vOTU vOTU-110339

vOTU: vOTU-110339

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-110339
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-01851 → vGENUS-02044 → vOTU-110339
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Anaerotignaceae → Anaerotignum → Anaerotignum faecicola
Host range breadth	Species
Lifestyle	temperate (evidence: geNomad)

Representative genome
Genome ID	UHGV-0136637
Biosample ID	N/A
Genome length (bp)	29,007 bps
CheckV completeness	68.08% (Medium-quality)
CDS count	46
CDS density	86.57%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Anaerotignaceae → Anaerotignum → Anaerotignum faecicola	Total connections	6	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Anaerotignaceae → Anaerotignum → Anaerotignum faecicola	Total connections	110	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 68.08)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0136637_3	phrog_2339	40.8	0.000000000024	HTH DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0136637_3	UniRef90_R6P148	84.7	1.71e-18	Helix-turn-helix domain protein	N/A
eggNOG-mapper	UHGV-0136637_3	1410622.JNKY01000015_gene360	72.8	0.0000000000000142	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0136637_3	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0136637_3	COG1813	N/A	N/A	Archaeal ribosome-binding protein aMBF1, putative translation factor, contains Zn-ribbon and HTH domains	N/A
structural_annotation	UHGV-0136637_4	PF05973,TIGR02683,COG3657	N/A	N/A	N/A	N/A
COG	UHGV-0136637_5	COG2333	N/A	N/A	DNA uptake channel protein ComEC C-terminal domain, metallo-beta-lactamase superfamily	N/A
KOfam	UHGV-0136637_6	K18830	45.9	0.000000000001	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0136637_6	phrog_4	42.3	0.000000000016	transcriptional repressor	transcription regulation
UniRef90	UHGV-0136637_6	UniRef90_R5AEY7	244.0	0	Helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-0136637_6	1235797.C816_03553	109.0	1.95e-28	DNA-binding helix-turn-helix protein	N/A
Pfam	UHGV-0136637_6	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-0136637_6	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0136637_6	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0136637_9	phrog_14088	52.4	0.000000000000007	N/A	unknown function
UniRef90	UHGV-0136637_13	UniRef90_A0A350U070	160.0	0	HTH_17 domain-containing protein (Fragment)	N/A
Pfam	UHGV-0136637_13	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
NCBIFam	UHGV-0136637_13	TIGR01764.1	N/A	N/A	excisionase family DNA-binding protein	N/A
PHROG	UHGV-0136637_16	phrog_997	106.0	2.9e-31	replication terminator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0136637_16	UniRef90_A0A350U067	242.0	0	Replication terminator protein	N/A
eggNOG-mapper	UHGV-0136637_16	1443125.Z962_p0033	75.9	7.18e-16	replication terminator protein, phage associated	N/A
PHROG	UHGV-0136637_17	phrog_1029	281.4	0	N/A	unknown function
eggNOG-mapper	UHGV-0136637_17	1510440.A0A068EPX8_9CAUD	216.0	0	N/A	N/A
structural_annotation	UHGV-0136637_17	PF10065,COG5532	N/A	N/A	N/A	N/A
KOfam	UHGV-0136637_18	K03111	136.7	2.69999e-40	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0136637_18	phrog_44	137.4	9.3e-41	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0136637_18	UniRef90_A0A401LG93	278.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0136637_18	97138.C820_02339	184.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0136637_18	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0136637_18	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0136637_18	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0136637_18	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0136637_18	PF00436,MF_00984,NF005579,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-0136637_19	K22300	52.5	3.7e-16	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0136637_19	phrog_8	49.2	0.000000000000001	transcriptional regulator	transcription regulation
