vOTU vOTU-107485

vOTU: vOTU-107485

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-107485
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia
Taxonomy (UHGV)	vFAM-00007 → vSUBFAM-00026 → vGENUS-00148 → vOTU-107485
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Lachnospira
Host range breadth	Genus
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1520227
Biosample ID	N/A
Genome length (bp)	44,807 bps
CheckV completeness	78.84% (Medium-quality)
CDS count	73
CDS density	89.05%
tRNA count	2
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Lachnospira	Total connections	4013	Host agreement	92.75
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia	Total connections	18	Host agreement	72.22

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 78.84)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1520227_2	phrog_9804	156.9	0	N/A	unknown function
UniRef90	UHGV-1520227_2	UniRef90_A0A292SPH8	302.0	0	Inhibitor_G39P domain-containing protein	N/A
eggNOG-mapper	UHGV-1520227_2	626523.GCWU000342_01038	133.0	7.55e-36	Loader and inhibitor of phage G40P	N/A
Pfam	UHGV-1520227_2	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-1520227_2	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-1520227_3	phrog_2514	113.0	1.9e-33	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1520227_3	UniRef90_A0A2P1JTY8	118.0	4.2e-28	DNA replication protein	N/A
eggNOG-mapper	UHGV-1520227_3	1111134.HMPREF1253_0393	120.0	5.74e-30	Transcriptional regulator	N/A
COG	UHGV-1520227_3	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1520227_3	PF09681,MF_01177,TIGR01714,COG1846	N/A	N/A	N/A	N/A
UniRef90	UHGV-1520227_4	UniRef90_UPI001C399578	363.0	0	Site-specific DNA-methyltransferase	N/A
eggNOG-mapper	UHGV-1520227_4	411468.CLOSCI_00299	346.0	0	DNA methylase	N/A
COG	UHGV-1520227_4	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-1520227_4	PF01555,MF_01872,NF010253,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-1520227_6	phrog_19106	278.9	0	N/A	unknown function
UniRef90	UHGV-1520227_6	UniRef90_A0A412RQV5	367.0	0	GIY-YIG nuclease family protein	N/A
eggNOG-mapper	UHGV-1520227_6	658655.HMPREF0988_00875	227.0	0	N/A	N/A
structural_annotation	UHGV-1520227_6	TIGR01453	N/A	N/A	N/A	N/A
PHROG	UHGV-1520227_7	phrog_10714	59.3	6.3e-17	N/A	unknown function
eggNOG-mapper	UHGV-1520227_7	537007.BLAHAN_05460	49.7	0.00000111	N/A	N/A
KOfam	UHGV-1520227_8	K03111	115.4	7.9e-34	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1520227_8	phrog_44	126.2	2.5e-37	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1520227_8	UniRef90_A0A412RR48	268.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1520227_8	397290.C810_01495	190.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-1520227_8	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1520227_8	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1520227_8	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1520227_8	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1520227_8	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1520227_9	phrog_20891	64.5	1.6e-18	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1520227_9	UniRef90_UPI0013794BCD	191.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1520227_9	864702.OsccyDRAFT_0645	62.8	0.000000000718	HNH endonuclease	N/A
Pfam	UHGV-1520227_9	PF13392	N/A	N/A	HNH endonuclease	HNH_3
structural_annotation	UHGV-1520227_9	PF13392	N/A	N/A	N/A	N/A
KOfam	UHGV-1520227_10	K06167	46.6	0.00000000000041	phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]	N/A
PHROG	UHGV-1520227_10	phrog_392	184.4	0	metal-dependent hydrolase	other
UniRef90	UHGV-1520227_10	UniRef90_A0A412RQX2	365.0	0	MBL fold metallo-hydrolase	N/A
eggNOG-mapper	UHGV-1520227_10	748727.CLJU_c31620	163.0	0	Metallo-beta-lactamase superfamily	N/A
