vOTU vOTU-108465

vOTU: vOTU-108465

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-108465
Number of genomes	1
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00022 → vSUBFAM-03336 → vGENUS-19285 → vOTU-108465
Host lineage
Host range breadth
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0115406
Biosample ID	SAMEA4378301
Genome length (bp)	20,272 bps
CheckV completeness	66.32% (Medium-quality)
CDS count	35
CDS density	90.64%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method
CRISPR-predicted host lineage	Total connections	Host agreement
PHIST-predicted host lineage	Total connections	Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 66.32)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0115406_1	phrog_1067	176.5	0	minor head protein	head and packaging
UniRef90	UHGV-0115406_1	UniRef90_A0A2V2F1H4	195.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0115406_1	1123263.AUKY01000068_gene489	214.0	0	Phage minor structural protein	N/A
NCBIFam	UHGV-0115406_1	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0115406_1	COG4926	N/A	N/A	Phage-related protein	N/A
KOfam	UHGV-0115406_2	K07339	75.4	5.9e-22	hicA; mRNA interferase HicA [EC:3.1.-.-]	N/A
PHROG	UHGV-0115406_2	phrog_353	56.7	3.4e-16	toxin	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0115406_2	UniRef90_A0A316NM27	110.0	8.35e-31	Toxin-antitoxin system, toxin component, HicA family protein	N/A
eggNOG-mapper	UHGV-0115406_2	411460.RUMTOR_02081	87.0	2.88e-22	HicA toxin of bacterial toxin-antitoxin,	N/A
Pfam	UHGV-0115406_2	PF07927	N/A	N/A	HicA toxin of bacterial toxin-antitoxin,	HicA_toxin
COG	UHGV-0115406_2	COG1724	N/A	N/A	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	N/A
structural_annotation	UHGV-0115406_2	PF07927,COG1724	N/A	N/A	N/A	N/A
KOfam	UHGV-0115406_3	K18843	53.1	0.0000000000000077	hicB; antitoxin HicB	N/A
PHROG	UHGV-0115406_3	phrog_497	73.8	3.2e-21	toxin-antitoxin system HicB-like	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0115406_3	UniRef90_A0A316NLB7	217.0	0	HicB family protein	N/A
eggNOG-mapper	UHGV-0115406_3	1122925.KB895394_gene1703	162.0	0	HicB_like antitoxin of bacterial toxin-antitoxin system	N/A
Pfam	UHGV-0115406_3	PF15919	N/A	N/A	HicB_like antitoxin of bacterial toxin-antitoxin system	HicB_lk_antitox
COG	UHGV-0115406_3	COG1598	N/A	N/A	Antitoxin component HicB of the HicAB toxin-antitoxin system	N/A
structural_annotation	UHGV-0115406_3	PF15919,COG1598	N/A	N/A	N/A	N/A
PHROG	UHGV-0115406_4	phrog_33	92.3	9.1e-27	distal tail protein Dit	tail
UniRef90	UHGV-0115406_4	UniRef90_A0A1C6H6D2	309.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0115406_4	1160721.RBI_I01575	156.0	1.4013e-44	Phage tail protein	N/A
COG	UHGV-0115406_4	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0115406_4	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0115406_5	phrog_23464	255.1	0	N/A	unknown function
UniRef90	UHGV-0115406_5	UniRef90_A0A1C6H5M9	716.0	0	Phage-related minor tail protein	N/A
eggNOG-mapper	UHGV-0115406_5	33035.JPJF01000023_gene3232	292.0	0	phage tail tape measure protein	N/A
Pfam	UHGV-0115406_5	PF05017	N/A	N/A	TMP repeat	TMP
COG	UHGV-0115406_5	COG5412	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0115406_5	PF20155,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0115406_6	phrog_709	115.0	4.5e-34	N/A	unknown function
eggNOG-mapper	UHGV-0115406_6	411471.SUBVAR_05858	157.0	0	N/A	N/A
structural_annotation	UHGV-0115406_6	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-0115406_7	phrog_88	163.7	0	major tail protein	tail
UniRef90	UHGV-0115406_7	UniRef90_A0A1C6H6F0	310.0	0	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-0115406_7	1226322.HMPREF1545_00121	187.0	0	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-0115406_7	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0115406_7	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0115406_8	phrog_78	48.5	0.00000000000018	tail terminator	connector
