vOTU vOTU-107117

vOTU: vOTU-107117

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-107117
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00041 → vSUBFAM-01635 → vOTU-107117
Host lineage
Host range breadth
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0007488
Biosample ID	SAMEA4766408
Genome length (bp)	43,423 bps
CheckV completeness	69.03% (Medium-quality)
CDS count	57
CDS density	93.29%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method
CRISPR-predicted host lineage	Total connections	Host agreement
PHIST-predicted host lineage	Total connections	Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 69.03)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0007488_11	K06909	384.1	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0007488_11	phrog_3717	240.0	0	terminase large subunit	head and packaging
UniRef90	UHGV-0007488_11	UniRef90_A0A316M6C2	542.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0007488_11	268407.PWYN_15645	484.0	0	Terminase RNAseH like domain	N/A
Pfam	UHGV-0007488_11	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0007488_11	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0007488_11	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0007488_11	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0007488_11	PF04466,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0007488_12	phrog_64	311.0	0	portal protein	head and packaging
UniRef90	UHGV-0007488_12	UniRef90_A0A101H944	418.0	0	Phage portal protein, SPP1 family	N/A
eggNOG-mapper	UHGV-0007488_12	268407.PWYN_15650	355.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0007488_12	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0007488_12	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0007488_13	phrog_194	132.1	4.1e-39	head scaffolding protein	head and packaging
UniRef90	UHGV-0007488_13	UniRef90_S5MAD0	119.0	6.2e-30	Minor structural protein	N/A
eggNOG-mapper	UHGV-0007488_13	1296662.S5MAD0_9CAUD	119.0	1.04e-30	Phage minor structural protein GP20	N/A
Pfam	UHGV-0007488_13	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0007488_13	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0007488_14	phrog_909	68.0	6.3e-20	major head protein	head and packaging
eggNOG-mapper	UHGV-0007488_14	1536772.R70723_06665	55.5	0.000000211	N/A	N/A
structural_annotation	UHGV-0007488_14	PF09087	N/A	N/A	N/A	N/A
PHROG	UHGV-0007488_15	phrog_29	197.5	0	major head protein	head and packaging
UniRef90	UHGV-0007488_15	UniRef90_UPI00096FCEC9	349.0	0	major capsid protein	N/A
eggNOG-mapper	UHGV-0007488_15	1296659.S5MNB6_9CAUD	317.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-0007488_15	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-0007488_15	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0007488_17	phrog_132	45.3	0.00000000000078	head-tail adaptor	connector
eggNOG-mapper	UHGV-0007488_17	97138.C820_00227	54.7	0.0000001	Phage gp6-like head-tail connector protein	N/A
PHROG	UHGV-0007488_18	phrog_615	54.5	0.0000000000000017	head-tail adaptor	connector