Pfam	UHGV-1520227_10	PF00753	N/A	N/A	Metallo-beta-lactamase superfamily	Lactamase_B
dbAPIS	UHGV-1520227_10	APIS058	N/A	N/A	N/A	N/A
COG	UHGV-1520227_10	COG1235	N/A	N/A	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	N/A
structural_annotation	UHGV-1520227_10	PF02112,MF_01818,NF041851,COG1234	N/A	N/A	N/A	N/A
PHROG	UHGV-1520227_11	phrog_25456	87.7	1e-25	N/A	unknown function
KOfam	UHGV-1520227_12	K07455	171.3	0	recT; recombination protein RecT	N/A
PHROG	UHGV-1520227_12	phrog_148	162.4	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1520227_12	UniRef90_A0A1C5WMV6	374.0	0	p33	N/A
eggNOG-mapper	UHGV-1520227_12	431943.CKL_0416	240.0	0	RecT family	N/A
Pfam	UHGV-1520227_12	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-1520227_12	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-1520227_12	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-1520227_12	PF03837,NF007351,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-1520227_13	phrog_2164	62.8	5.2e-18	N/A	unknown function
KOfam	UHGV-1520227_14	K19171	104.6	9e-31	dndD; DNA sulfur modification protein DndD	N/A
PHROG	UHGV-1520227_14	phrog_77	190.6	0	SbcC-like subunit of palindrome specific endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1520227_14	UniRef90_A0A8D9PGW5	1111.0	0	Chromosome partition protein	N/A
eggNOG-mapper	UHGV-1520227_14	1298920.KI911353_gene2731	281.0	0	nuclear chromosome segregation	N/A
Pfam	UHGV-1520227_14	PF13476	N/A	N/A	AAA domain	AAA_23
COG	UHGV-1520227_14	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-1520227_14	PF02463,MF_00449,NF041034,COG0419	N/A	N/A	N/A	N/A
PHROG	UHGV-1520227_16	phrog_26861	123.5	1e-36	N/A	unknown function
UniRef90	UHGV-1520227_16	UniRef90_A0A8D9PGK1	225.0	0	Single strand binding protein	N/A
eggNOG-mapper	UHGV-1520227_16	1235799.C818_00563	207.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-1520227_16	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1520227_16	NF004476.0	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1520227_16	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1520227_16	PF00436,PF13567,MF_00984,NF004476,COG0629	N/A	N/A	N/A	N/A
COG	UHGV-1520227_19	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
structural_annotation	UHGV-1520227_19	PF10552	N/A	N/A	N/A	N/A
PHROG	UHGV-1520227_22	phrog_463	207.1	0	anti-repressor	transcription regulation
UniRef90	UHGV-1520227_22	UniRef90_A0A8D9PGL6	288.0	0	P22_AR protein	N/A
eggNOG-mapper	UHGV-1520227_22	596329.HMPREF0631_1352	176.0	0	BRO family, N-terminal domain protein	N/A
Pfam	UHGV-1520227_22	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-1520227_22	PF10552	N/A	N/A	ORF6C domain	ORF6C
COG	UHGV-1520227_22	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-1520227_22	PF10552,PF02498,TIGR02681,COG3617	N/A	N/A	N/A	N/A
UniRef90	UHGV-1520227_24	UniRef90_UPI000E4D6E81	82.8	1.65e-19	helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-1520227_24	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1520227_24	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1520227_24	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-1520227_25	phrog_8	46.2	0.00000000000097	transcriptional regulator	transcription regulation
UniRef90	UHGV-1520227_25	UniRef90_UPI001D081DA8	97.8	4.4e-24	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1520227_25	665950.HMPREF1025_02562	91.7	2.57e-22	TRANSCRIPTIONal	N/A
Pfam	UHGV-1520227_25	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-1520227_25	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-1520227_25	PF12844,NF041951,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1520227_26	PF03444,MF_00732,NF003025,COG1321	N/A	N/A	N/A	N/A
KOfam	UHGV-1520227_28	K07273	114.0	1.7e-33	acm; lysozyme	N/A