UniRef90	UHGV-0136637_19	UniRef90_A0A401LG78	260.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0136637_19	1378168.N510_00479	51.2	0.00000246	sequence-specific DNA binding	N/A
Pfam	UHGV-0136637_19	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0136637_19	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0136637_19	PF12844,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0136637_20	phrog_7674	148.9	2.94273e-44	N/A	unknown function
eggNOG-mapper	UHGV-0136637_20	768710.DesyoDRAFT_1081	176.0	0	N/A	N/A
structural_annotation	UHGV-0136637_20	PF06003	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0136637_22	760568.Desku_0919	85.5	8.69e-18	N/A	N/A
structural_annotation	UHGV-0136637_22	PF03787,TIGR02581,COG1604	N/A	N/A	N/A	N/A
PHROG	UHGV-0136637_24	phrog_17690	123.9	5.7e-37	N/A	unknown function
eggNOG-mapper	UHGV-0136637_24	33035.JPJF01000107_gene432	107.0	2.76e-28	N/A	N/A
PHROG	UHGV-0136637_26	phrog_5968	149.3	1.96182e-44	replisome organizer	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0136637_26	UniRef90_A0A350TXF2	491.0	0	Phage_rep_org_N domain-containing protein	N/A
eggNOG-mapper	UHGV-0136637_26	632245.CLP_1613	155.0	3.39114e-43	N-terminal phage replisome organiser (Phage_rep_org_N)	N/A
Pfam	UHGV-0136637_26	PF09681	N/A	N/A	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
NCBIFam	UHGV-0136637_26	TIGR01714.1	N/A	N/A	phage replisome organizer, putative, N-terminal region	N/A
COG	UHGV-0136637_26	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0136637_26	PF06970,TIGR01714,COG5625	N/A	N/A	N/A	N/A
KOfam	UHGV-0136637_27	K02314	389.5	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-0136637_27	phrog_19	300.5	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0136637_27	UniRef90_A0A350TXF1	883.0	0	DNA helicase	N/A
eggNOG-mapper	UHGV-0136637_27	97138.C820_00625	279.0	0	Participates in initiation and elongation during chromosome replication	N/A
Pfam	UHGV-0136637_27	PF00772	N/A	N/A	DnaB-like helicase N terminal domain	DnaB
Pfam	UHGV-0136637_27	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-0136637_27	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-0136637_27	PF03796,PF00772,MF_04155,TIGR00665,COG0305	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0136637_29	PF07374,TIGR01636,COG2739	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0136637_30	PF20549,COG4728	N/A	N/A	N/A	N/A
KOfam	UHGV-0136637_32	K07727	42.5	0.000000000016	K07727; putative transcriptional regulator	N/A
UniRef90	UHGV-0136637_32	UniRef90_R5AM83	138.0	1.68997e-41	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0136637_32	445972.ANACOL_01859	94.0	1.15e-24	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0136637_32	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-0136637_32	COG3655	N/A	N/A	DNA-binding transcriptional regulator, XRE family	N/A
structural_annotation	UHGV-0136637_32	PF13443,NF000090,COG3655	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0136637_33	1235792.C808_02931	105.0	8.88e-29	N/A	N/A
KOfam	UHGV-0136637_34	K06218	77.9	3e-22	relE, stbE; mRNA interferase RelE/StbE	N/A
PHROG	UHGV-0136637_34	phrog_1213	78.1	1.1e-22	RelE-like toxin	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0136637_34	UniRef90_R5AEV9	163.0	0	Cytotoxic translational repressor of toxin-antitoxin stability system	N/A
