6	UniRef90_A0A8D9UIY7	62.8	0.0000000000457	Rho termination factor	N/A
structural_annotation	UHGV-1458896_6	PF21169	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1458896_7	397290.C810_01402	62.8	0.0000000000662	N/A	N/A
PHROG	UHGV-1458896_8	phrog_4105	75.7	9.5e-24	N/A	unknown function
eggNOG-mapper	UHGV-1458896_8	411459.RUMOBE_00911	138.0	6.15997e-41	N/A	N/A
PHROG	UHGV-1458896_9	phrog_1129	76.8	1.6e-22	holin	lysis
UniRef90	UHGV-1458896_9	UniRef90_A0A412RR82	166.0	0	Enolase	N/A
eggNOG-mapper	UHGV-1458896_9	411461.DORFOR_00721	87.8	1.14e-21	N/A	N/A
Pfam	UHGV-1458896_9	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1458896_9	PF06946	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1458896_10	1298920.KI911353_gene2656	61.6	0.000000000398	N/A	N/A
structural_annotation	UHGV-1458896_10	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1458896_11	1232453.BAIF02000058_gene1631	116.0	1.61e-30	N/A	N/A
AcrCatalog	UHGV-1458896_11	cluster_24841	148.0	0	NA	N/A
structural_annotation	UHGV-1458896_12	PF05657	N/A	N/A	N/A	N/A
UniRef90	UHGV-1458896_13	UniRef90_R7BGF5	89.0	2.47e-19	Phage tail protein	N/A
structural_annotation	UHGV-1458896_13	PF16463,TIGR02126,COG5437	N/A	N/A	N/A	N/A
KOfam	UHGV-1458896_16	K07273	160.5	0	acm; lysozyme	N/A
PHROG	UHGV-1458896_16	phrog_291	133.5	1.7e-39	endolysin	lysis
UniRef90	UHGV-1458896_16	UniRef90_A0A174GRH8	578.0	0	Autolytic lysozyme	N/A
eggNOG-mapper	UHGV-1458896_16	1235800.C819_00458	235.0	0	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-1458896_16	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-1458896_16	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-1458896_16	PF01183,PF01471,MF_01672,COG3757,COG3409	N/A	N/A	N/A	N/A
PHROG	UHGV-1458896_17	phrog_1535	64.8	2.7e-20	tail length tape measure protein	tail
UniRef90	UHGV-1458896_17	UniRef90_A0A8D9PGP0	95.5	9.35e-18	Minor tail protein	N/A
eggNOG-mapper	UHGV-1458896_17	1408437.JNJN01000010_gene1238	154.0	9.08e-39	domain protein	N/A
COG	UHGV-1458896_17	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-1458896_18	phrog_314	82.8	4.2e-24	homing endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1458896_18	UniRef90_A0A173UI60	405.0	0	Group I intron endonuclease	N/A
eggNOG-mapper	UHGV-1458896_18	1380384.JADN01000003_gene632	96.7	3.56e-21	Intron encoded nuclease repeat motif	N/A
Pfam	UHGV-1458896_18	PF01541	N/A	N/A	GIY-YIG catalytic domain	GIY-YIG
Pfam	UHGV-1458896_18	PF07453	N/A	N/A	NUMOD1 domain	NUMOD1
NCBIFam	UHGV-1458896_18	TIGR01453.1	N/A	N/A	group I intron endonuclease	N/A
structural_annotation	UHGV-1458896_18	PF07453,PF19835,PF04936,TIGR01453	N/A	N/A	N/A	N/A
PHROG	UHGV-1458896_19	phrog_1535	146.9	1.4013e-45	tail length tape measure protein	tail
UniRef90	UHGV-1458896_19	UniRef90_A0A173UHS1	365.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1458896_19	397290.C810_01419	139.0	1.82e-30	Transglycosylase SLT domain	N/A
COG	UHGV-1458896_19	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
PHROG	UHGV-1458896_20	phrog_1194	116.1	1.5e-34	N/A	unknown function
eggNOG-mapper	UHGV-1458896_20	86416.Clopa_0588	85.1	7.37e-20	N/A	N/A
Pfam	UHGV-1458896_20	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-1458896_20	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1458896_21	phrog_6616	501.5	0	tail protein	tail