PHROG	UHGV-1520227_28	phrog_6745	83.7	2.3e-24	endolysin	lysis
UniRef90	UHGV-1520227_28	UniRef90_A0A174GRH8	198.0	0	Autolytic lysozyme	N/A
eggNOG-mapper	UHGV-1520227_28	1235800.C819_00458	214.0	0	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-1520227_28	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-1520227_28	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-1520227_28	PF01183,NF003627,COG3757,COG5492	N/A	N/A	N/A	N/A
PHROG	UHGV-1520227_30	phrog_6616	152.2	2.8026e-45	tail protein	tail
UniRef90	UHGV-1520227_30	UniRef90_A0A8D9PGP3	981.0	0	Minor structural protein	N/A
eggNOG-mapper	UHGV-1520227_30	1294142.CINTURNW_1706	296.0	0	Phage minor structural protein	N/A
Pfam	UHGV-1520227_30	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
COG	UHGV-1520227_30	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1520227_30	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1520227_31	PF07761	N/A	N/A	N/A	N/A
PHROG	UHGV-1520227_32	phrog_1194	66.5	3.6e-19	N/A	unknown function
eggNOG-mapper	UHGV-1520227_32	1232453.BAIF02000058_gene1638	66.2	0.00000000000271	N/A	N/A
structural_annotation	UHGV-1520227_32	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1520227_34	phrog_2657	215.6	0	transcriptional regulator	transcription regulation
UniRef90	UHGV-1520227_34	UniRef90_R7BHB1	335.0	0	Phage regulatory protein Rha family	N/A
eggNOG-mapper	UHGV-1520227_34	33035.JPJF01000043_gene993	301.0	0	N/A	N/A
Pfam	UHGV-1520227_34	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
NCBIFam	UHGV-1520227_34	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
COG	UHGV-1520227_34	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
structural_annotation	UHGV-1520227_34	PF09669,TIGR02681,COG3646	N/A	N/A	N/A	N/A
UniRef90	UHGV-1520227_36	UniRef90_UPI001D0E5D20	63.2	0.00000000000688	CopG family transcriptional regulator	N/A
structural_annotation	UHGV-1520227_36	PF01402,NF041793,COG4453	N/A	N/A	N/A	N/A
UniRef90	UHGV-1520227_38	UniRef90_A0A8D9UIV6	217.0	0	RNAse domain protein	N/A
PHROG	UHGV-1520227_39	phrog_28918	154.1	0	N/A	unknown function
eggNOG-mapper	UHGV-1520227_39	1298920.KI911353_gene2649	273.0	0	tape measure	N/A
COG	UHGV-1520227_39	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
PHROG	UHGV-1520227_41	phrog_36112	68.8	5.9e-20	N/A	unknown function
UniRef90	UHGV-1520227_41	UniRef90_A0A8D9PG71	308.0	0	Tail assembly chaperone protein	N/A
eggNOG-mapper	UHGV-1520227_41	1298920.KI911353_gene2651	118.0	1.56e-31	N/A	N/A
structural_annotation	UHGV-1520227_41	PF10666	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1520227_42	1298920.KI911353_gene2652	65.5	0.0000000000372	N/A	N/A
structural_annotation	UHGV-1520227_42	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1520227_43	PF05657	N/A	N/A	N/A	N/A
UniRef90	UHGV-1520227_44	UniRef90_UPI001BBD4500	62.4	0.00000000549	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1520227_44	476272.RUMHYD_01963	95.1	4.07e-22	N/A	N/A
PHROG	UHGV-1520227_45	phrog_1233	76.7	3.1e-22	N/A	unknown function
eggNOG-mapper	UHGV-1520227_45	357809.Cphy_2967	77.0	1.05e-16	N/A	N/A
eggNOG-mapper	UHGV-1520227_46	1298920.KI911353_gene2656	62.4	0.000000000271	N/A	N/A
structural_annotation	UHGV-1520227_46	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1520227_47	phrog_1129	80.7	1.1e-23	holin	lysis
UniRef90	UHGV-1520227_47	UniRef90_A0A8D9UII9	152.0	0	Holin	N/A
eggNOG-mapper	UHGV-1520227_47	411461.DORFOR_00721	98.2	8.9e-26	N/A	N/A
Pfam	UHGV-1520227_47	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1520227_47	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-1520227_48	phrog_4105	93.8	1.3e-27	N/A	unknown function
eggNOG-mapper	UHGV-1520227_48	411459.RUMOBE_00911	160.0	0	N/A	N/A
eggNOG-mapper	UHGV-1520227_49	397290.C810_01402	70.9	0.0000000000000352	N/A	N/A
