vOTU vOTU-107333

vOTU: vOTU-107333

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-107333
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Copromonas → Copromonas sp900066535
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00095 → vGENUS-02107 → vOTU-107333
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Copromonas → Copromonas sp900066535
Host range breadth	Species
Lifestyle	temperate (Evidence: geNomad)

Representative genome
Genome ID	UHGV-0126097
Biosample ID	N/A
Genome length (bp)	34,367 bps
CheckV completeness	89.05% (Medium-quality)
CDS count	47
CDS density	90.36%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Copromonas → Copromonas sp900066535	Total connections	82	Host agreement	76.83
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Copromonas → Copromonas sp900066535	Total connections	41	Host agreement	78.05

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 89.05)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
COG	UHGV-0126097_1	COG3266	N/A	N/A	Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain	N/A
eggNOG-mapper	UHGV-0126097_3	411902.CLOBOL_00122	108.0	4.38e-28	N/A	N/A
PHROG	UHGV-0126097_4	phrog_18725	107.6	1.2e-31	N/A	unknown function
eggNOG-mapper	UHGV-0126097_4	742740.HMPREF9474_03517	197.0	0	N/A	N/A
PHROG	UHGV-0126097_5	phrog_13879	437.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0126097_5	742740.HMPREF9474_03516	997.0	0	N/A	N/A
structural_annotation	UHGV-0126097_5	PF03256,PF16466,PF13550,MF_00813,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0126097_6	phrog_1194	69.2	5.5e-20	N/A	unknown function
eggNOG-mapper	UHGV-0126097_6	1304866.K413DRAFT_0775	228.0	0	N/A	N/A
structural_annotation	UHGV-0126097_6	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0126097_7	phrog_1535	438.3	0	tail length tape measure protein	tail
UniRef90	UHGV-0126097_7	UniRef90_A0A174SV65	907.0	0	Phage-like protein	N/A
eggNOG-mapper	UHGV-0126097_7	742740.HMPREF9474_03514	721.0	0	tape measure	N/A
COG	UHGV-0126097_7	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0126097_7	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0126097_8	phrog_8300	81.6	8.8e-24	N/A	unknown function
eggNOG-mapper	UHGV-0126097_8	742740.HMPREF9474_03512	108.0	2.02e-29	N/A	N/A
structural_annotation	UHGV-0126097_8	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0126097_9	phrog_820	129.9	1.2e-38	major tail protein	tail
eggNOG-mapper	UHGV-0126097_9	742740.HMPREF9474_03511	248.0	0	domain, Protein	N/A
COG	UHGV-0126097_9	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0126097_9	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0126097_10	phrog_2595	82.4	5.1e-24	head-tail connector protein	connector
UniRef90	UHGV-0126097_10	UniRef90_UPI001D068DAC	186.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0126097_10	483218.BACPEC_01150	181.0	0	N/A	N/A
Pfam	UHGV-0126097_10	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-0126097_10	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-0126097_11	phrog_556	62.4	7.3e-18	minor head protein	head and packaging
eggNOG-mapper	UHGV-0126097_11	742740.HMPREF9474_03509	185.0	0	N/A	N/A
PHROG	UHGV-0126097_12	phrog_8710	135.7	1.4e-40	N/A	unknown function
eggNOG-mapper	UHGV-0126097_12	742740.HMPREF9474_03508	191.0	0	N/A	N/A
structural_annotation	UHGV-0126097_12	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0126097_13	phrog_541	89.8	2.7e-26	head-tail adaptor	connector
eggNOG-mapper	UHGV-0126097_13	1304866.K413DRAFT_0783	202.0	0	N/A	N/A
PHROG	UHGV-0126097_14	phrog_1378	73.0	3.1e-21	N/A	unknown function
eggNOG-mapper	UHGV-0126097_14	1280692.AUJL01000027_gene2159	75.1	1.02e-16	N/A	N/A
PHROG	UHGV-0126097_15	phrog_422	341.7	0	major head protein	head and packaging