eggNOG-mapper	UHGV-0007488_18	1029718.SFBM_0124	51.6	0.0000014	N/A	N/A
structural_annotation	UHGV-0007488_18	PF12206,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0007488_20	phrog_525	56.8	4.3e-16	N/A	unknown function
eggNOG-mapper	UHGV-0007488_20	1408823.AXUS01000024_gene2721	60.5	0.00000000156	N/A	N/A
Pfam	UHGV-0007488_20	PF20765	N/A	N/A	N/A	DUF6838
structural_annotation	UHGV-0007488_20	PF20765,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-0007488_21	phrog_279	307.6	0	tail sheath	tail
UniRef90	UHGV-0007488_21	UniRef90_A0A1V5XJD6	343.0	0	Phage tail sheath protein	N/A
eggNOG-mapper	UHGV-0007488_21	1089548.KI783301_gene2608	309.0	0	Phage tail sheath C-terminal domain	N/A
Pfam	UHGV-0007488_21	PF17481	N/A	N/A	Phage tail sheath protein beta-sandwich domain	Phage_sheath_1N
Pfam	UHGV-0007488_21	PF04984	N/A	N/A	Phage tail sheath protein subtilisin-like domain	Phage_sheath_1
Pfam	UHGV-0007488_21	PF17482	N/A	N/A	Phage tail sheath C-terminal domain	Phage_sheath_1C
structural_annotation	UHGV-0007488_21	PF17482,PF04984,PF17481,COG4386	N/A	N/A	N/A	N/A
PHROG	UHGV-0007488_22	phrog_365	151.9	2.8026e-45	tail protein	tail
UniRef90	UHGV-0007488_22	UniRef90_UPI00189E83A7	167.0	0	phage tail tube protein	N/A
eggNOG-mapper	UHGV-0007488_22	1536772.R70723_06710	156.0	0	Phage portal protein	N/A
Pfam	UHGV-0007488_22	PF09393	N/A	N/A	Phage tail tube protein	DUF2001
structural_annotation	UHGV-0007488_22	PF09393,TIGR02241,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0007488_23	phrog_389	114.9	5.3e-34	tail protein XkdN-like	tail
UniRef90	UHGV-0007488_23	UniRef90_A0A8A5ZEY9	137.0	5.58e-39	XkdN-like protein	N/A
eggNOG-mapper	UHGV-0007488_23	1122919.KB905569_gene2950	126.0	1.71e-35	Phage portal protein	N/A
Pfam	UHGV-0007488_23	PF08890	N/A	N/A	Phage XkdN-like tail assembly chaperone protein, TAC	Phage_TAC_5
structural_annotation	UHGV-0007488_23	PF08890,COG4518	N/A	N/A	N/A	N/A
PHROG	UHGV-0007488_24	phrog_8010	167.8	0	tail length tape measure protein	tail
UniRef90	UHGV-0007488_24	UniRef90_UPI001AE36C0A	137.0	3.41e-30	tape measure protein	N/A
eggNOG-mapper	UHGV-0007488_24	233412.HD_0140	117.0	2.46e-24	tail length tape measure protein	N/A
Pfam	UHGV-0007488_24	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0007488_24	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0007488_24	COG5281	N/A	N/A	Phage-related minor tail protein	N/A
PHROG	UHGV-0007488_25	phrog_400	121.4	7.1e-36	tail protein	tail
UniRef90	UHGV-0007488_25	UniRef90_A0A0U2MA30	95.9	2.07e-18	Phage-like element PBSX protein XkdQ	N/A
eggNOG-mapper	UHGV-0007488_25	1536772.R70723_06740	85.9	9.9e-16	Phage-like element PBSX protein XkdQ	N/A
COG	UHGV-0007488_25	COG4193	N/A	N/A	Beta- N-acetylglucosaminidase	N/A
PHROG	UHGV-0007488_26	phrog_579	66.8	1e-19	N/A	unknown function
UniRef90	UHGV-0007488_26	UniRef90_A0A3A9F648	70.1	0.00000000000378	N/A	N/A
eggNOG-mapper	UHGV-0007488_26	1235793.C809_01946	54.7	0.000000369	N/A	N/A
Pfam	UHGV-0007488_26	PF10844	N/A	N/A	N/A	DUF2577
PHROG	UHGV-0007488_27	phrog_380	51.4	9.4e-17	endolysin	lysis