eggNOG-mapper	UHGV-0136637_34	97139.C824_00468	128.0	5.69e-38	ParE toxin of type II toxin-antitoxin system, parDE	N/A
Pfam	UHGV-0136637_34	PF05016	N/A	N/A	ParE toxin of type II toxin-antitoxin system, parDE	ParE_toxin
COG	UHGV-0136637_34	COG2026	N/A	N/A	mRNA-degrading endonuclease RelE, toxin component of the RelBE toxin-antitoxin system	N/A
structural_annotation	UHGV-0136637_34	PF05016,TIGR00053,COG2026	N/A	N/A	N/A	N/A
PHROG	UHGV-0136637_35	phrog_309	68.7	7.4e-20	terminase small subunit	head and packaging
UniRef90	UHGV-0136637_35	UniRef90_A0A316MAA8	81.6	3.96e-16	Xaa-His dipeptidase	N/A
eggNOG-mapper	UHGV-0136637_35	97138.C820_00620	118.0	5.26e-31	transposase activity	N/A
COG	UHGV-0136637_35	COG2963	N/A	N/A	Transposase InsE and inactivated derivatives	N/A
structural_annotation	UHGV-0136637_35	PF07141	N/A	N/A	N/A	N/A
PHROG	UHGV-0136637_36	phrog_24361	102.2	3.9e-30	terminase	head and packaging
UniRef90	UHGV-0136637_36	UniRef90_R5AHR8	1114.0	0	Putative terminase large subunit	N/A
eggNOG-mapper	UHGV-0136637_36	693746.OBV_23980	533.0	0	phage Terminase large subunit	N/A
COG	UHGV-0136637_36	COG4373	N/A	N/A	Mu-like prophage FluMu protein gp28	N/A
structural_annotation	UHGV-0136637_36	PF03237,PF17289,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
KOfam	UHGV-0136637_37	K04763	108.8	7.4e-32	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-0136637_37	phrog_216	154.3	0	integrase	integration and excision
UniRef90	UHGV-0136637_37	UniRef90_R5AM78	367.0	0	Integrase family protein	N/A
eggNOG-mapper	UHGV-0136637_37	97138.C820_00621	194.0	0	integrase family	N/A
Pfam	UHGV-0136637_37	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0136637_37	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0136637_37	PF00589,MF_02055,NF040815,COG4973	N/A	N/A	N/A	N/A
PHROG	UHGV-0136637_38	phrog_156	281.4	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0136637_38	1519439.JPJG01000060_gene1886	476.0	0	N/A	N/A
structural_annotation	UHGV-0136637_38	PF16510,MF_04120,TIGR01542,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0136637_40	phrog_35275	48.5	0.00000000000015	N/A	unknown function
eggNOG-mapper	UHGV-0136637_40	693746.OBV_23910	78.2	0.0000000000000993	N/A	N/A
PHROG	UHGV-0136637_41	phrog_24113	41.7	0.000000000013	N/A	unknown function
structural_annotation	UHGV-0136637_41	PF11133,COG5471	N/A	N/A	N/A	N/A
PHROG	UHGV-0136637_42	phrog_371	134.1	1.1e-39	major head protein	head and packaging
UniRef90	UHGV-0136637_42	UniRef90_R5AAY6	669.0	0	Mu-like_gpT domain-containing protein	N/A
eggNOG-mapper	UHGV-0136637_42	1226322.HMPREF1545_03848	288.0	0	N/A	N/A
Pfam	UHGV-0136637_42	PF10124	N/A	N/A	Mu-like prophage major head subunit gpT	Mu-like_gpT
structural_annotation	UHGV-0136637_42	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0136637_43	phrog_13046	42.3	0.0000000000015	N/A	unknown function
eggNOG-mapper	UHGV-0136637_43	693746.OBV_23880	84.0	4.32e-17	N/A	N/A
structural_annotation	UHGV-0136637_43	PF20387	N/A	N/A	N/A	N/A
PHROG	UHGV-0136637_44	phrog_3287	146.7	1.59748e-43	virion structural protein	head and packaging
eggNOG-mapper	UHGV-0136637_44	693746.OBV_23870	574.0	0	N/A	N/A
structural_annotation	UHGV-0136637_44	PF11134,MF_01282,TIGR03300,COG5276	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0136637_45	665956.HMPREF1032_03261	65.5	0.00000000209	N/A	N/A
PHROG	UHGV-0136637_46	phrog_18723	57.7	1.5e-24	N/A	unknown function

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0136637	Yes	29,007	50	68	1