vOTU vOTU-109145

vOTU: vOTU-109145

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-109145
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00005 → vOTU-109145
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → ER4
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0027086
Biosample ID	N/A
Genome length (bp)	32,987 bps
CheckV completeness	78.84% (Medium-quality)
CDS count	62
CDS density	91.29%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → ER4	Total connections	244	Host agreement	73.77
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 78.84)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0027086_1	phrog_190	69.0	7e-20	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0027086_1	UniRef90_UPI0018996508	64.7	0.00000000000402	N/A	N/A
eggNOG-mapper	UHGV-0027086_1	1226322.HMPREF1545_00295	57.4	0.00000000475	N/A	N/A
Pfam	UHGV-0027086_1	PF06356	N/A	N/A	N/A	DUF1064
KOfam	UHGV-0027086_2	K02315	173.4	0	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-0027086_2	phrog_50	153.7	1.4013e-45	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0027086_2	UniRef90_UPI00137A9A0F	286.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-0027086_2	203119.Cthe_2467	258.0	0	IstB-like ATP binding protein	N/A
Pfam	UHGV-0027086_2	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
NCBIFam	UHGV-0027086_2	NF005992.0	N/A	N/A	hypothetical protein	N/A
COG	UHGV-0027086_2	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-0027086_2	PF01695,MF_00377,NF005992,COG1484	N/A	N/A	N/A	N/A
PHROG	UHGV-0027086_3	phrog_15768	112.8	1.3e-34	N/A	unknown function
UniRef90	UHGV-0027086_3	UniRef90_UPI001959E913	129.0	4.4e-34	N/A	N/A
eggNOG-mapper	UHGV-0027086_3	203119.Cthe_2466	101.0	9.93e-23	N/A	N/A
AcrCatalog	UHGV-0027086_3	cluster_38323	82.8	2.76e-21	NA	N/A
Pfam	UHGV-0027086_3	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-0027086_3	PF19808	N/A	N/A	N/A	N/A
KOfam	UHGV-0027086_4	K03111	136.1	3.9e-40	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0027086_4	phrog_44	138.9	3.20001e-41	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0027086_4	UniRef90_R5SNS5	187.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0027086_4	1519439.JPJG01000082_gene432	185.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-0027086_4	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0027086_4	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0027086_4	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0027086_4	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0027086_4	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0027086_6	phrog_7566	85.3	4.9e-25	N/A	unknown function
UniRef90	UHGV-0027086_6	UniRef90_A0A3A5TWB4	57.4	0.0000000124	Phosphoenolpyruvate carboxykinase	N/A
PHROG	UHGV-0027086_7	phrog_72	67.0	2.1e-19	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0027086_7	UniRef90_UPI000C7BF263	172.0	0	recombination protein NinB	N/A
eggNOG-mapper	UHGV-0027086_7	445972.ANACOL_01825	135.0	7.18e-38	N/A	N/A
structural_annotation	UHGV-0027086_7	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-0027086_8	phrog_155	154.6	0	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0027086_8	UniRef90_UPI001C126E67	198.0	0	ERF family protein	N/A
eggNOG-mapper	UHGV-0027086_8	748224.HMPREF9436_03360	188.0	0	ERF superfamily	N/A
Pfam	UHGV-0027086_8	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-0027086_8	PF04404,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0027086_11	phrog_22529	98.2	4.7e-29	N/A	unknown function
UniRef90	UHGV-0027086_11	UniRef90_A0A352RPR8	144.0	8.41003e-41	3D domain-containing protein	N/A
eggNOG-mapper	UHGV-0027086_11	1304866.K413DRAFT_1950	110.0	1.4e-27	3D domain protein	N/A
Pfam	UHGV-0027086_11	PF06725	N/A	N/A	3D domain	3D
COG	UHGV-0027086_11	COG3584	N/A	N/A	3D (Asp-Asp-Asp) domain, usually in lytic transglycosylases	N/A
structural_annotation	UHGV-0027086_11	PF06725,MF_02071,NF040670,COG3584	N/A	N/A	N/A	N/A
UniRef90	UHGV-0027086_14	UniRef90_A0A810QCI5	72.8	0.00000000000000133	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0027086_14	1514668.JOOA01000002_gene1643	55.5	0.0000000333	N/A	N/A
Pfam	UHGV-0027086_14	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-0027086_14	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0027086_14	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
COG	UHGV-0027086_15	COG2932	N/A	N/A	Phage repressor protein C, contains Cro/C1-type HTH and peptisase s24 domains	N/A
structural_annotation	UHGV-0027086_15	PF01381,NF007257,COG1396	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0027086_16	PF03885	N/A	N/A	N/A	N/A
