vOTU vOTU-109131

vOTU: vOTU-109131

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-109131
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → Clostridium_A → Clostridium_A leptum
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-02423 → vGENUS-02934 → vOTU-109131
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → Clostridium_A → Clostridium_A leptum
Host range breadth	Species
Lifestyle	temperate (Evidence: integrase)

Representative genome
Genome ID	UHGV-1929332
Biosample ID	N/A
Genome length (bp)	24,469 bps
CheckV completeness	75.13% (Medium-quality)
CDS count	30
CDS density	92.97%
tRNA count	0
Integrase	Yes
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage		Total connections		Host agreement
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → Clostridium_A → Clostridium_A leptum	Total connections	71	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 75.13)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1929332_1	K03722	245.6	0	dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]	N/A
PHROG	UHGV-1929332_1	phrog_2488	98.4	6.3e-29	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1929332_1	UniRef90_A0A372UYZ1	373.0	0	ATP-dependent DNA helicase (Fragment)	N/A
eggNOG-mapper	UHGV-1929332_1	428125.CLOLEP_02299	604.0	0	HELICc2	N/A
PADLOC	UHGV-1929332_1	DinG	184.0	0	CAS-IV-A; associated	CRISPR-CAS
Pfam	UHGV-1929332_1	PF13307	N/A	N/A	Helicase C-terminal domain	Helicase_C_2
COG	UHGV-1929332_1	COG1199	N/A	N/A	Rad3-related DNA helicase DinG	N/A
UniRef90	UHGV-1929332_2	UniRef90_A7VUQ4	274.0	0	Resolvase/invertase-type recombinase catalytic domain-containing protein	N/A
Pfam	UHGV-1929332_2	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
KOfam	UHGV-1929332_3	K06400	42.5	0.0000000000073	spoIVCA; site-specific DNA recombinase	N/A
UniRef90	UHGV-1929332_3	UniRef90_A0A1Y3SMX5	267.0	0	Resolvase/invertase-type recombinase catalytic domain-containing protein	N/A
eggNOG-mapper	UHGV-1929332_3	428125.CLOLEP_02303	174.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-1929332_3	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
structural_annotation	UHGV-1929332_3	PF00239,NF033518,COG1961	N/A	N/A	N/A	N/A
KOfam	UHGV-1929332_4	K06400	358.3	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1929332_4	phrog_95	408.1	0	integrase	integration and excision
UniRef90	UHGV-1929332_4	UniRef90_A0A1Y3SPM4	989.0	0	Recombinase family protein	N/A
eggNOG-mapper	UHGV-1929332_4	428125.CLOLEP_02306	701.0	0	Site-specific recombinases DNA invertase Pin homologs	N/A
Pfam	UHGV-1929332_4	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1929332_4	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-1929332_4	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-1929332_4	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1929332_4	PF00239,PF07508,PF18822,NF041201,COG1961	N/A	N/A	N/A	N/A
KOfam	UHGV-1929332_5	K06400	92.6	4.5e-27	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1929332_5	phrog_95	76.6	2.9e-23	integrase	integration and excision
UniRef90	UHGV-1929332_5	UniRef90_A0A1Y3SPP1	538.0	0	Recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-1929332_5	428125.CLOLEP_02307	338.0	0	Recombinase	N/A
Pfam	UHGV-1929332_5	PF07508	N/A	N/A	Recombinase	Recombinase
structural_annotation	UHGV-1929332_5	PF07508,NF041201	N/A	N/A	N/A	N/A
KOfam	UHGV-1929332_6	K06400	350.2	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1929332_6	phrog_95	413.1	0	integrase	integration and excision
UniRef90	UHGV-1929332_6	UniRef90_A7VUR1	1020.0	0	Recombinase family protein	N/A
eggNOG-mapper	UHGV-1929332_6	428125.CLOLEP_02308	1020.0	0	N/A	N/A
Pfam	UHGV-1929332_6	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1929332_6	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-1929332_6	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-1929332_6	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1929332_6	PF00239,PF07508,PF18822,NF041201,COG1961	N/A	N/A	N/A	N/A
KOfam	UHGV-1929332_7	K07217	266.0	0	K07217; Mn-containing catalase	N/A
PHROG	UHGV-1929332_7	phrog_7573	309.6	0	N/A	unknown function
UniRef90	UHGV-1929332_7	UniRef90_A0A7U9R964	409.0	0	Putative manganese catalase	N/A
eggNOG-mapper	UHGV-1929332_7	1235798.C817_04379	406.0	0	PFAM Manganese containing catalase	N/A
Pfam	UHGV-1929332_7	PF05067	N/A	N/A	Manganese containing catalase	Mn_catalase
COG	UHGV-1929332_7	COG3546	N/A	N/A	Mn-containing catalase (includes spore coat protein CotJC)	N/A
eggNOG-mapper	UHGV-1929332_8	742740.HMPREF9474_03518	59.3	0.0000000117	N/A	N/A
PHROG	UHGV-1929332_9	phrog_18725	45.2	0.0000000000012	N/A	unknown function
eggNOG-mapper	UHGV-1929332_9	665956.HMPREF1032_02705	101.0	1.1e-25	N/A	N/A
PHROG	UHGV-1929332_10	phrog_13879	275.0	0	N/A	unknown function
eggNOG-mapper	UHGV-1929332_10	1304866.K413DRAFT_0774	59.3	0.00000437	N/A	N/A
structural_annotation	UHGV-1929332_10	PF03256,PF16466,PF13550,MF_00813,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1929332_11	phrog_1194	58.7	9.1e-17	N/A	unknown function