UniRef90	UHGV-1520227_50	UniRef90_A0A8D9UIY7	171.0	0	Rho termination factor	N/A
structural_annotation	UHGV-1520227_50	PF21169	N/A	N/A	N/A	N/A
PHROG	UHGV-1520227_51	phrog_544	276.1	0	major head protein	head and packaging
UniRef90	UHGV-1520227_51	UniRef90_A0A8D9PGL1	629.0	0	Major capsid protein	N/A
eggNOG-mapper	UHGV-1520227_51	608534.GCWU000341_02293	329.0	0	N/A	N/A
NCBIFam	UHGV-1520227_51	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-1520227_51	PF05065,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1520227_53	phrog_64	136.3	1.6e-40	portal protein	head and packaging
UniRef90	UHGV-1520227_53	UniRef90_A0A8D9PG58	1054.0	0	Portal protein	N/A
eggNOG-mapper	UHGV-1520227_53	397290.C810_01397	457.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1520227_53	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1520227_53	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
UniRef90	UHGV-1520227_54	UniRef90_A0A8D9UIR9	154.0	0	RimK-related lysine biosynthesis protein	N/A
PHROG	UHGV-1520227_55	phrog_36	67.7	2.2e-19	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-1520227_55	397290.C810_01391	182.0	0	N/A	N/A
structural_annotation	UHGV-1520227_55	PF02996	N/A	N/A	N/A	N/A
PHROG	UHGV-1520227_56	phrog_38	165.0	0	terminase large subunit	head and packaging
UniRef90	UHGV-1520227_56	UniRef90_A0A8D9UIV2	663.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1520227_56	397290.C810_01390	811.0	0	chromosome segregation	N/A
COG	UHGV-1520227_56	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1520227_56	PF17289,PF02562,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
UniRef90	UHGV-1520227_57	UniRef90_UPI0011072322	74.3	0.0000000000000102	N/A	N/A
eggNOG-mapper	UHGV-1520227_57	1256908.HMPREF0373_00479	69.7	0.0000000000001	N/A	N/A
structural_annotation	UHGV-1520227_57	PF14359,COG3613	N/A	N/A	N/A	N/A
UniRef90	UHGV-1520227_63	UniRef90_A0A8D9PGW1	126.0	6.82e-37	HTH psq-type domain-containing protein	N/A
structural_annotation	UHGV-1520227_63	PF05225,COG2886	N/A	N/A	N/A	N/A
PHROG	UHGV-1520227_64	phrog_6493	126.0	2.5e-37	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1520227_64	UniRef90_UPI00148DB0F2	118.0	8.93e-28	DnaD domain protein	N/A
eggNOG-mapper	UHGV-1520227_64	1246955.MCYN_0658	125.0	2.97e-33	N/A	N/A
COG	UHGV-1520227_64	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1520227_64	PF07106,NF040642,COG3355	N/A	N/A	N/A	N/A
PHROG	UHGV-1520227_67	phrog_229	117.5	8.9e-35	MazG-like pyrophosphatase	other
UniRef90	UHGV-1520227_67	UniRef90_R7BGE2	170.0	0	MazG nucleotide pyrophosphohydrolase domain	N/A
eggNOG-mapper	UHGV-1520227_67	428125.CLOLEP_01391	97.4	2.13e-24	MazG nucleotide pyrophosphohydrolase domain	N/A
Pfam	UHGV-1520227_67	PF03819	N/A	N/A	MazG nucleotide pyrophosphohydrolase domain	MazG
COG	UHGV-1520227_67	COG1694	N/A	N/A	NTP pyrophosphatase, house-cleaning of non-canonical NTPs	N/A
structural_annotation	UHGV-1520227_67	PF03819,MF_01020,TIGR03188,COG1694	N/A	N/A	N/A	N/A
UniRef90	UHGV-1520227_68	UniRef90_A0A8D9UIS5	151.0	5.55054e-42	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-1520227_68	658655.HMPREF0988_00895	140.0	1.08e-39	N/A	N/A
KOfam	UHGV-1520227_71	K07727	41.6	0.000000000028	K07727; putative transcriptional regulator	N/A
UniRef90	UHGV-1520227_71	UniRef90_A0A3E5AKX4	127.0	4.85e-37	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1520227_71	1235799.C818_04243	122.0	8.06e-36	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-1520227_71	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-1520227_71	PF13443,NF000090,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-1520227_72	phrog_11100	97.8	6.6e-29	N/A	unknown function
eggNOG-mapper	UHGV-1520227_72	1283077.M1ICI7_9CAUD	51.6	0.00000109	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1520227	Yes	44,807	36	79	1