vOTU vOTU-110268

vOTU: vOTU-110268

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-110268
Number of genomes	1
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00007 → vSUBFAM-00438 → vGENUS-00286 → vOTU-110268
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → KLE1615 → KLE1615 sp900066985
Host range breadth	Species
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0271930
Biosample ID	SAMEA4813904
Genome length (bp)	49,246 bps
CheckV completeness	55.63% (Medium-quality)
CDS count	81
CDS density	90.95%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → KLE1615 → KLE1615 sp900066985	Total connections	69	Host agreement	73.91
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 55.63)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0271930_12	phrog_8308	281.0	0	N/A	unknown function
UniRef90	UHGV-0271930_12	UniRef90_A0A1C6BVL9	773.0	0	RNA dependent RNA polymerase	N/A
eggNOG-mapper	UHGV-0271930_12	1235800.C819_00453	278.0	0	RNA dependent RNA polymerase	N/A
Pfam	UHGV-0271930_12	PF05183	N/A	N/A	RNA dependent RNA polymerase	RdRP
structural_annotation	UHGV-0271930_12	PF05183	N/A	N/A	N/A	N/A
KOfam	UHGV-0271930_13	K13655	41.8	0.000000000023	mqsA; HTH-type transcriptional regulator / antitoxin MqsA	N/A
Pfam	UHGV-0271930_13	PF15731	N/A	N/A	Antitoxin component of bacterial toxin-antitoxin system, MqsA	MqsA_antitoxin
NCBIFam	UHGV-0271930_13	TIGR03831.1	N/A	N/A	YgiT-type zinc finger protein	N/A
COG	UHGV-0271930_13	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
structural_annotation	UHGV-0271930_13	PF15731,TIGR03831	N/A	N/A	N/A	N/A
PHROG	UHGV-0271930_19	phrog_284	182.4	0	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0271930_19	UniRef90_A0A2A7AJB4	610.0	0	Metallophos_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0271930_19	180332.JTGN01000008_gene4086	249.0	0	N/A	N/A
Pfam	UHGV-0271930_19	PF12850	N/A	N/A	Calcineurin-like phosphoesterase superfamily domain	Metallophos_2
structural_annotation	UHGV-0271930_19	PF12850,MF_00325,NF003120,COG1311	N/A	N/A	N/A	N/A
PHROG	UHGV-0271930_21	phrog_28918	70.3	5.3e-31	N/A	unknown function
eggNOG-mapper	UHGV-0271930_21	1121333.JMLH01000047_gene1009	70.5	0.00000000195	N/A	N/A
PHROG	UHGV-0271930_22	phrog_1194	73.6	2.4e-21	N/A	unknown function
eggNOG-mapper	UHGV-0271930_22	1232453.BAIF02000058_gene1638	89.4	2.39e-21	N/A	N/A
structural_annotation	UHGV-0271930_22	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0271930_23	phrog_1401	50.7	0.000000000000029	N/A	unknown function
UniRef90	UHGV-0271930_23	UniRef90_UPI001E3A7391	58.9	0.0000000129	N/A	N/A
eggNOG-mapper	UHGV-0271930_23	272562.CA_C1880	69.3	0.000000000000205	N/A	N/A
structural_annotation	UHGV-0271930_23	PF07761	N/A	N/A	N/A	N/A
PHROG	UHGV-0271930_28	phrog_17147	237.6	0	N/A	unknown function
UniRef90	UHGV-0271930_28	UniRef90_A0A374JQW7	215.0	0	N/A	N/A
eggNOG-mapper	UHGV-0271930_28	411459.RUMOBE_01720	108.0	2.15e-22	N/A	N/A
KOfam	UHGV-0271930_29	K00986	75.6	6.8e-22	ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]	N/A
PHROG	UHGV-0271930_29	phrog_1423	148.9	4.06377e-44	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0271930_29	UniRef90_A0A1C5N0E2	399.0	0	Reverse transcriptase (RNA-dependent DNA polymerase)	N/A
eggNOG-mapper	UHGV-0271930_29	478749.BRYFOR_08556	248.0	0	Reverse transcriptase (RNA-dependent DNA polymerase)	N/A
PADLOC	UHGV-0271930_29	icity0040	63.5	2e-18	RT (reverse transcriptase)	CRISPR-CAS
Pfam	UHGV-0271930_29	PF00078	N/A	N/A	Reverse transcriptase (RNA-dependent DNA polymerase)	RVT_1
COG	UHGV-0271930_29	COG3344	N/A	N/A	Retron-type reverse transcriptase	N/A
structural_annotation	UHGV-0271930_29	PF00078,MF_04065,TIGR04416,COG3344	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0271930_31	PF09693	N/A	N/A	N/A	N/A
PHROG	UHGV-0271930_32	phrog_6616	134.2	8.99999e-40	tail protein	tail
eggNOG-mapper	UHGV-0271930_32	428127.EUBDOL_01565	241.0	0	cellulase activity	N/A
