vOTU vOTU-107912

vOTU: vOTU-107912

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-107912
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → CAG-194 → CAG-194 sp000432915
Taxonomy (UHGV)	vFAM-00010 → vSUBFAM-05178 → vGENUS-10604 → vOTU-107912
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae
Host range breadth	Family
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1465081
Biosample ID	N/A
Genome length (bp)	22,558 bps
CheckV completeness	53.69% (Medium-quality)
CDS count	30
CDS density	94.22%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae	Total connections	138	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → CAG-194 → CAG-194 sp000432915	Total connections	29	Host agreement	93.1

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 53.69)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1465081_1	phrog_16304	78.2	1.4e-22	N/A	unknown function
UniRef90	UHGV-1465081_1	UniRef90_A0A1Q9J518	164.0	0	N/A	N/A
eggNOG-mapper	UHGV-1465081_1	1235790.C805_00030	139.0	1.16e-38	N/A	N/A
COG	UHGV-1465081_1	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
PHROG	UHGV-1465081_2	phrog_244	76.6	3.6e-22	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1465081_2	537007.BLAHAN_05460	105.0	1.14e-26	N/A	N/A
PHROG	UHGV-1465081_3	phrog_20593	48.7	0.000000000000086	N/A	unknown function
PHROG	UHGV-1465081_5	phrog_874	163.5	0	N/A	unknown function
eggNOG-mapper	UHGV-1465081_5	411468.CLOSCI_00298	227.0	0	N/A	N/A
structural_annotation	UHGV-1465081_5	PF04266,MF_00684,NF003443,COG4405	N/A	N/A	N/A	N/A
PHROG	UHGV-1465081_6	phrog_424	97.1	1.6e-28	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1465081_6	UniRef90_A0A2H4JC51	580.0	0	Putative 3'-phosphoadenosine 5'-phosphosulfatesulfotransferase/FAD synthetase-related enzyme	N/A
eggNOG-mapper	UHGV-1465081_6	411461.DORFOR_01142	587.0	0	N/A	N/A
COG	UHGV-1465081_6	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1465081_6	PF01507,MF_00063,TIGR00434,COG0175	N/A	N/A	N/A	N/A
KOfam	UHGV-1465081_7	K00571	95.6	5.6e-28	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-1465081_7	phrog_16	229.9	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1465081_7	UniRef90_A0A173S745	1564.0	0	Putative methyltransferase	N/A
eggNOG-mapper	UHGV-1465081_7	1298920.KI911353_gene2709	1377.0	0	DEAD-like helicases superfamily	N/A
Pfam	UHGV-1465081_7	PF00176	N/A	N/A	SNF2-related domain	SNF2-rel_dom
Pfam	UHGV-1465081_7	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-1465081_7	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
structural_annotation	UHGV-1465081_7	PF01555,PF16203,PF04851,MF_01821,MF_00472,NF041790,NF008572,COG0553,COG0863	N/A	N/A	N/A	N/A
KOfam	UHGV-1465081_9	K00558	231.6	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1465081_9	phrog_116	270.6	0	DNA methyltransferase	other
UniRef90	UHGV-1465081_9	UniRef90_A0A174GZ53	944.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-1465081_9	1235800.C819_02255	712.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-1465081_9	MTase_II_00020	116.8	1.9e-38	Type II methyltransferase	RM
Pfam	UHGV-1465081_9	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-1465081_9	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1465081_9	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-1465081_10	phrog_478	117.2	9e-35	site-specific recombination directionality factor RDF	integration and excision
UniRef90	UHGV-1465081_10	UniRef90_R6E548	122.0	1.47e-33	Prophage pi1 protein 29	N/A
eggNOG-mapper	UHGV-1465081_10	1111121.HMPREF1247_0834	99.8	3.7e-25	N/A	N/A
KOfam	UHGV-1465081_14	K07474	109.7	5.2e-32	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1465081_14	phrog_2606	278.0	0	terminase small subunit	head and packaging
UniRef90	UHGV-1465081_14	UniRef90_UPI00164AF8F0	404.0	0	terminase small subunit	N/A
eggNOG-mapper	UHGV-1465081_14	411461.DORFOR_01162	186.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-1465081_14	PF13384	N/A	N/A	Homeodomain-like domain	HTH_23
Pfam	UHGV-1465081_14	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1465081_14	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1465081_14	PF03592,PF10668,NF040601,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-1465081_15	K06909	66.6	3.4e-19	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1465081_15	phrog_2	86.4	5.2e-25	terminase large subunit	head and packaging
