vOTU vOTU-107995

vOTU: vOTU-107995

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-107995
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00010 → vSUBFAM-01585 → vGENUS-01628 → vOTU-107995
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae
Host range breadth	Family
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0004798
Biosample ID	SAMEA4765628
Genome length (bp)	23,471 bps
CheckV completeness	52.44% (Medium-quality)
CDS count	28
CDS density	96.49%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae	Total connections	27	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → CAG-590 → CAG-590 sp000431135	Total connections	27	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 52.44)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0004798_1	K03744	93.1	3.9e-27	lemA; LemA protein	N/A
PHROG	UHGV-0004798_1	phrog_1383	103.0	2.4e-30	virion structural protein	head and packaging
UniRef90	UHGV-0004798_1	UniRef90_A0A414ZQW9	226.0	0	LemA family protein	N/A
eggNOG-mapper	UHGV-0004798_1	742735.HMPREF9467_00879	213.0	0	LemA family	N/A
Pfam	UHGV-0004798_1	PF04011	N/A	N/A	LemA family	LemA
COG	UHGV-0004798_1	COG1704	N/A	N/A	Magnetosome formation protein MamQ, lipoprotein antigen LemA family	N/A
structural_annotation	UHGV-0004798_1	PF04011,NF040966,COG1704	N/A	N/A	N/A	N/A
PHROG	UHGV-0004798_2	phrog_3886	311.5	0	N/A	unknown function
eggNOG-mapper	UHGV-0004798_2	742733.HMPREF9469_05056	358.0	0	N/A	N/A
eggNOG-mapper	UHGV-0004798_3	476272.RUMHYD_03338	47.8	0.00000674	N/A	N/A
PHROG	UHGV-0004798_5	phrog_9300	101.0	1.3e-29	N/A	unknown function
PHROG	UHGV-0004798_6	phrog_17690	109.2	2.2e-32	N/A	unknown function
UniRef90	UHGV-0004798_6	UniRef90_A0A6L5XWF4	105.0	1.25e-26	3-dehydroquinate synthase	N/A
eggNOG-mapper	UHGV-0004798_6	33035.JPJF01000123_gene2433	101.0	7.22e-26	N/A	N/A
KOfam	UHGV-0004798_7	K07474	113.9	2.4e-33	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0004798_7	phrog_2606	258.6	0	terminase small subunit	head and packaging
UniRef90	UHGV-0004798_7	UniRef90_A0A3D2KJS5	348.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0004798_7	1122947.FR7_2522	174.0	0	Terminase small subunit	N/A
Pfam	UHGV-0004798_7	PF06056	N/A	N/A	Putative ATPase subunit of terminase (gpP-like)	Terminase_5
Pfam	UHGV-0004798_7	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0004798_7	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0004798_7	PF03592,PF10668,NF040601,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-0004798_8	K06909	116.3	3.2e-34	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0004798_8	phrog_10250	166.4	0	N/A	unknown function
UniRef90	UHGV-0004798_8	UniRef90_A0A3D2KEK1	799.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0004798_8	397290.C810_05187	617.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0004798_8	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0004798_8	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0004798_8	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0004798_8	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0004798_9	phrog_533	307.5	0	portal protein	head and packaging
UniRef90	UHGV-0004798_9	UniRef90_A0A3D2KHB8	875.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0004798_9	476272.RUMHYD_01758	443.0	0	phage minor capsid protein	N/A
structural_annotation	UHGV-0004798_9	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0004798_10	phrog_581	247.4	0	minor head protein	head and packaging
UniRef90	UHGV-0004798_10	UniRef90_A0A6L5YIK0	231.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0004798_10	642492.Clole_0816	223.0	0	N/A	N/A
Pfam	UHGV-0004798_10	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0004798_10	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0004798_10	PF06152,PF18812	N/A	N/A	N/A	N/A
UniRef90	UHGV-0004798_12	UniRef90_A0A3D2KFX8	120.0	5.88e-35	Conjugal transfer protein	N/A
eggNOG-mapper	UHGV-0004798_12	663278.Ethha_1948	52.0	0.0000000241	Cysteine-rich KTR	N/A
Pfam	UHGV-0004798_12	PF14205	N/A	N/A	Cysteine-rich KTR	Cys_rich_KTR
PHROG	UHGV-0004798_13	phrog_194	88.9	6.8e-26	head scaffolding protein	head and packaging
UniRef90	UHGV-0004798_13	UniRef90_UPI001D14C9C8	124.0	7.48e-32	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0004798_13	476272.RUMHYD_01775	132.0	1.06e-35	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-0004798_13	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
