vOTU vOTU-111391

vOTU: vOTU-111391

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-111391
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00094 → vGENUS-00214 → vOTU-111391
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1394914
Biosample ID	N/A
Genome length (bp)	29,278 bps
CheckV completeness	79.41% (Medium-quality)
CDS count	48
CDS density	91.75%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135	Total connections	639	Host agreement	94.37
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170	Total connections	18	Host agreement	77.78

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 79.41)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-1394914_1	PF05082	N/A	N/A	N/A	N/A
PHROG	UHGV-1394914_2	phrog_26627	41.1	0.000000000017	N/A	unknown function
UniRef90	UHGV-1394914_2	UniRef90_A0A345KQM6	82.8	8.32e-16	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-1394914_2	1589750.A0A0C5AEL6_9CAUD	82.8	1.4e-16	N/A	N/A
structural_annotation	UHGV-1394914_5	PF10548	N/A	N/A	N/A	N/A
KOfam	UHGV-1394914_9	K22300	52.4	0.000000000000012	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
UniRef90	UHGV-1394914_9	UniRef90_A0A1Y4L0A2	132.0	1.39e-37	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1394914_9	748224.HMPREF9436_01444	112.0	4.48e-30	N/A	N/A
Pfam	UHGV-1394914_9	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1394914_9	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1394914_9	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1394914_11	622312.ROSEINA2194_02761	59.3	0.0000000495	NOG18738 non supervised orthologous group	N/A
COG	UHGV-1394914_11	COG2169	N/A	N/A	Methylphosphotriester-DNA--protein-cysteine methyltransferase (N-terminal fragment of Ada), contains Zn-binding and two AraC-type DNA-binding domains	N/A
structural_annotation	UHGV-1394914_11	PF02805	N/A	N/A	N/A	N/A
PHROG	UHGV-1394914_12	phrog_10292	74.2	1.1e-21	N/A	unknown function
UniRef90	UHGV-1394914_12	UniRef90_A0A416W984	95.9	9.04e-23	TM2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1394914_12	537013.CLOSTMETH_02269	80.5	3.89e-17	TM2 domain	N/A
Pfam	UHGV-1394914_12	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
Pfam	UHGV-1394914_12	PF05154	N/A	N/A	TM2 domain	TM2
COG	UHGV-1394914_12	COG2314	N/A	N/A	N/A	N/A
Pfam	UHGV-1394914_13	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1394914_13	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-1394914_13	PF12844,MF_00535,NF041677,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1394914_14	K06400	377.3	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1394914_14	phrog_95	365.5	0	integrase	integration and excision
UniRef90	UHGV-1394914_14	UniRef90_UPI00189960B8	504.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-1394914_14	1235835.C814_00825	412.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-1394914_14	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1394914_14	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-1394914_14	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-1394914_14	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1394914_14	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
UniRef90	UHGV-1394914_15	UniRef90_A0A8F0WD75	75.1	0.0000000000000877	RNA polymerase sigma factor/Ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-1394914_15	1378168.N510_03079	65.1	0.000000000204	N/A	N/A
UniRef90	UHGV-1394914_20	UniRef90_UPI00164AED9E	84.3	7.19e-19	helix-turn-helix domain-containing protein	N/A
structural_annotation	UHGV-1394914_20	PF13560,NF040522,COG2944	N/A	N/A	N/A	N/A
PHROG	UHGV-1394914_21	phrog_14030	143.8	1.10002e-42	N/A	unknown function
UniRef90	UHGV-1394914_21	UniRef90_R6LL81	244.0	0	SLH domain-containing protein	N/A
eggNOG-mapper	UHGV-1394914_21	1121866.AUGK01000003_gene1444	92.0	1.29e-18	amidase activity	N/A
COG	UHGV-1394914_21	COG1705	N/A	N/A	Flagellum-specific peptidoglycan hydrolase FlgJ	N/A
PHROG	UHGV-1394914_22	phrog_13256	67.2	1.4e-19	N/A	unknown function
eggNOG-mapper	UHGV-1394914_22	1226322.HMPREF1545_00132	73.6	2.37e-16	N/A	N/A
structural_annotation	UHGV-1394914_26	PF14600	N/A	N/A	N/A	N/A
PHROG	UHGV-1394914_28	phrog_37900	320.6	0	N/A	unknown function
UniRef90	UHGV-1394914_28	UniRef90_UPI001C3EA4DF	337.0	0	N/A	N/A
eggNOG-mapper	UHGV-1394914_28	552398.HMPREF0866_03098	235.0	0	N/A	N/A
Pfam	UHGV-1394914_28	PF19789	N/A	N/A	N/A	DUF6273
COG	UHGV-1394914_28	COG3827	N/A	N/A	Cell pole-organizing protein PopZ	N/A
structural_annotation	UHGV-1394914_28	PF19789	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1394914_30	PF16408,NF033510	N/A	N/A	N/A	N/A
PHROG	UHGV-1394914_31	phrog_10898	287.5	0	N/A	unknown function
UniRef90	UHGV-1394914_31	UniRef90_A0A7U3NJT3	191.0	0	Putative Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-1394914_31	717606.PaecuDRAFT_2136	66.6	0.000000000692	S-layer homology domain	N/A
COG	UHGV-1394914_31	COG1520	N/A	N/A	Outer membrane protein assembly factor BamB, contains PQQ-like beta-propeller repeat	N/A
structural_annotation	UHGV-1394914_31	PF19081,PF15418,MF_01905,NF032891,COG3291	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1394914_33	PF10651	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1394914_34	PF18614,MF_00085,NF003076	N/A	N/A	N/A	N/A
