vOTU vOTU-110072

vOTU: vOTU-110072

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-110072
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00124 → vGENUS-01155 → vOTU-110072
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium
Host range breadth	Genus
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0131600
Biosample ID	SAMN03283285
Genome length (bp)	23,600 bps
CheckV completeness	58.49% (Medium-quality)
CDS count	33
CDS density	96.25%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium	Total connections	523	Host agreement	99.62
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae	Total connections	4	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 58.49)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0131600_1	phrog_13845	60.9	1.7e-17	N/A	unknown function
eggNOG-mapper	UHGV-0131600_1	1399942.U3PDR2_9CAUD	69.3	0.000000000000143	N/A	N/A
Pfam	UHGV-0131600_1	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
structural_annotation	UHGV-0131600_1	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0131600_2	phrog_9	235.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-0131600_2	UniRef90_A0A2A7ALT4	1030.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0131600_2	610130.Closa_0741	624.0	0	Phage Terminase	N/A
Pfam	UHGV-0131600_2	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0131600_2	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0131600_2	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0131600_3	phrog_12	134.1	8.9e-40	portal protein	head and packaging
UniRef90	UHGV-0131600_3	UniRef90_A0A2A7B6S8	564.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0131600_3	349161.Dred_2606	286.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0131600_3	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0131600_3	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0131600_3	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0131600_3	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0131600_4	K01358	88.8	8.4e-26	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0131600_4	phrog_94	139.9	2.79993e-41	head maturation protease	head and packaging
UniRef90	UHGV-0131600_4	UniRef90_UPI001C10F40E	159.0	1.68156e-44	Clp protease ClpP	N/A
eggNOG-mapper	UHGV-0131600_4	1232452.BAIB02000007_gene1626	148.0	2.25006e-41	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0131600_4	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0131600_4	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0131600_4	PF00574,MF_00444,TIGR00493,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0131600_5	phrog_10	138.0	9.99995e-41	major head protein	head and packaging
UniRef90	UHGV-0131600_5	UniRef90_A0A2A7B712	770.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0131600_5	1235792.C808_00086	456.0	0	Phage capsid family	N/A
Pfam	UHGV-0131600_5	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
Pfam	UHGV-0131600_5	PF12733	N/A	N/A	Cadherin-like beta sandwich domain	Cadherin-like
NCBIFam	UHGV-0131600_5	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0131600_5	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0131600_5	PF05065,PF12733,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0131600_6	phrog_749	54.0	0.0000000000000027	N/A	unknown function
eggNOG-mapper	UHGV-0131600_6	1235792.C808_00087	82.4	4.57e-19	N/A	N/A
PHROG	UHGV-0131600_7	phrog_19734	97.6	1.1e-28	N/A	unknown function
UniRef90	UHGV-0131600_7	UniRef90_A0A6I7GNS7	117.0	2.5e-31	Phage head closure protein	N/A
eggNOG-mapper	UHGV-0131600_7	349161.Dred_2602	70.9	0.0000000000000575	N/A	N/A
structural_annotation	UHGV-0131600_7	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0131600_8	999413.HMPREF1094_02005	69.3	0.0000000000000709	N/A	N/A
structural_annotation	UHGV-0131600_8	PF05657,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-0131600_9	phrog_5	48.8	0.00000000000015	tail completion or Neck1 protein	connector
UniRef90	UHGV-0131600_9	UniRef90_A0A1C6FG30	125.0	1.34e-33	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-0131600_9	908340.HMPREF9406_2573	121.0	8.65e-33	N/A	N/A
Pfam	UHGV-0131600_9	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-0131600_9	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0131600_9	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0131600_10	phrog_88	87.4	1.7e-25	major tail protein	tail
UniRef90	UHGV-0131600_10	UniRef90_A0A7U9IBX1	134.0	4.82e-36	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-0131600_10	33035.JPJF01000039_gene278	79.7	0.00000000000000105	N/A	N/A
NCBIFam	UHGV-0131600_10	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0131600_10	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0131600_11	1286171.EAL2_c05960	50.4	0.00000799	N/A	N/A
PHROG	UHGV-0131600_13	phrog_9959	101.2	6.6e-30	tail length tape measure protein	tail
UniRef90	UHGV-0131600_13	UniRef90_A0A2A7ALS3	770.0	0	TMP_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0131600_13	596328.HMPREF0578_1241	159.0	8.15e-37	phage tail tape measure protein	N/A
Pfam	UHGV-0131600_13	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0131600_13	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0131600_13	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0131600_13	PF20155,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0131600_14	phrog_33	91.6	1.5e-26	distal tail protein Dit	tail
UniRef90	UHGV-0131600_14	UniRef90_A0A1C6H6D2	129.0	4.19e-33	Phage-related protein	N/A
eggNOG-mapper	UHGV-0131600_14	439292.Bsel_2995	103.0	5.8e-24	tail component	N/A
COG	UHGV-0131600_14	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0131600_14	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0131600_15	phrog_1067	195.9	0	minor head protein	head and packaging
UniRef90	UHGV-0131600_15	UniRef90_A0A2A7AM44	493.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0131600_15	1027396.LMOSA_21510	108.0	4.55e-22	Prophage endopeptidase tail	N/A
Pfam	UHGV-0131600_15	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0131600_15	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0131600_15	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0131600_15	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
KOfam	UHGV-0131600_17	K10804	52.6	0.000000000000005	tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]	N/A
PHROG	UHGV-0131600_17	phrog_5240	66.3	3.1e-20	tail fiber protein	tail
eggNOG-mapper	UHGV-0131600_17	421052.F945_02640	61.2	0.000000918	N/A	N/A
Pfam	UHGV-0131600_17	PF13472	N/A	N/A	GDSL-like Lipase/Acylhydrolase family	Lipase_GDSL_2
KOfam	UHGV-0131600_18	K07273	167.3	0	acm; lysozyme	N/A
PHROG	UHGV-0131600_18	phrog_291	125.3	5.8e-37	endolysin	lysis
UniRef90	UHGV-0131600_18	UniRef90_A0A564U0D3	348.0	0	Autolytic lysozyme	N/A
eggNOG-mapper	UHGV-0131600_18	718252.FP2_04890	219.0	0	hydrolase, family 25	N/A
Pfam	UHGV-0131600_18	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0131600_18	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0131600_18	PF01183,TIGR04053,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-0131600_20	phrog_15303	77.9	1.1e-22	N/A	unknown function
structural_annotation	UHGV-0131600_23	PF04545,MF_00245,NF001074,COG2739	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0131600_24	1033733.CAEK01000007_gene1628	89.4	9.39e-21	N/A	N/A
structural_annotation	UHGV-0131600_24	PF03869,NF041793,COG4691	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0131600_25	742740.HMPREF9474_00056	103.0	5.34e-24	N/A	N/A
Pfam	UHGV-0131600_25	PF18912	N/A	N/A	Double zinc ribbon domain	DZR_2
PHROG	UHGV-0131600_31	phrog_16490	102.9	2.5e-38	N/A	unknown function
eggNOG-mapper	UHGV-0131600_31	1408437.JNJN01000043_gene803	158.0	1.12104e-44	N/A	N/A
eggNOG-mapper	UHGV-0131600_32	1408437.JNJN01000043_gene802	120.0	1.83e-33	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0131600	Yes	23,600	55	58	1