UniRef90	UHGV-0115406_8	UniRef90_U2SBX3	135.0	1.75e-39	HTH merR-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0115406_8	1226322.HMPREF1545_00120	135.0	2.93999e-40	N/A	N/A
structural_annotation	UHGV-0115406_8	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-0115406_9	phrog_5	44.6	0.0000000000037	tail completion or Neck1 protein	connector
UniRef90	UHGV-0115406_9	UniRef90_UPI00073E355A	151.0	7.00649e-45	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0115406_9	411471.SUBVAR_05855	139.0	4.39994e-41	N/A	N/A
Pfam	UHGV-0115406_9	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0115406_9	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0115406_10	phrog_1951	89.9	1.9e-26	head-tail adaptor	connector
UniRef90	UHGV-0115406_10	UniRef90_A0A8J6P6R3	154.0	0	Phage head-tail adapter protein	N/A
eggNOG-mapper	UHGV-0115406_10	411471.SUBVAR_05854	142.0	8.67404e-43	N/A	N/A
structural_annotation	UHGV-0115406_10	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0115406_11	phrog_5223	89.5	2.1e-26	neck protein	connector
UniRef90	UHGV-0115406_11	UniRef90_A0A8J6P3F9	149.0	4.2039e-45	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-0115406_11	411471.SUBVAR_05853	134.0	4.94e-40	N/A	N/A
NCBIFam	UHGV-0115406_11	TIGR01560.2	N/A	N/A	head-tail connector protein	N/A
structural_annotation	UHGV-0115406_11	TIGR01560	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0115406_12	476272.RUMHYD_02855	150.0	4.2039e-45	N/A	N/A
PHROG	UHGV-0115406_13	phrog_10	152.8	2.8026e-45	major head protein	head and packaging
UniRef90	UHGV-0115406_13	UniRef90_UPI00073E62C9	552.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-0115406_13	626523.GCWU000342_01025	305.0	0	Phage capsid family	N/A
Pfam	UHGV-0115406_13	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0115406_13	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0115406_13	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0115406_13	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0115406_14	K06904	135.6	4.79999e-40	N/A	N/A
PHROG	UHGV-0115406_14	phrog_80	147.6	1.20512e-43	head maturation protease	head and packaging
UniRef90	UHGV-0115406_14	UniRef90_A0A1V5IPN6	229.0	0	Caudovirus prohead protease	N/A
eggNOG-mapper	UHGV-0115406_14	1203606.HMPREF1526_01338	209.0	0	Caudovirus prohead serine protease	N/A
Pfam	UHGV-0115406_14	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-0115406_14	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-0115406_14	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0115406_14	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0115406_15	phrog_12	128.3	4.5e-38	portal protein	head and packaging
UniRef90	UHGV-0115406_15	UniRef90_A0A8J6PFS2	675.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0115406_15	411471.SUBVAR_05850	647.0	0	Phage portal protein	N/A
Pfam	UHGV-0115406_15	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-0115406_15	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0115406_15	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0115406_16	phrog_9	328.8	0	terminase large subunit	head and packaging
UniRef90	UHGV-0115406_16	UniRef90_A0A8J6TY49	984.0	0	Terminase large subunit	N/A
eggNOG-mapper	UHGV-0115406_16	411471.SUBVAR_05848	851.0	0	large subunit	N/A
Pfam	UHGV-0115406_16	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0115406_16	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0115406_16	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0115406_16	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0115406_17	phrog_1066	97.9	7.7e-29	N/A	unknown function
eggNOG-mapper	UHGV-0115406_17	1094508.Tsac_2428	114.0	2.18e-31	N/A	N/A
structural_annotation	UHGV-0115406_17	PF05119,TIGR01558	N/A	N/A	N/A	N/A
PHROG	UHGV-0115406_18	phrog_11237	60.7	3.2e-17	N/A	unknown function
eggNOG-mapper	UHGV-0115406_18	537013.CLOSTMETH_01096	57.4	0.00000000939	N/A	N/A