UniRef90	UHGV-0126097_15	UniRef90_A0A3R6PT58	519.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-0126097_15	33035.JPJF01000093_gene2252	498.0	0	N/A	N/A
structural_annotation	UHGV-0126097_15	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0126097_16	phrog_2303	154.7	0	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-0126097_16	483218.BACPEC_01156	212.0	0	N/A	N/A
PHROG	UHGV-0126097_17	phrog_15041	78.9	4.2e-23	N/A	unknown function
eggNOG-mapper	UHGV-0126097_17	478749.BRYFOR_07608	55.1	0.00000000445	N/A	N/A
structural_annotation	UHGV-0126097_17	PF10827	N/A	N/A	N/A	N/A
PHROG	UHGV-0126097_18	phrog_581	227.1	0	minor head protein	head and packaging
UniRef90	UHGV-0126097_18	UniRef90_A0A1C5VPR8	734.0	0	ATPase involved in DNA repair	N/A
eggNOG-mapper	UHGV-0126097_18	742740.HMPREF9474_03503	469.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0126097_18	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0126097_18	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0126097_18	PF06152,PF21814	N/A	N/A	N/A	N/A
PHROG	UHGV-0126097_19	phrog_25639	122.2	1.2e-36	N/A	unknown function
eggNOG-mapper	UHGV-0126097_19	742740.HMPREF9474_03502	100.0	8.07e-27	N/A	N/A
PHROG	UHGV-0126097_20	phrog_533	287.9	0	portal protein	head and packaging
UniRef90	UHGV-0126097_20	UniRef90_A0A174WUZ7	783.0	0	Phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0126097_20	742740.HMPREF9474_03501	753.0	0	N/A	N/A
structural_annotation	UHGV-0126097_20	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0126097_21	K06909	88.5	9.3e-26	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0126097_21	phrog_2	67.8	2.4e-19	terminase large subunit	head and packaging
UniRef90	UHGV-0126097_21	UniRef90_A0A3R6QNE9	860.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0126097_21	1304866.K413DRAFT_0811	776.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-0126097_21	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0126097_21	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0126097_22	K07474	142.0	7.19987e-42	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0126097_22	phrog_51	154.8	0	terminase small subunit	head and packaging
UniRef90	UHGV-0126097_22	UniRef90_UPI001158F972	317.0	0	terminase small subunit	N/A
eggNOG-mapper	UHGV-0126097_22	1304866.K413DRAFT_0812	224.0	0	Terminase small subunit	N/A
Pfam	UHGV-0126097_22	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0126097_22	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0126097_22	PF03592,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-0126097_23	phrog_36	45.1	0.000000000002	transcriptional regulator	transcription regulation
UniRef90	UHGV-0126097_23	UniRef90_A0A3R6PH33	266.0	0	RNA polymerase subunit sigma-70	N/A
eggNOG-mapper	UHGV-0126097_23	742740.HMPREF9474_03497	159.0	0	N/A	N/A
structural_annotation	UHGV-0126097_23	PF02996	N/A	N/A	N/A	N/A
PHROG	UHGV-0126097_24	phrog_23707	74.4	1.8e-21	N/A	unknown function
UniRef90	UHGV-0126097_24	UniRef90_A0A416YRR0	124.0	3.75e-36	Alanine racemase	N/A
eggNOG-mapper	UHGV-0126097_24	411483.FAEPRAA2165_01889	62.0	0.0000000000515	N/A	N/A
PHROG	UHGV-0126097_26	phrog_2715	146.2	1.20512e-43	N/A	unknown function
UniRef90	UHGV-0126097_26	UniRef90_A0A1B8RSY6	100.0	6.74e-24	N/A	N/A
eggNOG-mapper	UHGV-0126097_26	171693.BN988_01626	113.0	1.3e-29	N/A	N/A
structural_annotation	UHGV-0126097_26	PF18406	N/A	N/A	N/A	N/A
UniRef90	UHGV-0126097_27	UniRef90_A0A415VS52	390.0	0	N/A	N/A
eggNOG-mapper	UHGV-0126097_27	1256908.HMPREF0373_00667	117.0	2.3e-31	N/A	N/A
Pfam	UHGV-0126097_27	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0126097_27	PF04448	N/A	N/A	N/A	N/A
PHROG	UHGV-0126097_29	phrog_7566	78.1	7.3e-23	N/A	unknown function
eggNOG-mapper	UHGV-0126097_29	1235800.C819_00511	185.0	0	N/A	N/A