PHROG	UHGV-0027086_19	phrog_301	44.9	0.0000000000021	secreted protein	other
eggNOG-mapper	UHGV-0027086_19	1262449.CP6013_2082	176.0	0	N/A	N/A
structural_annotation	UHGV-0027086_19	PF11631,TIGR03066	N/A	N/A	N/A	N/A
UniRef90	UHGV-0027086_20	UniRef90_A0A810PZB1	70.9	0.000000000002	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0027086_20	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0027086_20	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0027086_20	PF01381,MF_02017,TIGR03070,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0027086_21	K14059	199.7	0	int; integrase	N/A
PHROG	UHGV-0027086_21	phrog_1	178.7	0	integrase	integration and excision
UniRef90	UHGV-0027086_21	UniRef90_UPI001EDE32BF	492.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-0027086_21	1226322.HMPREF1545_00144	318.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0027086_21	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0027086_21	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0027086_21	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0027086_22	1232443.BAIA02000078_gene6	59.3	0.000000000824	N/A	N/A
PHROG	UHGV-0027086_23	phrog_28802	41.0	0.0000000000056	N/A	unknown function
PHROG	UHGV-0027086_24	phrog_20016	191.6	0	N/A	unknown function
UniRef90	UHGV-0027086_24	UniRef90_A0A285PT46	201.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0027086_24	1226322.HMPREF1545_00077	169.0	0	N/A	N/A
structural_annotation	UHGV-0027086_24	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0027086_26	phrog_16490	141.0	1.49939e-42	N/A	unknown function
eggNOG-mapper	UHGV-0027086_26	1408437.JNJN01000043_gene803	149.0	9.37048e-42	N/A	N/A
PHROG	UHGV-0027086_27	phrog_22984	69.8	3.5e-20	N/A	unknown function
PHROG	UHGV-0027086_28	phrog_21718	110.1	1.7e-32	N/A	unknown function
eggNOG-mapper	UHGV-0027086_28	476272.RUMHYD_01768	66.6	0.000000000007	N/A	N/A
PHROG	UHGV-0027086_29	phrog_3754	112.7	2.7e-33	N/A	unknown function
eggNOG-mapper	UHGV-0027086_29	1226322.HMPREF1545_00073	166.0	0	N/A	N/A
UniRef90	UHGV-0027086_32	UniRef90_A0A096AZ46	128.0	3.41e-35	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0027086_32	742738.HMPREF9460_04059	128.0	5.72e-36	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0027086_32	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0027086_32	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0027086_32	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0027086_33	phrog_374	78.3	2.70002e-41	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0027086_33	UniRef90_A0A351TR50	105.0	1.17e-23	Transcriptional regulator	N/A
eggNOG-mapper	UHGV-0027086_33	478749.BRYFOR_06178	112.0	4.17e-27	AP2 domain protein	N/A
structural_annotation	UHGV-0027086_33	PF17375	N/A	N/A	N/A	N/A
KOfam	UHGV-0027086_34	K17733	84.2	1.6e-24	cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]	N/A
PHROG	UHGV-0027086_34	phrog_6523	67.7	1.8e-19	endolysin	lysis
UniRef90	UHGV-0027086_34	UniRef90_A0A316L774	201.0	0	SLH domain-containing protein	N/A
eggNOG-mapper	UHGV-0027086_34	1519439.JPJG01000023_gene536	199.0	0	D-alanyl-D-alanine carboxypeptidase	N/A
Pfam	UHGV-0027086_34	PF13539	N/A	N/A	D-alanyl-D-alanine carboxypeptidase	Peptidase_M15_4
COG	UHGV-0027086_34	COG1876	N/A	N/A	LD-carboxypeptidase LdcB, LAS superfamily	N/A
structural_annotation	UHGV-0027086_34	PF02557,MF_01924,NF000380,COG1876	N/A	N/A	N/A	N/A
PHROG	UHGV-0027086_35	phrog_13256	61.6	8.9e-18	N/A	unknown function
eggNOG-mapper	UHGV-0027086_35	1519439.JPJG01000060_gene1898	110.0	1.8e-31	N/A	N/A
PHROG	UHGV-0027086_37	phrog_937	45.9	0.000000000001	hemolysin	other
eggNOG-mapper	UHGV-0027086_37	1519439.JPJG01000023_gene533	94.7	4.33e-24	N/A	N/A
eggNOG-mapper	UHGV-0027086_39	1519439.JPJG01000060_gene1895	139.0	4.21e-39	N/A	N/A
structural_annotation	UHGV-0027086_39	PF10618	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0027086_42	1235797.C816_04177	98.6	1.88e-18	alginic acid biosynthetic process	N/A
COG	UHGV-0027086_42	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0027086_44	PF20942,NF041894,COG5456	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0027086_45	1235797.C816_04179	209.0	0	Chaperone of endosialidase	N/A
structural_annotation	UHGV-0027086_45	PF14594	N/A	N/A	N/A	N/A
PHROG	UHGV-0027086_46	phrog_32308	48.2	0.000000000000022	N/A	unknown function
UniRef90	UHGV-0027086_46	UniRef90_A0A2Z4QA17	267.0	0	KID repeat-containing protein	N/A
eggNOG-mapper	UHGV-0027086_46	1235797.C816_04180	320.0	0	N/A	N/A