eggNOG-mapper	UHGV-1929332_11	742740.HMPREF9474_03515	61.6	0.000000000208	N/A	N/A
Pfam	UHGV-1929332_11	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-1929332_11	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1929332_12	phrog_1535	137.3	0	tail length tape measure protein	tail
UniRef90	UHGV-1929332_12	UniRef90_A0A1C6HCQ7	1255.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1929332_12	1122918.KB907248_gene4489	94.4	7.48e-17	minor tail protein	N/A
COG	UHGV-1929332_12	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-1929332_13	phrog_8355	95.4	2.3e-28	N/A	unknown function
UniRef90	UHGV-1929332_13	UniRef90_UPI0018A7EA5D	132.0	2.48e-37	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-1929332_13	1507.HMPREF0262_01186	120.0	1.02e-33	N/A	N/A
Pfam	UHGV-1929332_13	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1929332_13	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1929332_14	phrog_8300	78.3	7.9e-23	N/A	unknown function
eggNOG-mapper	UHGV-1929332_14	1507.HMPREF0262_01185	87.8	4.96e-21	N/A	N/A
structural_annotation	UHGV-1929332_14	PF06896	N/A	N/A	N/A	N/A
PHROG	UHGV-1929332_15	phrog_820	147.3	4.90454e-44	major tail protein	tail
UniRef90	UHGV-1929332_15	UniRef90_UPI001C1178BB	204.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-1929332_15	1507.HMPREF0262_01184	224.0	0	domain, Protein	N/A
COG	UHGV-1929332_15	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1929332_15	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1929332_16	phrog_2595	70.0	3.3e-20	head-tail connector protein	connector
UniRef90	UHGV-1929332_16	UniRef90_UPI000A26871F	127.0	3.13e-35	minor capsid protein	N/A
eggNOG-mapper	UHGV-1929332_16	1507.HMPREF0262_01183	97.8	2.33e-24	N/A	N/A
Pfam	UHGV-1929332_16	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-1929332_16	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-1929332_17	phrog_556	48.1	0.00000000000018	minor head protein	head and packaging
eggNOG-mapper	UHGV-1929332_17	1507.HMPREF0262_01182	125.0	1.28e-35	N/A	N/A
PHROG	UHGV-1929332_18	phrog_8710	126.0	1.4e-37	N/A	unknown function
eggNOG-mapper	UHGV-1929332_18	1507.HMPREF0262_01181	130.0	5.19e-38	N/A	N/A
structural_annotation	UHGV-1929332_18	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1929332_19	phrog_541	72.1	7.4e-21	head-tail adaptor	connector
eggNOG-mapper	UHGV-1929332_19	1507.HMPREF0262_01180	90.9	7.17e-22	N/A	N/A
UniRef90	UHGV-1929332_21	UniRef90_A0A644YJM4	320.0	0	S-l_SbsC_C domain-containing protein	N/A
structural_annotation	UHGV-1929332_21	PF11651,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1929332_22	phrog_2303	44.3	0.000000000000075	head scaffolding protein	head and packaging
PHROG	UHGV-1929332_25	phrog_581	282.7	0	minor head protein	head and packaging
UniRef90	UHGV-1929332_25	UniRef90_A0A1C6HBH6	1143.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-1929332_25	1507.HMPREF0262_01176	414.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1929332_25	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1929332_25	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1929332_25	PF06152,TIGR01641	N/A	N/A	N/A	N/A
PHROG	UHGV-1929332_26	phrog_533	252.9	0	portal protein	head and packaging
UniRef90	UHGV-1929332_26	UniRef90_A0A1C6HAQ3	979.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-1929332_26	1507.HMPREF0262_01175	462.0	0	N/A	N/A
structural_annotation	UHGV-1929332_26	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-1929332_27	K06909	140.8	1.40004e-41	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1929332_27	phrog_10250	186.6	0	N/A	unknown function
UniRef90	UHGV-1929332_27	UniRef90_R6NBU9	817.0	0	Phage terminase large subunit PBSX family	N/A
eggNOG-mapper	UHGV-1929332_27	1226322.HMPREF1545_00043	476.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-1929332_27	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-1929332_27	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1929332_27	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1929332_27	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-1929332_28	K07474	160.7	0	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1929332_28	phrog_51	155.1	0	terminase small subunit	head and packaging
UniRef90	UHGV-1929332_28	UniRef90_R6N1B1	323.0	0	Phage Terminase Small Subunit	N/A
eggNOG-mapper	UHGV-1929332_28	1499683.CCFF01000014_gene3916	157.0	0	Terminase small subunit	N/A
Pfam	UHGV-1929332_28	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1929332_28	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1929332_28	PF03592,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-1929332_29	phrog_36	46.6	0.00000000000063	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-1929332_29	428125.CLOLEP_01806	263.0	0	N/A	N/A
structural_annotation	UHGV-1929332_29	PF07374,TIGR01636	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1929332	Yes	24,469	47	75	1