PHROG	UHGV-1394914_35	phrog_26795	130.5	9.7e-39	N/A	unknown function
UniRef90	UHGV-1394914_35	UniRef90_A0A5J6T4K8	130.0	1.1e-30	Minor tail protein	N/A
eggNOG-mapper	UHGV-1394914_35	1195236.CTER_5102	138.0	9.17e-35	N/A	N/A
structural_annotation	UHGV-1394914_35	PF14594,NF033848,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-1394914_36	phrog_37549	72.8	2.7e-24	virion structural protein	head and packaging
UniRef90	UHGV-1394914_36	UniRef90_A0A3D0W045	222.0	0	Fibronectin type-III domain-containing protein	N/A
eggNOG-mapper	UHGV-1394914_36	1195236.CTER_5103	125.0	3.24e-27	N/A	N/A
structural_annotation	UHGV-1394914_36	PF02010,PF06848,PF19266,MF_04116,NF033679,NF032891,TIGR01633,TIGR04488,COG3401,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1394914_37	phrog_33680	141.9	2.10055e-42	N/A	unknown function
UniRef90	UHGV-1394914_37	UniRef90_A0A1M6L1P7	214.0	0	Phage-related minor tail protein	N/A
eggNOG-mapper	UHGV-1394914_37	1195236.CTER_5104	211.0	0	nuclear chromosome segregation	N/A
COG	UHGV-1394914_37	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-1394914_37	TIGR01760,COG5280	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1394914_38	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-1394914_39	phrog_88	84.4	1.5e-24	major tail protein	tail
UniRef90	UHGV-1394914_39	UniRef90_S0FUN2	114.0	1.88e-28	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-1394914_39	1195236.CTER_5106	114.0	3.15e-29	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-1394914_39	TIGR01603.1	N/A	N/A	major tail protein	N/A
COG	UHGV-1394914_39	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1394914_39	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1394914_40	TIGR01725	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1394914_41	1487921.DP68_11350	60.1	0.000000000279	N/A	N/A
structural_annotation	UHGV-1394914_41	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-1394914_42	phrog_1951	75.6	4.5e-22	head-tail adaptor	connector
UniRef90	UHGV-1394914_42	UniRef90_UPI001B02B074	64.7	0.0000000000183	phage head closure protein	N/A
eggNOG-mapper	UHGV-1394914_42	1094508.Tsac_2422	53.9	0.0000000568	Phage head-tail joining protein	N/A
Pfam	UHGV-1394914_42	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-1394914_42	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
COG	UHGV-1394914_42	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-1394914_42	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1394914_43	phrog_5223	45.7	0.00000000000088	neck protein	connector
UniRef90	UHGV-1394914_43	UniRef90_B6W9Y5	61.6	0.000000000257	Putative phage DNA packaging protein	N/A
eggNOG-mapper	UHGV-1394914_43	561177.ANHYDRO_01411	61.6	0.0000000000431	N/A	N/A
PHROG	UHGV-1394914_44	phrog_10	180.5	0	major head protein	head and packaging
UniRef90	UHGV-1394914_44	UniRef90_UPI00189AE5FE	407.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-1394914_44	1280689.AUJC01000011_gene1521	389.0	0	Phage major capsid protein, HK97 family	N/A
Pfam	UHGV-1394914_44	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1394914_44	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1394914_44	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1394914_44	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-1394914_45	K01358	129.0	5.7e-38	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-1394914_45	phrog_94	198.5	0	head maturation protease	head and packaging
UniRef90	UHGV-1394914_45	UniRef90_UPI0018979DC8	202.0	0	Clp protease ClpP	N/A
eggNOG-mapper	UHGV-1394914_45	1280689.AUJC01000011_gene1520	185.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-1394914_45	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-1394914_45	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-1394914_45	PF00574,MF_00444,NF011090,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-1394914_46	phrog_12	178.5	0	portal protein	head and packaging
UniRef90	UHGV-1394914_46	UniRef90_UPI001898FCCE	503.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1394914_46	626523.GCWU000342_01027	501.0	0	Portal protein	N/A
Pfam	UHGV-1394914_46	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-1394914_46	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1394914_46	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-1394914_47	phrog_9	379.6	0	terminase large subunit	head and packaging
UniRef90	UHGV-1394914_47	UniRef90_A0A1Y3W5R1	784.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1394914_47	1203606.HMPREF1526_00981	736.0	0	Terminase	N/A
Pfam	UHGV-1394914_47	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1394914_47	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1394914_47	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1394914_47	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1394914_48	phrog_1066	129.6	1.2e-38	N/A	unknown function
eggNOG-mapper	UHGV-1394914_48	1341151.ASZU01000004_gene265	124.0	4.64e-35	N/A	N/A
structural_annotation	UHGV-1394914_48	PF05119,TIGR01558	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1394914	Yes	29,278	57	79	1