structural_annotation	UHGV-0027086_46	PF21683,TIGR02126,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0027086_47	phrog_1194	85.9	3.7e-25	N/A	unknown function
eggNOG-mapper	UHGV-0027086_47	1232443.BAIA02000078_gene17	122.0	1.93e-34	N/A	N/A
Pfam	UHGV-0027086_47	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0027086_47	PF20458,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0027086_48	phrog_1535	86.3	0	tail length tape measure protein	tail
UniRef90	UHGV-0027086_48	UniRef90_A0A810PX76	150.0	1.96e-34	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0027086_48	1235797.C816_04182	279.0	0	SLT domain	N/A
COG	UHGV-0027086_48	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0027086_48	PF05546,TIGR02559	N/A	N/A	N/A	N/A
PHROG	UHGV-0027086_49	phrog_806	74.5	1.2e-21	N/A	unknown function
UniRef90	UHGV-0027086_49	UniRef90_UPI00137B5163	201.0	0	N/A	N/A
eggNOG-mapper	UHGV-0027086_49	397290.C810_05150	144.0	8.38999e-41	N/A	N/A
Pfam	UHGV-0027086_49	PF11611	N/A	N/A	N/A	DUF4352
structural_annotation	UHGV-0027086_49	PF11611,MF_00791,NF003967,COG2967	N/A	N/A	N/A	N/A
PHROG	UHGV-0027086_50	phrog_706	120.6	1.2e-35	N/A	unknown function
UniRef90	UHGV-0027086_50	UniRef90_UPI000682A80B	252.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0027086_50	693746.OBV_18170	241.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0027086_50	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0027086_50	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0027086_51	phrog_11299	88.9	6.2e-26	N/A	unknown function
eggNOG-mapper	UHGV-0027086_51	693746.OBV_18160	102.0	3.96e-26	N/A	N/A
structural_annotation	UHGV-0027086_51	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0027086_52	phrog_3099	93.0	3.2e-27	N/A	unknown function
eggNOG-mapper	UHGV-0027086_52	1232443.BAIA02000078_gene23	194.0	0	N/A	N/A
structural_annotation	UHGV-0027086_52	TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-0027086_53	phrog_3266	46.3	0.00000000000064	tail completion	connector
eggNOG-mapper	UHGV-0027086_53	1232443.BAIA02000078_gene24	154.0	0	N/A	N/A
structural_annotation	UHGV-0027086_53	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0027086_54	phrog_556	73.5	2.1e-21	minor head protein	head and packaging
UniRef90	UHGV-0027086_54	UniRef90_UPI00195E1497	173.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0027086_54	1226322.HMPREF1545_00054	139.0	1.97e-40	Minor capsid protein	N/A
Pfam	UHGV-0027086_54	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0027086_54	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0027086_55	phrog_3366	89.8	2.9e-26	N/A	unknown function
eggNOG-mapper	UHGV-0027086_55	1226322.HMPREF1545_00053	140.0	5.90998e-41	N/A	N/A
structural_annotation	UHGV-0027086_55	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-0027086_56	phrog_541	111.7	4e-33	head-tail adaptor	connector
eggNOG-mapper	UHGV-0027086_56	411470.RUMGNA_02220	56.6	0.0000000282	N/A	N/A
PHROG	UHGV-0027086_57	phrog_544	180.9	0	major head protein	head and packaging
UniRef90	UHGV-0027086_57	UniRef90_A0A810PZM2	712.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0027086_57	1347392.CCEZ01000005_gene1236	279.0	0	N/A	N/A
Pfam	UHGV-0027086_57	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
structural_annotation	UHGV-0027086_57	PF03864,PF18316,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-0027086_58	UniRef90_A0A6B9SU02	64.3	0.00000000309	Fibronectin autolysin	N/A
structural_annotation	UHGV-0027086_58	PF06810	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0027086_59	PF18152	N/A	N/A	N/A	N/A
PHROG	UHGV-0027086_60	phrog_581	285.1	0	minor head protein	head and packaging
UniRef90	UHGV-0027086_60	UniRef90_UPI001D080D49	565.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0027086_60	1226322.HMPREF1545_00046	385.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0027086_60	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0027086_60	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0027086_60	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0027086_61	phrog_8680	226.0	0	N/A	unknown function
UniRef90	UHGV-0027086_61	UniRef90_A0A3R6D7I3	263.0	0	N/A	N/A
eggNOG-mapper	UHGV-0027086_61	411470.RUMGNA_02208	244.0	0	N/A	N/A
Pfam	UHGV-0027086_61	PF14386	N/A	N/A	N/A	DUF4417
structural_annotation	UHGV-0027086_61	PF14386	N/A	N/A	N/A	N/A
PHROG	UHGV-0027086_62	phrog_9479	117.8	9e-35	N/A	unknown function
structural_annotation	UHGV-0027086_62	PF15529	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0027086	Yes	32,987	53	79	1