PHROG	UHGV-0004798_14	phrog_247	290.2	0	major head protein	head and packaging
UniRef90	UHGV-0004798_14	UniRef90_A0A3D2KEW4	700.0	0	Phage coat protein	N/A
eggNOG-mapper	UHGV-0004798_14	1292035.H476_1014	420.0	0	N/A	N/A
COG	UHGV-0004798_14	COG1106	N/A	N/A	ATPase/GTPase, AAA15 family	N/A
structural_annotation	UHGV-0004798_14	PF20036,MF_04113,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0004798_15	phrog_541	107.2	1e-31	head-tail adaptor	connector
eggNOG-mapper	UHGV-0004798_15	641112.ACOK01000073_gene2896	60.1	0.00000000179	N/A	N/A
PHROG	UHGV-0004798_16	phrog_3366	104.7	7.4e-31	N/A	unknown function
eggNOG-mapper	UHGV-0004798_16	33035.JPJF01000106_gene3129	68.6	0.000000000000404	N/A	N/A
structural_annotation	UHGV-0004798_16	PF20536,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0004798_17	phrog_556	109.9	1.3e-32	minor head protein	head and packaging
UniRef90	UHGV-0004798_17	UniRef90_F2JQ09	79.7	3.35e-16	Minor capsid	N/A
eggNOG-mapper	UHGV-0004798_17	642492.Clole_0824	79.7	5.62e-17	Minor capsid protein	N/A
Pfam	UHGV-0004798_17	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0004798_17	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0004798_18	phrog_3266	108.4	4.4e-32	tail completion	connector
eggNOG-mapper	UHGV-0004798_18	1232443.BAIA02000078_gene24	63.2	0.000000000133	N/A	N/A
structural_annotation	UHGV-0004798_18	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0004798_19	phrog_3099	148.4	3.36312e-44	N/A	unknown function
eggNOG-mapper	UHGV-0004798_19	1160721.RBI_II00532	196.0	0	N/A	N/A
structural_annotation	UHGV-0004798_19	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0004798_20	phrog_11299	162.0	0	N/A	unknown function
eggNOG-mapper	UHGV-0004798_20	411459.RUMOBE_01382	68.6	0.00000000000112	N/A	N/A
structural_annotation	UHGV-0004798_20	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0004798_21	phrog_706	129.0	3.2e-38	N/A	unknown function
UniRef90	UHGV-0004798_21	UniRef90_A0A1M7NJ66	129.0	1.07e-34	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-0004798_21	1120998.AUFC01000030_gene2243	77.0	0.00000000000000449	N/A	N/A
Pfam	UHGV-0004798_21	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0004798_21	PF06854	N/A	N/A	N/A	N/A
KOfam	UHGV-0004798_22	K10421	49.0	0.000000000000045	CLIP1, RSN; CAP-Gly domain-containing linker protein 1	N/A
PHROG	UHGV-0004798_22	phrog_1535	200.1	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0004798_22	1232453.BAIF02000058_gene1637	115.0	5.72e-23	phage tail tape measure protein	N/A
COG	UHGV-0004798_22	COG5412	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-0004798_23	phrog_1194	86.2	3.1e-25	N/A	unknown function
eggNOG-mapper	UHGV-0004798_23	877414.ATWA01000001_gene917	58.9	0.000000002	N/A	N/A
structural_annotation	UHGV-0004798_23	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0004798_24	phrog_2566	73.2	2.7e-21	N/A	unknown function
PHROG	UHGV-0004798_26	phrog_16267	48.6	3.9e-22	N/A	unknown function
eggNOG-mapper	UHGV-0004798_26	397291.C804_01133	90.9	0.00000000000000283	N/A	N/A
Pfam	UHGV-0004798_26	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
structural_annotation	UHGV-0004798_26	PF05113,PF03944,NF033848,NF033675,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0004798_27	phrog_199	51.0	0.000000000000017	holin	lysis
UniRef90	UHGV-0004798_27	UniRef90_A0A3D2KH74	290.0	0	Holin	N/A
eggNOG-mapper	UHGV-0004798_27	411468.CLOSCI_00532	174.0	0	toxin secretion phage lysis holin	N/A
Pfam	UHGV-0004798_27	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0004798_27	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-0004798_27	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-0004798_27	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
KOfam	UHGV-0004798_28	K01185	142.7	3.39955e-42	E3.2.1.17; lysozyme [EC:3.2.1.17]	N/A
PHROG	UHGV-0004798_28	phrog_7	178.1	0	endolysin	lysis
UniRef90	UHGV-0004798_28	UniRef90_R5EB79	372.0	0	Lysozyme	N/A
eggNOG-mapper	UHGV-0004798_28	397291.C804_01109	164.0	1.4013e-45	Phage lysozyme	N/A
Pfam	UHGV-0004798_28	PF00959	N/A	N/A	Phage lysozyme	Phage_lysozyme
COG	UHGV-0004798_28	COG3584	N/A	N/A	3D (Asp-Asp-Asp) domain, usually in lytic transglycosylases	N/A
HAMAP	UHGV-0004798_28	MF_04110	N/A	N/A	Endolysin	N/A
structural_annotation	UHGV-0004798_28	PF00959,PF18342,MF_04110,COG3772,COG4991	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0004798	Yes	23,471	41	52	1