PHROG	UHGV-0115406_22	phrog_924	54.0	0.0000000000000038	N/A	unknown function
UniRef90	UHGV-0115406_22	UniRef90_A0A6C0R0N0	62.0	0.0000000000165	N/A	N/A
Pfam	UHGV-0115406_22	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0115406_22	NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-0115406_24	phrog_986	98.9	4.1e-29	RNA-binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0115406_24	UniRef90_A0A413DGU9	118.0	9.09e-33	N/A	N/A
eggNOG-mapper	UHGV-0115406_24	1204534.J9QD24_9CAUD	83.2	7.13e-20	N/A	N/A
Pfam	UHGV-0115406_24	PF12961	N/A	N/A	N/A	DUF3850
structural_annotation	UHGV-0115406_24	PF12961,MF_00684,NF003443,COG4043	N/A	N/A	N/A	N/A
PHROG	UHGV-0115406_25	phrog_38832	47.3	0.000000000000014	N/A	unknown function
eggNOG-mapper	UHGV-0115406_25	665956.HMPREF1032_00143	58.2	0.0000000182	N/A	N/A
PHROG	UHGV-0115406_28	phrog_424	88.7	8e-26	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0115406_28	UniRef90_UPI00195807E8	325.0	0	phosphoadenosine phosphosulfate reductase	N/A
eggNOG-mapper	UHGV-0115406_28	411476.BACOVA_03904	239.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
COG	UHGV-0115406_28	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
KOfam	UHGV-0115406_29	K00571	85.5	8.3e-25	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0115406_29	phrog_67	84.6	1.4e-24	DNA methyltransferase	other
UniRef90	UHGV-0115406_29	UniRef90_A0A371ATQ7	142.0	3.89981e-42	Site-specific DNA-methyltransferase	N/A
eggNOG-mapper	UHGV-0115406_29	658655.HMPREF0988_00878	139.0	7.48001e-40	DNA methylase	N/A
PADLOC	UHGV-0115406_29	MTase_II_00157	70.3	5.9e-20	Type II methyltransferase	RM
Pfam	UHGV-0115406_29	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0115406_29	COG0863	N/A	N/A	DNA modification methylase	N/A
KOfam	UHGV-0115406_30	K01160	62.9	8.7e-18	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0115406_30	phrog_34	69.6	5.2e-20	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0115406_30	UniRef90_A0A7X1IAL0	143.0	3.79051e-42	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0115406_30	697281.Mahau_0558	61.2	0.000000000195	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC	N/A
COG	UHGV-0115406_30	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0115406_30	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-0115406_31	K03111	130.7	1.8e-38	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0115406_31	phrog_44	137.6	8.19998e-41	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0115406_31	UniRef90_A0A6S6XI86	176.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0115406_31	1105031.HMPREF1141_2832	169.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0115406_31	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0115406_31	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0115406_31	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0115406_31	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0115406_31	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0115406_32	phrog_2562	156.2	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0115406_32	UniRef90_A0A1C6GFP7	192.0	0	N/A	N/A
eggNOG-mapper	UHGV-0115406_32	1196322.A370_04251	179.0	0	N/A	N/A
Pfam	UHGV-0115406_32	PF14297	N/A	N/A	Lin1244/Lin1753-like, N-terminal	Lin1244_N
COG	UHGV-0115406_32	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0115406_32	PF14297,TIGR01714	N/A	N/A	N/A	N/A
PHROG	UHGV-0115406_33	phrog_7370	63.9	2.5e-18	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0115406_33	UniRef90_A0A3D0LZU3	131.0	1.51e-37	HNH domain-containing protein	N/A
Pfam	UHGV-0115406_33	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0115406_33	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-0115406_34	phrog_72	61.2	1.8e-17	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0115406_34	1304866.K413DRAFT_1197	160.0	0	N/A	N/A
structural_annotation	UHGV-0115406_34	PF05772,NF007281	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0115406	Yes	20,272	52	66	1