vOTU vOTU-109853

vOTU: vOTU-109853

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-109853
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes → Bacilli → Lactobacillales → Enterococcaceae → Enterococcus_B → Enterococcus_B faecium
Taxonomy (UHGV)	vFAM-00011 → vSUBFAM-01216 → vGENUS-09044 → vOTU-109853
Host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Enterococcaceae → Enterococcus_B → Enterococcus_B faecium
Host range breadth	Species
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0132256
Biosample ID	SAMN02676203
Genome length (bp)	22,821 bps
CheckV completeness	53.68% (Medium-quality)
CDS count	31
CDS density	93.49%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Enterococcaceae → Enterococcus_B	Total connections	2	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Enterococcaceae → Enterococcus_B → Enterococcus_B faecium	Total connections	850	Host agreement	82.71

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 53.68)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0132256_1	K01447	90.4	2.9e-26	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0132256_1	phrog_2338	305.6	0	endolysin	lysis
UniRef90	UHGV-0132256_1	UniRef90_A0A377MS14	664.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0132256_1	1104325.M7W_2034	685.0	0	Ami_2	N/A
Pfam	UHGV-0132256_1	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0132256_1	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-0132256_1	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-0132256_2	phrog_881	117.2	4.5e-35	holin	lysis
UniRef90	UHGV-0132256_2	UniRef90_C9AN11	126.0	7.95e-37	Holin	N/A
eggNOG-mapper	UHGV-0132256_2	768486.EHR_09645	119.0	7.88e-35	Putative phage holin Dp-1	N/A
Pfam	UHGV-0132256_2	PF16938	N/A	N/A	Putative phage holin Dp-1	Phage_holin_Dp1
structural_annotation	UHGV-0132256_2	PF16938,COG3237	N/A	N/A	N/A	N/A
PHROG	UHGV-0132256_3	phrog_1009	92.9	2.2e-27	N/A	unknown function
eggNOG-mapper	UHGV-0132256_3	565664.EFXG_03971	100.0	1.97e-26	N/A	N/A
PHROG	UHGV-0132256_4	phrog_134	48.8	0.00000000000011	N/A	unknown function
UniRef90	UHGV-0132256_4	UniRef90_A0A0M2B3U8	95.9	2.39e-25	XkdX family protein	N/A
eggNOG-mapper	UHGV-0132256_4	565664.EFXG_01755	93.2	4.69e-25	Phage uncharacterised protein (Phage_XkdX)	N/A
Pfam	UHGV-0132256_4	PF09693	N/A	N/A	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
NCBIFam	UHGV-0132256_4	TIGR01669.1	N/A	N/A	XkdX family protein	N/A
structural_annotation	UHGV-0132256_4	PF09693,TIGR01669	N/A	N/A	N/A	N/A
PHROG	UHGV-0132256_5	phrog_1536	132.8	2.20004e-41	N/A	unknown function
eggNOG-mapper	UHGV-0132256_5	1158607.UAU_01048	159.0	0	N/A	N/A
PHROG	UHGV-0132256_6	phrog_7911	126.2	1.8e-37	tail protein	tail
UniRef90	UHGV-0132256_6	UniRef90_C9BVF1	97.1	2.77e-22	Predicted protein	N/A
eggNOG-mapper	UHGV-0132256_6	1201292.DR75_1497	298.0	0	N/A	N/A
PHROG	UHGV-0132256_7	phrog_6907	148.0	1.26117e-44	N/A	unknown function
UniRef90	UHGV-0132256_7	UniRef90_UPI001A8F63C0	97.8	2.64e-23	collagen-like protein	N/A
eggNOG-mapper	UHGV-0132256_7	1158607.UAU_01046	114.0	7.49e-31	N/A	N/A
PHROG	UHGV-0132256_8	phrog_9625	299.5	0	N/A	unknown function
eggNOG-mapper	UHGV-0132256_8	1158607.UAU_01045	328.0	0	N/A	N/A
PHROG	UHGV-0132256_9	phrog_6042	403.1	0	minor head protein	head and packaging
UniRef90	UHGV-0132256_9	UniRef90_A0A829A9K1	516.0	0	BppU_N domain-containing protein	N/A
eggNOG-mapper	UHGV-0132256_9	1158607.UAU_01044	379.0	0	N/A	N/A
Pfam	UHGV-0132256_9	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
structural_annotation	UHGV-0132256_9	PF10651,NF040788	N/A	N/A	N/A	N/A
PHROG	UHGV-0132256_10	phrog_11857	305.7	0	N/A	unknown function
UniRef90	UHGV-0132256_10	UniRef90_A0A829A5N4	353.0	0	Peptidase C51 domain-containing protein	N/A
eggNOG-mapper	UHGV-0132256_10	1158607.UAU_01043	236.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0132256_10	PF05257	N/A	N/A	CHAP domain	CHAP
COG	UHGV-0132256_10	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0132256_10	COG3942	N/A	N/A	N/A	N/A
PHROG	UHGV-0132256_11	phrog_1067	668.3	0	minor head protein	head and packaging
UniRef90	UHGV-0132256_11	UniRef90_A0A132YYC6	1326.0	0	CHAP domain-containing protein	N/A
eggNOG-mapper	UHGV-0132256_11	1158614.I592_02324	1271.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-0132256_11	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