UniRef90	UHGV-1458896_21	UniRef90_A0A412RR71	1000.0	0	Tail fiber domain-containing protein	N/A
eggNOG-mapper	UHGV-1458896_21	476272.RUMHYD_01992	360.0	0	N/A	N/A
structural_annotation	UHGV-1458896_21	PF05113,PF18957,NF033848,NF038186,COG4379,COG5513	N/A	N/A	N/A	N/A
PHROG	UHGV-1458896_22	phrog_1419	91.9	3.5e-27	tail protein	tail
eggNOG-mapper	UHGV-1458896_22	762211.BSTEL_0610	69.3	0.000000000121	N/A	N/A
PHROG	UHGV-1458896_23	phrog_806	40.2	0.00000000003	N/A	unknown function
eggNOG-mapper	UHGV-1458896_23	1280676.AUJO01000001_gene2313	56.2	0.00000379	N/A	N/A
Pfam	UHGV-1458896_23	PF11611	N/A	N/A	N/A	DUF4352
structural_annotation	UHGV-1458896_23	PF11611,MF_00791,NF003967,COG2967	N/A	N/A	N/A	N/A
PHROG	UHGV-1458896_24	phrog_3845	46.7	0.00000000000051	N/A	unknown function
eggNOG-mapper	UHGV-1458896_24	552396.HMPREF0863_04117	50.8	0.00000216	N/A	N/A
KOfam	UHGV-1458896_25	K22300	56.7	4.3e-16	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1458896_25	phrog_8	57.0	4e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-1458896_25	UniRef90_A0A412RR31	204.0	0	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1458896_25	1304866.K413DRAFT_0834	87.8	5.52e-21	PFAM helix-turn-helix domain protein	N/A
Pfam	UHGV-1458896_25	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1458896_25	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-1458896_25	PF12844,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-1458896_26	UniRef90_A0A412RQX5	141.0	1.24996e-42	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1458896_26	1232449.BAHV02000016_gene1846	65.1	0.00000000000617	Peptidase S24-like	N/A
Pfam	UHGV-1458896_26	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1458896_26	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-1458896_26	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1458896_28	K07741	173.7	0	antB; anti-repressor protein	N/A
PHROG	UHGV-1458896_28	phrog_63	118.6	5.7e-35	anti-repressor Ant	transcription regulation
UniRef90	UHGV-1458896_28	UniRef90_UPI001BBFD8A7	320.0	0	Phage antirepressor KilAC domain-containing protein	N/A
eggNOG-mapper	UHGV-1458896_28	658655.HMPREF0988_02592	244.0	0	AntA/AntB antirepressor	N/A
Pfam	UHGV-1458896_28	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
Pfam	UHGV-1458896_28	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-1458896_28	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-1458896_28	PF03374,PF08346,TIGR02681,COG3645,COG3561	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1458896_30	742765.HMPREF9457_03017	104.0	9.23e-25	peptidase	N/A
COG	UHGV-1458896_30	COG4942	N/A	N/A	Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB	N/A
KOfam	UHGV-1458896_32	K19171	76.8	1.9e-22	dndD; DNA sulfur modification protein DndD	N/A
PHROG	UHGV-1458896_32	phrog_77	147.6	7.56701e-44	SbcC-like subunit of palindrome specific endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1458896_32	UniRef90_A0A412RQV0	900.0	0	AAA_23 domain-containing protein	N/A
eggNOG-mapper	UHGV-1458896_32	397290.C810_01461	385.0	0	nuclear chromosome segregation	N/A
COG	UHGV-1458896_32	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-1458896_32	PF02463,MF_00449,NF041034,COG0419	N/A	N/A	N/A	N/A
PHROG	UHGV-1458896_33	phrog_2164	88.7	1.4e-26	N/A	unknown function
eggNOG-mapper	UHGV-1458896_33	1174684.EBMC1_14695	53.1	0.00000718	N/A	N/A