Pfam	UHGV-0271930_32	PF11839	N/A	N/A	Alanine-zipper, major outer membrane lipoprotein	Alanine_zipper
COG	UHGV-0271930_32	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
Pfam	UHGV-0271930_33	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0271930_33	COG1395	N/A	N/A	Predicted transcriptional regulator	N/A
structural_annotation	UHGV-0271930_33	PF13560,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0271930_34	K03111	55.4	7.7e-17	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0271930_34	phrog_26861	95.0	2.9e-28	N/A	unknown function
UniRef90	UHGV-0271930_34	UniRef90_A0A1C5P3X1	141.0	1.52e-38	Helix-destabilizing protein	N/A
eggNOG-mapper	UHGV-0271930_34	445973.CLOBAR_00339	136.0	2.1e-37	Single-strand binding protein family	N/A
Pfam	UHGV-0271930_34	PF00436	N/A	N/A	Single-strand binding protein family	SSB
COG	UHGV-0271930_34	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0271930_34	PF00436,PF13567,MF_00984,NF004476,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0271930_37	phrog_23726	48.7	9.9e-27	N/A	unknown function
eggNOG-mapper	UHGV-0271930_37	1151292.QEW_2436	92.0	1.26e-17	cell wall binding repeat	N/A
COG	UHGV-0271930_37	COG2247	N/A	N/A	Putative cell wall-binding domain (amidase enhancer), LytB superfamily	N/A
KOfam	UHGV-0271930_38	K22300	47.1	0.0000000000005	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0271930_38	phrog_8	40.6	0.000000000044	transcriptional regulator	transcription regulation
UniRef90	UHGV-0271930_38	UniRef90_UPI0006BF92BD	111.0	2.26e-29	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0271930_38	445972.ANACOL_03315	110.0	7.2e-30	N/A	N/A
Pfam	UHGV-0271930_38	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-0271930_38	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
KOfam	UHGV-0271930_39	K07741	192.7	0	antB; anti-repressor protein	N/A
PHROG	UHGV-0271930_39	phrog_63	160.4	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0271930_39	UniRef90_A0A1C6EMR2	333.0	0	Phage anti-repressor protein	N/A
eggNOG-mapper	UHGV-0271930_39	658655.HMPREF0988_02592	306.0	0	AntA/AntB antirepressor	N/A
Pfam	UHGV-0271930_39	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
Pfam	UHGV-0271930_39	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0271930_39	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-0271930_39	PF03374,PF08346,TIGR02681,COG3645,COG3561	N/A	N/A	N/A	N/A
PHROG	UHGV-0271930_43	phrog_2259	118.6	4.2e-35	Rnase H	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0271930_43	UniRef90_A0A350S1M9	204.0	0	N/A	N/A
eggNOG-mapper	UHGV-0271930_43	1356854.N007_05280	110.0	5.46e-28	3' exoribonuclease, RNase T-like	N/A
Pfam	UHGV-0271930_43	PF16473	N/A	N/A	3'-5' exoribonuclease Rv2179c-like domain	Rv2179c-like
structural_annotation	UHGV-0271930_43	PF21762,MF_00977,NF033638,COG0847	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0271930_46	1232453.BAIF02000057_gene1135	53.1	0.000000528	N/A	N/A
KOfam	UHGV-0271930_48	K07455	184.0	0	recT; recombination protein RecT	N/A
PHROG	UHGV-0271930_48	phrog_148	204.8	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0271930_48	UniRef90_A0A7G5N1F5	360.0	0	Recombinase RecT	N/A
eggNOG-mapper	UHGV-0271930_48	1298920.KI911353_gene2727	276.0	0	RecT family	N/A
Pfam	UHGV-0271930_48	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-0271930_48	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-0271930_48	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-0271930_48	PF03837,NF007351,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-0271930_49	phrog_15946	64.5	2.1e-18	N/A	unknown function
eggNOG-mapper	UHGV-0271930_49	1041147.AUFB01000014_gene330	82.0	1.15e-17	N/A	N/A
PHROG	UHGV-0271930_50	phrog_4652	44.3	0.0000000000028	N/A	unknown function
eggNOG-mapper	UHGV-0271930_50	397290.C810_01459	72.0	0.00000000000105	N/A	N/A
structural_annotation	UHGV-0271930_50	TIGR01898,COG1604	N/A	N/A	N/A	N/A