Pfam	UHGV-0132256_11	PF18013	N/A	N/A	Phage tail lysozyme	Phage_lysozyme2
Pfam	UHGV-0132256_11	PF05382	N/A	N/A	Bacteriophage peptidoglycan hydrolase	Amidase_5
NCBIFam	UHGV-0132256_11	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0132256_11	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0132256_11	PF14594,PF01551,PF18013,TIGR01665,NF040883,COG4926,COG0739	N/A	N/A	N/A	N/A
PHROG	UHGV-0132256_12	phrog_33	76.7	5.5e-22	distal tail protein Dit	tail
UniRef90	UHGV-0132256_12	UniRef90_A0A377L438	500.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0132256_12	1158604.I591_00537	414.0	0	phage tail	N/A
COG	UHGV-0132256_12	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0132256_12	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0132256_13	phrog_991	241.6	0	tail length tape measure protein	tail
UniRef90	UHGV-0132256_13	UniRef90_A0A1A6Z382	1271.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0132256_13	1158604.I591_00536	1027.0	0	Phage-related minor tail protein	N/A
Pfam	UHGV-0132256_13	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0132256_13	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0132256_13	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-0132256_13	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0132256_14	phrog_4888	192.9	0	tail assembly chaperone	tail
UniRef90	UHGV-0132256_14	UniRef90_W7D9N8	97.8	2.03e-23	N/A	N/A
eggNOG-mapper	UHGV-0132256_14	1158604.I591_00535	265.0	0	N/A	N/A
structural_annotation	UHGV-0132256_14	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-0132256_15	phrog_11502	153.1	1.4013e-45	tail protein	tail
UniRef90	UHGV-0132256_15	UniRef90_A0A377KN14	420.0	0	Phi13 family phage major tail protein	N/A
eggNOG-mapper	UHGV-0132256_15	1158604.I591_00534	387.0	0	N/A	N/A
NCBIFam	UHGV-0132256_15	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0132256_15	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0132256_16	phrog_5	54.9	0.0000000000000027	tail completion or Neck1 protein	connector
UniRef90	UHGV-0132256_16	UniRef90_A0A132YZK7	218.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0132256_16	565664.EFXG_02655	204.0	0	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0132256_16	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-0132256_16	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0132256_16	TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0132256_17	phrog_78	46.4	0.00000000000082	tail terminator	connector
UniRef90	UHGV-0132256_17	UniRef90_A0A366U5N9	176.0	0	N/A	N/A
eggNOG-mapper	UHGV-0132256_17	565664.EFXG_02656	224.0	0	N/A	N/A
structural_annotation	UHGV-0132256_17	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-0132256_18	phrog_4014	159.7	0	head-tail adaptor	connector
UniRef90	UHGV-0132256_18	UniRef90_A0A2K8TFW3	201.0	0	Phage head-tail joining protein	N/A
eggNOG-mapper	UHGV-0132256_18	565664.EFXG_02657	209.0	0	Phage head-tail joining protein	N/A
Pfam	UHGV-0132256_18	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-0132256_18	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
structural_annotation	UHGV-0132256_18	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0132256_19	phrog_4609	150.5	2.8026e-45	N/A	unknown function
UniRef90	UHGV-0132256_19	UniRef90_A0A1S8KT60	181.0	0	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-0132256_19	565664.EFXG_02658	179.0	0	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-0132256_19	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
NCBIFam	UHGV-0132256_19	TIGR01560.2	N/A	N/A	head-tail connector protein	N/A
PHROG	UHGV-0132256_20	phrog_10	189.2	0	major head protein	head and packaging
UniRef90	UHGV-0132256_20	UniRef90_A0A1V8YHE1	716.0	0	Major capsid protein	N/A
eggNOG-mapper	UHGV-0132256_20	1158604.I591_00529	718.0	0	Phage capsid family	N/A
Pfam	UHGV-0132256_20	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0132256_20	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0132256_20	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0132256_20	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0132256_21	K06904	187.6	0	N/A	N/A
PHROG	UHGV-0132256_21	phrog_80	201.7	0	head maturation protease	head and packaging
UniRef90	UHGV-0132256_21	UniRef90_A0A829A6G8	333.0	0	HK97 family phage prohead protease	N/A