KOfam	UHGV-1458896_36	K07455	157.2	0	recT; recombination protein RecT	N/A
PHROG	UHGV-1458896_36	phrog_148	173.0	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1458896_36	UniRef90_A0A317UEK3	279.0	0	Recombinase RecT	N/A
eggNOG-mapper	UHGV-1458896_36	1298920.KI911353_gene2727	247.0	0	RecT family	N/A
Pfam	UHGV-1458896_36	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-1458896_36	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-1458896_36	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-1458896_36	PF03837,NF007351,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-1458896_37	phrog_25456	87.7	9.1e-26	N/A	unknown function
PHROG	UHGV-1458896_39	phrog_392	112.0	2.9e-33	metal-dependent hydrolase	other
UniRef90	UHGV-1458896_39	UniRef90_A0A412RQX2	343.0	0	MBL fold metallo-hydrolase	N/A
eggNOG-mapper	UHGV-1458896_39	1232453.BAIF02000057_gene1138	105.0	3.08e-26	May be involved in the transport of PQQ or its precursor to the periplasm	N/A
COG	UHGV-1458896_39	COG1235	N/A	N/A	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	N/A
structural_annotation	UHGV-1458896_39	PF02112,MF_00457,NF041851,COG2220	N/A	N/A	N/A	N/A
KOfam	UHGV-1458896_41	K03111	111.7	9.6e-33	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1458896_41	phrog_44	121.1	8.6e-36	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1458896_41	UniRef90_UPI000E3FC2A8	155.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1458896_41	397290.C810_01495	155.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-1458896_41	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1458896_41	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1458896_41	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1458896_41	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1458896_41	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1458896_42	PF00041	N/A	N/A	N/A	N/A
PHROG	UHGV-1458896_43	phrog_3377	114.3	2.70002e-41	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1458896_43	UniRef90_A0A7U3T981	101.0	1.1e-22	Helix-turn-helix DNA binding domain protein	N/A
eggNOG-mapper	UHGV-1458896_43	1460635.JCM19038_3433	112.0	7.13e-28	N/A	N/A
PHROG	UHGV-1458896_44	phrog_19106	299.2	0	N/A	unknown function
UniRef90	UHGV-1458896_44	UniRef90_R6RVQ6	267.0	0	GIY-YIG domain-containing protein	N/A
eggNOG-mapper	UHGV-1458896_44	658655.HMPREF0988_00875	214.0	0	N/A	N/A
structural_annotation	UHGV-1458896_44	TIGR01453	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1458896_45	PF17388	N/A	N/A	N/A	N/A
PHROG	UHGV-1458896_46	phrog_8489	166.4	0	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1458896_46	UniRef90_UPI001BB8B78A	206.0	0	Phage replication initiation protein	N/A
eggNOG-mapper	UHGV-1458896_46	1196322.A370_02071	129.0	1.13e-33	DnaD domain protein	N/A
COG	UHGV-1458896_46	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
PHROG	UHGV-1458896_47	phrog_9804	166.3	0	N/A	unknown function
UniRef90	UHGV-1458896_47	UniRef90_A0A412RQW3	296.0	0	Inhibitor_G39P domain-containing protein	N/A
eggNOG-mapper	UHGV-1458896_47	626523.GCWU000342_01038	132.0	1.06e-35	Loader and inhibitor of phage G40P	N/A
Pfam	UHGV-1458896_47	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-1458896_47	PF11417	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1458896	Yes	34,482	39	58	1