UniRef90	UHGV-1465081_15	UniRef90_A0A373K1N0	817.0	0	Terminase_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1465081_15	1235790.C805_00040	530.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-1465081_15	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-1465081_15	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1465081_15	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1465081_16	phrog_533	242.2	0	portal protein	head and packaging
UniRef90	UHGV-1465081_16	UniRef90_A0A3E3HWH0	586.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1465081_16	645991.Sgly_0336	138.0	3.63e-33	N/A	N/A
structural_annotation	UHGV-1465081_16	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1465081_17	phrog_581	253.1	0	minor head protein	head and packaging
UniRef90	UHGV-1465081_17	UniRef90_UPI00164C8416	311.0	0	polymorphic toxin type 50 domain-containing protein	N/A
eggNOG-mapper	UHGV-1465081_17	903814.ELI_3213	175.0	2.8026e-45	Phage minor capsid protein 2	N/A
Pfam	UHGV-1465081_17	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1465081_17	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1465081_17	PF06152,PF15542,TIGR01641	N/A	N/A	N/A	N/A
PHROG	UHGV-1465081_19	phrog_3675	112.5	1.7e-33	N/A	unknown function
UniRef90	UHGV-1465081_19	UniRef90_UPI001C02868E	142.0	7.88931e-42	YjcQ family protein	N/A
eggNOG-mapper	UHGV-1465081_19	1235799.C818_04221	139.0	2.06005e-41	YjcQ protein	N/A
Pfam	UHGV-1465081_19	PF09639	N/A	N/A	YjcQ protein	YjcQ
structural_annotation	UHGV-1465081_19	PF09639,TIGR04176,COG2345	N/A	N/A	N/A	N/A
PHROG	UHGV-1465081_21	phrog_194	79.4	6.5e-23	head scaffolding protein	head and packaging
UniRef90	UHGV-1465081_21	UniRef90_A0A174GWW4	219.0	0	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-1465081_21	742765.HMPREF9457_02126	111.0	4.43e-28	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-1465081_21	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-1465081_21	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1465081_22	phrog_212	203.7	0	major head protein	head and packaging
UniRef90	UHGV-1465081_22	UniRef90_A0A350VVC8	347.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-1465081_22	552396.HMPREF0863_00277	323.0	0	N/A	N/A
structural_annotation	UHGV-1465081_22	PF05065,MF_04119,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1465081_23	phrog_541	68.4	1.1e-19	head-tail adaptor	connector
PHROG	UHGV-1465081_24	phrog_3366	98.8	5e-29	N/A	unknown function
eggNOG-mapper	UHGV-1465081_24	645991.Sgly_0343	63.5	0.0000000000561	N/A	N/A
Pfam	UHGV-1465081_24	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-1465081_24	PF20536,TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-1465081_25	phrog_556	40.8	0.000000000038	minor head protein	head and packaging
eggNOG-mapper	UHGV-1465081_25	1304866.K413DRAFT_0781	55.1	0.00000000951	Minor capsid protein	N/A
PHROG	UHGV-1465081_26	phrog_3266	89.2	3.9e-26	tail completion	connector
eggNOG-mapper	UHGV-1465081_26	1151292.QEW_4531	52.4	0.00000131	N/A	N/A
structural_annotation	UHGV-1465081_26	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-1465081_27	phrog_3099	62.4	9.6e-18	N/A	unknown function
eggNOG-mapper	UHGV-1465081_27	33035.JPJF01000106_gene3126	90.1	3.22e-21	N/A	N/A
structural_annotation	UHGV-1465081_27	PF08813,TIGR02126,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-1465081_28	phrog_11299	75.0	1.2e-21	N/A	unknown function
structural_annotation	UHGV-1465081_28	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1465081_29	phrog_706	122.8	2.9e-36	N/A	unknown function
UniRef90	UHGV-1465081_29	UniRef90_A0A1I0K8S4	174.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-1465081_29	411902.CLOBOL_00127	167.0	0	N/A	N/A
Pfam	UHGV-1465081_29	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1465081_29	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1465081_30	phrog_1535	170.1	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1465081_30	1321778.HMPREF1982_02681	77.8	0.00000000000287	SLT domain	N/A
COG	UHGV-1465081_30	COG1511	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1465081	Yes	22,558	43	54	1