eggNOG-mapper	UHGV-0132256_21	1158604.I591_00528	333.0	0	Caudovirus prohead serine protease	N/A
Pfam	UHGV-0132256_21	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-0132256_21	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-0132256_21	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0132256_21	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0132256_22	phrog_12	117.2	1.2e-34	portal protein	head and packaging
UniRef90	UHGV-0132256_22	UniRef90_A0A377KN49	787.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0132256_22	565664.EFXG_02661	794.0	0	Phage portal protein	N/A
Pfam	UHGV-0132256_22	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-0132256_22	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0132256_22	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0132256_23	phrog_9	331.6	0	terminase large subunit	head and packaging
UniRef90	UHGV-0132256_23	UniRef90_UPI0018CBB24D	1129.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-0132256_23	565664.EFXG_02662	1130.0	0	Phage Terminase	N/A
Pfam	UHGV-0132256_23	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0132256_23	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0132256_23	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0132256_23	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0132256_24	phrog_361	160.9	0	terminase small subunit	head and packaging
UniRef90	UHGV-0132256_24	UniRef90_A0A2K8TFV2	272.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-0132256_24	565664.EFXG_02663	278.0	0	N/A	N/A
Pfam	UHGV-0132256_24	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
KOfam	UHGV-0132256_25	K07451	52.1	0.000000000000013	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-0132256_25	phrog_144	98.7	5.6e-29	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0132256_25	UniRef90_A0A2K8TFR7	264.0	0	Endonuclease	N/A
eggNOG-mapper	UHGV-0132256_25	565664.EFXG_02664	268.0	0	HNH endonuclease	N/A
Pfam	UHGV-0132256_25	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0132256_25	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0132256_25	PF05766	N/A	N/A	N/A	N/A
PHROG	UHGV-0132256_26	phrog_3281	101.9	4.1e-30	endonuclease VII	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0132256_26	UniRef90_UPI000CF30667	189.0	0	Rho termination factor N-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-0132256_26	565664.EFXG_02665	202.0	0	N/A	N/A
structural_annotation	UHGV-0132256_26	PF09124	N/A	N/A	N/A	N/A
PHROG	UHGV-0132256_27	phrog_5859	100.0	7.2e-31	N/A	unknown function
eggNOG-mapper	UHGV-0132256_27	1158604.I591_00521	147.0	9.80909e-45	N/A	N/A
structural_annotation	UHGV-0132256_27	PF03927,MF_02200,NF009840,COG3471	N/A	N/A	N/A	N/A
PHROG	UHGV-0132256_28	phrog_248	91.9	8.9e-27	transcriptional activator	transcription regulation
UniRef90	UHGV-0132256_28	UniRef90_A0A8G1S6S1	299.0	0	ArpU family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0132256_28	768486.EHR_09840	296.0	0	N/A	N/A
NCBIFam	UHGV-0132256_28	TIGR01637.1	N/A	N/A	ArpU family phage packaging/lysis transcriptional regulator	N/A
structural_annotation	UHGV-0132256_28	PF04545,TIGR01637,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-0132256_29	phrog_248	76.2	6.4e-22	transcriptional activator	transcription regulation
UniRef90	UHGV-0132256_29	UniRef90_A0A132PAL7	278.0	0	Transcriptional regulator	N/A
eggNOG-mapper	UHGV-0132256_29	768486.EHR_00690	110.0	4.24e-29	N/A	N/A
NCBIFam	UHGV-0132256_29	TIGR01637.1	N/A	N/A	ArpU family phage packaging/lysis transcriptional regulator	N/A
structural_annotation	UHGV-0132256_29	PF05263,MF_00674,TIGR01637,COG1191	N/A	N/A	N/A	N/A
PHROG	UHGV-0132256_30	phrog_3302	183.8	0	N/A	unknown function
UniRef90	UHGV-0132256_30	UniRef90_C9AMY2	194.0	0	ArpT	N/A
eggNOG-mapper	UHGV-0132256_30	1140001.I571_01143	192.0	0	N/A	N/A
structural_annotation	UHGV-0132256_30	PF09953,MF_00906,NF000331,COG4873	N/A	N/A	N/A	N/A
PHROG	UHGV-0132256_31	phrog_98	80.7	1.8e-23	N/A	unknown function
UniRef90	UHGV-0132256_31	UniRef90_UPI00190E6393	177.0	0	YopX family protein	N/A
eggNOG-mapper	UHGV-0132256_31	565664.EFXG_03977	171.0	0	YopX protein	N/A
Pfam	UHGV-0132256_31	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-0132256_31	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0132256	Yes	22,821	38	54	1