PHROG	UHGV-0007488_28	phrog_120	53.4	0.000000000000004	baseplate protein	tail
UniRef90	UHGV-0007488_28	UniRef90_UPI001158376D	83.6	3.31e-18	N/A	N/A
eggNOG-mapper	UHGV-0007488_28	1120998.AUFC01000013_gene2975	82.8	1.08e-18	N/A	N/A
Pfam	UHGV-0007488_28	PF10934	N/A	N/A	N/A	DUF2634
COG	UHGV-0007488_28	COG3628	N/A	N/A	Phage baseplate assembly protein W	N/A
structural_annotation	UHGV-0007488_28	PF10934,MF_02010,TIGR03357,COG3628	N/A	N/A	N/A	N/A
PHROG	UHGV-0007488_29	phrog_6	163.6	0	baseplate protein	tail
UniRef90	UHGV-0007488_29	UniRef90_A0A7X8C3T0	330.0	0	Baseplate J/gp47 family protein	N/A
eggNOG-mapper	UHGV-0007488_29	12402.Q708L2_9CAUD	266.0	0	Baseplate J-like protein	N/A
Pfam	UHGV-0007488_29	PF04865	N/A	N/A	Baseplate J-like protein	Baseplate_J
structural_annotation	UHGV-0007488_29	PF04865,PF21379,MF_04102,TIGR02243,COG3299	N/A	N/A	N/A	N/A
PHROG	UHGV-0007488_30	phrog_521	85.8	4.3e-25	tail protein	tail
UniRef90	UHGV-0007488_30	UniRef90_UPI0018A0144E	162.0	2.66247e-44	N/A	N/A
eggNOG-mapper	UHGV-0007488_30	756499.Desde_1103	112.0	2.41e-27	N/A	N/A
Pfam	UHGV-0007488_30	PF10076	N/A	N/A	Bacteriophage Mu-like, Gp48	Phage_Mu_Gp48
COG	UHGV-0007488_30	COG4385	N/A	N/A	Bacteriophage P2-related tail formation protein	N/A
structural_annotation	UHGV-0007488_30	PF10076,PF12571,TIGR02242,COG3778	N/A	N/A	N/A	N/A
PHROG	UHGV-0007488_32	phrog_1348	43.6	0.0000000000052	tail fiber protein	tail
Pfam	UHGV-0007488_32	PF14301	N/A	N/A	N/A	DUF4376
PHROG	UHGV-0007488_39	phrog_894	42.5	0.0000000000087	endolysin	lysis
UniRef90	UHGV-0007488_39	UniRef90_A0A7C3SNM2	87.8	2.04e-19	Peptidase_M15_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0007488_39	1349822.NSB1T_07980	90.5	3.37e-21	N/A	N/A
structural_annotation	UHGV-0007488_39	PF05951,COG3108	N/A	N/A	N/A	N/A
PHROG	UHGV-0007488_43	phrog_9288	43.5	0.0000000000032	N/A	unknown function
eggNOG-mapper	UHGV-0007488_43	476272.RUMHYD_01770	69.3	0.0000000000325	N/A	N/A
KOfam	UHGV-0007488_47	K14440	280.1	0	SMARCAL1, HARP; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]	N/A
PHROG	UHGV-0007488_47	phrog_62	324.7	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0007488_47	UniRef90_D9ZNF7	411.0	0	Putative helicase	N/A
eggNOG-mapper	UHGV-0007488_47	871584.D9ZNF7_9CAUD	411.0	0	helicase activity	N/A
PADLOC	UHGV-0007488_47	ZorD1_00003	188.1	0	SWI2/SNF2 helicase, Mrr-like nuclease	Zorya
Pfam	UHGV-0007488_47	PF00176	N/A	N/A	SNF2-related domain	SNF2-rel_dom
Pfam	UHGV-0007488_47	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
structural_annotation	UHGV-0007488_47	PF00176,PF00271,PF07443,MF_01821,NF041790,TIGR01158,COG0553	N/A	N/A	N/A	N/A
PHROG	UHGV-0007488_49	phrog_34398	43.5	0.0000000000047	N/A	unknown function
PHROG	UHGV-0007488_51	phrog_19658	42.0	0.0000000000044	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0007488_51	UniRef90_A0A843GWX4	115.0	2.01e-27	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0007488_51	553220.CAMGR0001_2120	79.7	0.0000000000000213	N/A	N/A
structural_annotation	UHGV-0007488_51	PF04703,NF040939,COG1846	N/A	N/A	N/A	N/A