PHROG	UHGV-0126097_32	phrog_15077	86.8	4.6e-26	N/A	unknown function
UniRef90	UHGV-0126097_32	UniRef90_A0A174WLY0	193.0	0	N/A	N/A
eggNOG-mapper	UHGV-0126097_32	1280698.AUJS01000007_gene1019	194.0	0	N/A	N/A
structural_annotation	UHGV-0126097_32	PF11300,NF038070	N/A	N/A	N/A	N/A
PHROG	UHGV-0126097_33	phrog_8470	244.0	0	N/A	unknown function
UniRef90	UHGV-0126097_33	UniRef90_UPI001158FAD9	809.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0126097_33	411902.CLOBOL_05697	530.0	0	PcfJ-like protein	N/A
Pfam	UHGV-0126097_33	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0126097_33	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-0126097_34	phrog_4433	51.9	1.1e-17	N/A	unknown function
eggNOG-mapper	UHGV-0126097_34	411902.CLOBOL_05698	139.0	3.64e-39	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0126097_34	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-0126097_34	PF12120,NF000066	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0126097_35	411902.CLOBOL_05699	187.0	0	N/A	N/A
KOfam	UHGV-0126097_36	K03733	176.1	0	xerC; integrase/recombinase XerC	N/A
PHROG	UHGV-0126097_36	phrog_1	136.3	3.09999e-40	integrase	integration and excision
UniRef90	UHGV-0126097_36	UniRef90_UPI00115A577A	667.0	0	tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0126097_36	742740.HMPREF9474_04312	288.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0126097_36	PF13495	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_4
Pfam	UHGV-0126097_36	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0126097_36	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0126097_36	PF00589,PF02899,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
PHROG	UHGV-0126097_37	phrog_3584	169.5	0	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0126097_37	610130.Closa_0713	279.0	0	N/A	N/A
PHROG	UHGV-0126097_42	phrog_585	106.2	2.6e-31	N/A	unknown function
UniRef90	UHGV-0126097_42	UniRef90_A0A851IGZ3	136.0	4.91e-39	N/A	N/A
eggNOG-mapper	UHGV-0126097_42	526218.Sterm_0828	96.3	6.5e-24	N/A	N/A
Pfam	UHGV-0126097_42	PF10711	N/A	N/A	N/A	DUF2513
structural_annotation	UHGV-0126097_42	PF10711,TIGR03433,COG1695	N/A	N/A	N/A	N/A
PHROG	UHGV-0126097_44	phrog_750	75.1	6.8e-22	N/A	unknown function
eggNOG-mapper	UHGV-0126097_44	742723.HMPREF9477_00931	105.0	3.32e-28	N/A	N/A
structural_annotation	UHGV-0126097_44	PF13835,NF040858	N/A	N/A	N/A	N/A
KOfam	UHGV-0126097_46	K18830	66.7	4.8e-19	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0126097_46	phrog_2967	57.3	2.8e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0126097_46	UniRef90_A0A349QMZ5	246.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0126097_46	1235793.C809_02627	202.0	0	Helix-turn-helix XRE-family like proteins	N/A
PADLOC	UHGV-0126097_46	retron_type_VI_hth_cluster2_1	46.8	0.00000000000072	N/A	Retron
Pfam	UHGV-0126097_46	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0126097_46	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0126097_46	PF12844,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0126097_47	K06400	285.2	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0126097_47	phrog_95	272.2	0	integrase	integration and excision
UniRef90	UHGV-0126097_47	UniRef90_R5FU90	888.0	0	Resolvase domain protein	N/A
eggNOG-mapper	UHGV-0126097_47	1298920.KI911353_gene3266	528.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0126097_47	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0126097_47	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0126097_47	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0126097_47	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0126097_47	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0126097	Yes	34,367	48	89	1