vOTU vOTU-109384

vOTU: vOTU-109384

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-109384
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00007 → vGENUS-15774 → vOTU-109384
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0020376
Biosample ID	SAMEA4765911
Genome length (bp)	29,402 bps
CheckV completeness	51.04% (Medium-quality)
CDS count	39
CDS density	87.28%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium	Total connections	353	Host agreement	98.58
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 51.04)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0020376_1	phrog_64	150.5	8.40779e-45	portal protein	head and packaging
UniRef90	UHGV-0020376_1	UniRef90_A0A371ILT4	328.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0020376_1	1121866.AUGK01000003_gene1429	275.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0020376_1	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0020376_1	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0020376_4	phrog_29	201.3	0	major head protein	head and packaging
UniRef90	UHGV-0020376_4	UniRef90_A0A2Z4QBB4	371.0	0	Major capsid protein E	N/A
eggNOG-mapper	UHGV-0020376_4	1347368.HG964404_gene4993	255.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-0020376_4	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-0020376_4	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-0020376_5	UniRef90_R6N215	82.4	3.72e-18	Phage QLRG family putative DNA packaging	N/A
structural_annotation	UHGV-0020376_5	TIGR01560	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0020376_6	PF19586,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0020376_7	397290.C810_01411	56.6	0.000000154	N/A	N/A
structural_annotation	UHGV-0020376_8	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-0020376_9	phrog_158	43.8	0.000000000004	major tail protein	tail
UniRef90	UHGV-0020376_9	UniRef90_UPI001D06C8CA	85.1	2.15e-18	phage tail protein	N/A
eggNOG-mapper	UHGV-0020376_9	1449343.JQLQ01000002_gene1514	57.4	0.0000000278	Phage tail tube protein, TTP	N/A
structural_annotation	UHGV-0020376_9	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0020376_10	1123263.AUKY01000015_gene1618	57.8	0.00000000304	N/A	N/A
Pfam	UHGV-0020376_10	PF16478	N/A	N/A	N/A	DUF5055
structural_annotation	UHGV-0020376_10	PF16478	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0020376_11	1121333.JMLH01000047_gene1011	72.0	0.0000000000000188	N/A	N/A
PHROG	UHGV-0020376_12	phrog_1535	134.4	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0020376_12	1121866.AUGK01000003_gene1437	244.0	0	phage tail tape measure protein	N/A
COG	UHGV-0020376_12	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
PHROG	UHGV-0020376_13	phrog_1194	106.8	1.1e-31	N/A	unknown function
eggNOG-mapper	UHGV-0020376_13	1121866.AUGK01000003_gene1438	99.0	4.96e-25	N/A	N/A
Pfam	UHGV-0020376_13	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0020376_13	PF20458,TIGR02126,COG4718	N/A	N/A	N/A	N/A
PHROG	UHGV-0020376_14	phrog_6616	205.1	0	tail protein	tail
eggNOG-mapper	UHGV-0020376_14	445971.ANASTE_00088	120.0	2.3e-25	N/A	N/A
structural_annotation	UHGV-0020376_14	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0020376_15	PF11192	N/A	N/A	N/A	N/A
PHROG	UHGV-0020376_16	phrog_7158	51.2	3.9e-16	N/A	unknown function
eggNOG-mapper	UHGV-0020376_16	411901.BACCAC_01116	114.0	1.52e-23	Calcineurin-like phosphoesterase	N/A
Pfam	UHGV-0020376_16	PF00149	N/A	N/A	Calcineurin-like phosphoesterase	Metallophos
KOfam	UHGV-0020376_17	K07273	174.5	0	acm; lysozyme	N/A
PHROG	UHGV-0020376_17	phrog_291	137.7	9.60002e-41	endolysin	lysis
UniRef90	UHGV-0020376_17	UniRef90_UPI001D0EE7D8	255.0	0	glycoside hydrolase family 25 protein	N/A
eggNOG-mapper	UHGV-0020376_17	748224.HMPREF9436_00154	238.0	0	hydrolase, family 25	N/A
Pfam	UHGV-0020376_17	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0020376_17	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0020376_17	PF01183,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-0020376_18	phrog_4105	100.7	8.9e-30	N/A	unknown function
eggNOG-mapper	UHGV-0020376_18	657322.FPR_27220	137.0	6.79994e-41	N/A	N/A
PHROG	UHGV-0020376_19	phrog_15303	83.9	1.4e-24	N/A	unknown function
PHROG	UHGV-0020376_22	phrog_16490	103.4	7.1e-39	N/A	unknown function
eggNOG-mapper	UHGV-0020376_22	1408437.JNJN01000043_gene803	159.0	4.2039e-45	N/A	N/A
eggNOG-mapper	UHGV-0020376_23	1408437.JNJN01000043_gene802	117.0	2.11e-32	N/A	N/A
eggNOG-mapper	UHGV-0020376_24	1378168.N510_03079	95.1	6.4e-21	N/A	N/A
eggNOG-mapper	UHGV-0020376_26	1415774.U728_1699	109.0	9.08e-29	N/A	N/A
PHROG	UHGV-0020376_28	phrog_990	52.5	0.0000000000000071	metal-dependent phosphohydrolase	other
eggNOG-mapper	UHGV-0020376_28	397291.C804_00986	99.0	1.4e-24	N/A	N/A
Pfam	UHGV-0020376_28	PF01966	N/A	N/A	HD domain	HD
structural_annotation	UHGV-0020376_28	PF13328	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0020376_30	MF_00273	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0020376_31	PF07878	N/A	N/A	N/A	N/A
Pfam	UHGV-0020376_32	PF04448	N/A	N/A	N/A	DUF551
KOfam	UHGV-0020376_33	K03496	234.2	0	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-0020376_33	phrog_164	164.1	0	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0020376_33	UniRef90_A0A1G6FF50	205.0	0	Chromosome partitioning protein	N/A
eggNOG-mapper	UHGV-0020376_33	1408423.JHYA01000021_gene392	189.0	0	Cellulose biosynthesis protein BcsQ	N/A
Pfam	UHGV-0020376_33	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-0020376_33	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-0020376_33	PF13614,MF_00533,NF010443,COG1192	N/A	N/A	N/A	N/A
PHROG	UHGV-0020376_35	phrog_4402	99.4	3e-29	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0020376_35	UniRef90_A0A0H5Q331	295.0	0	Rep_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0020376_35	999413.HMPREF1094_04438	125.0	5.08e-30	Initiator Replication protein	N/A
Pfam	UHGV-0020376_35	PF01051	N/A	N/A	Initiator Replication protein, WH1	Rep3_N
Pfam	UHGV-0020376_35	PF21205	N/A	N/A	Initiator Rep protein, WH2	Rep3_C
COG	UHGV-0020376_35	COG5527	N/A	N/A	Protein involved in initiation of plasmid replication	N/A
structural_annotation	UHGV-0020376_35	PF01051,PF21205,NF038290,COG5527	N/A	N/A	N/A	N/A
UniRef90	UHGV-0020376_36	UniRef90_A0A2A7AM70	184.0	0	HTH cro/C1-type domain-containing protein	N/A
structural_annotation	UHGV-0020376_36	PF13560,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0020376	Yes	29,402	48	51	1