KOfam	UHGV-0007488_52	K02315	86.0	5.2e-25	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-0007488_52	phrog_50	100.1	3e-29	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0007488_52	UniRef90_A0A843GUW7	125.0	7.64e-32	ATP-binding protein	N/A
eggNOG-mapper	UHGV-0007488_52	871584.D9ZNG3_9CAUD	124.0	6.46e-32	IstB-like ATP binding protein	N/A
Pfam	UHGV-0007488_52	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
structural_annotation	UHGV-0007488_52	PF01695,MF_01919,NF005992,COG1484	N/A	N/A	N/A	N/A
KOfam	UHGV-0007488_53	K02314	116.2	3.3e-34	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-0007488_53	phrog_19	168.0	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0007488_53	UniRef90_A0A7X7ELY1	236.0	0	SF4 helicase domain-containing protein	N/A
eggNOG-mapper	UHGV-0007488_53	59241.E7DND1_BPDP1	224.0	0	DNA helicase activity	N/A
Pfam	UHGV-0007488_53	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
structural_annotation	UHGV-0007488_53	PF03796,MF_04155,TIGR00665,COG0305	N/A	N/A	N/A	N/A
KOfam	UHGV-0007488_54	K02316	93.4	2e-27	dnaG; DNA primase [EC:2.7.7.101]	N/A
PHROG	UHGV-0007488_54	phrog_47	150.9	9.80909e-45	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0007488_54	UniRef90_A0A7X7EMQ9	311.0	0	Toprim domain-containing protein	N/A
eggNOG-mapper	UHGV-0007488_54	871584.D9ZNG6_9CAUD	286.0	0	Toprim-like	N/A
Pfam	UHGV-0007488_54	PF13155	N/A	N/A	Toprim-like	Toprim_2
structural_annotation	UHGV-0007488_54	PF13155,PF01807,PF08275,MF_00974,TIGR01391,COG0358	N/A	N/A	N/A	N/A
PHROG	UHGV-0007488_55	phrog_14578	140.9	8.2004e-42	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0007488_55	59241.E7DND4_BPDP1	94.7	8.67e-21	N/A	N/A
structural_annotation	UHGV-0007488_55	PF08804,MF_04152	N/A	N/A	N/A	N/A
KOfam	UHGV-0007488_56	K02335	354.9	0	polA; DNA polymerase I [EC:2.7.7.7]	N/A
PHROG	UHGV-0007488_56	phrog_17	391.9	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0007488_56	UniRef90_D9ZNH3	525.0	0	Putative DNA polymerase	N/A
eggNOG-mapper	UHGV-0007488_56	871584.D9ZNH3_9CAUD	525.0	0	DNA polymerase family A	N/A
PADLOC	UHGV-0007488_56	drt-cluster58	98.7	4.6e-34	DRT	DRT
Pfam	UHGV-0007488_56	PF01612	N/A	N/A	3'-5' exonuclease	DNA_pol_A_exo1
Pfam	UHGV-0007488_56	PF00476	N/A	N/A	DNA polymerase family A	DNA_pol_A
structural_annotation	UHGV-0007488_56	PF00476,PF01612,MF_04101,NF004397,COG0749	N/A	N/A	N/A	N/A
KOfam	UHGV-0007488_57	K09457	231.8	0	queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]	N/A
PHROG	UHGV-0007488_57	phrog_887	180.9	0	queuine tRNA-ribosyltransferase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0007488_57	UniRef90_E7DN71	291.0	0	Queuosine tRNA-ribosyltransferase	N/A
eggNOG-mapper	UHGV-0007488_57	59241.E7DN71_BPDP1	291.0	0	tRNA modification	N/A
Pfam	UHGV-0007488_57	PF14489	N/A	N/A	QueF-like protein	QueF
NCBIFam	UHGV-0007488_57	TIGR03139.1	N/A	N/A	preQ(1) synthase	N/A
HAMAP	UHGV-0007488_57	MF_00818	N/A	N/A	NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0007488	Yes	43,423	31	69	1
UHGV-0000826	No	43,389	31	69	1
UHGV-0034437	No	42,974	31	68	1