PHROG	UHGV-0271930_51	phrog_392	168.0	0	metal-dependent hydrolase	other
UniRef90	UHGV-0271930_51	UniRef90_A0A352SIH6	305.0	0	Lactamase_B domain-containing protein	N/A
eggNOG-mapper	UHGV-0271930_51	397290.C810_01486	174.0	0	May be involved in the transport of PQQ or its precursor to the periplasm	N/A
dbAPIS	UHGV-0271930_51	APIS058	N/A	N/A	N/A	N/A
COG	UHGV-0271930_51	COG1235	N/A	N/A	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	N/A
structural_annotation	UHGV-0271930_51	PF02112,MF_01818,NF041851,COG1234	N/A	N/A	N/A	N/A
PHROG	UHGV-0271930_54	phrog_7711	113.4	1.4e-33	N/A	unknown function
UniRef90	UHGV-0271930_54	UniRef90_A0A0N7JDH6	80.9	4.15e-17	N/A	N/A
eggNOG-mapper	UHGV-0271930_54	1226322.HMPREF1545_00031	96.7	4.55e-24	N/A	N/A
COG	UHGV-0271930_55	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0271930_55	PF09862,NF040595,COG3415	N/A	N/A	N/A	N/A
KOfam	UHGV-0271930_57	K03111	139.1	4.80001e-41	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0271930_57	phrog_44	144.4	6.69821e-43	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0271930_57	UniRef90_R6R1Y2	196.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0271930_57	1235790.C805_03410	192.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0271930_57	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0271930_57	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0271930_57	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0271930_57	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0271930_57	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
UniRef90	UHGV-0271930_59	UniRef90_A0A413HUB9	70.5	0.00000000000247	N/A	N/A
structural_annotation	UHGV-0271930_62	COG4481	N/A	N/A	N/A	N/A
PHROG	UHGV-0271930_63	phrog_13561	44.1	0.0000000000027	N/A	unknown function
structural_annotation	UHGV-0271930_63	PF21441	N/A	N/A	N/A	N/A
PHROG	UHGV-0271930_68	phrog_19106	269.3	0	N/A	unknown function
UniRef90	UHGV-0271930_68	UniRef90_A0A412RQV5	282.0	0	GIY-YIG nuclease family protein	N/A
eggNOG-mapper	UHGV-0271930_68	658655.HMPREF0988_00875	230.0	0	N/A	N/A
structural_annotation	UHGV-0271930_68	TIGR01453	N/A	N/A	N/A	N/A
PHROG	UHGV-0271930_69	phrog_1735	805.3	0	N/A	unknown function
eggNOG-mapper	UHGV-0271930_69	1163671.JAGI01000002_gene1273	889.0	0	Protein conserved in bacteria	N/A
COG	UHGV-0271930_69	COG4676	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0271930_69	COG4676	N/A	N/A	N/A	N/A
PHROG	UHGV-0271930_70	phrog_2018	120.2	1.1e-35	N/A	unknown function
eggNOG-mapper	UHGV-0271930_70	1163671.JAGI01000002_gene1274	127.0	2.38e-36	N/A	N/A
PHROG	UHGV-0271930_71	phrog_30930	58.1	1.8e-16	N/A	unknown function
UniRef90	UHGV-0271930_71	UniRef90_D2BQD3	64.3	0.000000000114	N/A	N/A
KOfam	UHGV-0271930_74	K00558	154.0	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0271930_74	phrog_116	175.6	0	DNA methyltransferase	other
UniRef90	UHGV-0271930_74	UniRef90_A0A1B9KCU6	832.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-0271930_74	1235800.C819_02255	520.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-0271930_74	MTase_II_00020	58.5	1e-31	Type II methyltransferase	RM
Pfam	UHGV-0271930_74	PF13403	N/A	N/A	Hint domain	Hint_2
Pfam	UHGV-0271930_74	PF14528	N/A	N/A	LAGLIDADG-like domain	LAGLIDADG_3
Pfam	UHGV-0271930_74	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-0271930_74	TIGR01443.1	N/A	N/A	intein C-terminal splicing region	N/A
COG	UHGV-0271930_74	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
PHROG	UHGV-0271930_75	phrog_21026	47.0	0.0000000000003	N/A	unknown function
structural_annotation	UHGV-0271930_76	PF10400,TIGR02501	N/A	N/A	N/A	N/A
PHROG	UHGV-0271930_77	phrog_10714	42.9	0.0000000000081	N/A	unknown function
PHROG	UHGV-0271930_79	phrog_9300	88.5	2.5e-26	N/A	unknown function
PHROG	UHGV-0271930_80	phrog_2245	75.6	5.5e-22	nucleoside triphosphate pyrophosphohydrolase	other

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0271930	Yes	49,246	40	56	1