vOTU vOTU-113108

vOTU: vOTU-113108

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-113108
Number of genomes	1
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00001 → vSUBFAM-02545 → vGENUS-03149 → vOTU-113108
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Onthomonas
Host range breadth	Genus
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0033611
Biosample ID	SAMEA4766294
Genome length (bp)	39,238 bps
CheckV completeness	85.76% (Medium-quality)
CDS count	54
CDS density	93.55%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Onthomonas	Total connections	7	Host agreement	100
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 85.76)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0033611_1	phrog_2011	57.5	2.4e-16	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0033611_1	UniRef90_UPI000F6892F9	62.4	0.0000000039	phage repressor protein	N/A
eggNOG-mapper	UHGV-0033611_1	742738.HMPREF9460_02487	150.0	3.0268e-43	Phage regulatory protein Rha (Phage_pRha)	N/A
COG	UHGV-0033611_1	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
KOfam	UHGV-0033611_2	K07741	140.0	3.50002e-41	antB; anti-repressor protein	N/A
PHROG	UHGV-0033611_2	phrog_5817	101.3	1.1e-29	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0033611_2	UniRef90_A0A352NTP7	283.0	0	Oxidoreductase	N/A
eggNOG-mapper	UHGV-0033611_2	1414720.CBYM010000005_gene1349	274.0	0	Phage antirepressor protein KilAC domain	N/A
Pfam	UHGV-0033611_2	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
Pfam	UHGV-0033611_2	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0033611_2	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-0033611_2	PF03374,PF08346,TIGR02681,COG3645,COG3561	N/A	N/A	N/A	N/A
Pfam	UHGV-0033611_3	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
NCBIFam	UHGV-0033611_3	TIGR01764.1	N/A	N/A	excisionase family DNA-binding protein	N/A
COG	UHGV-0033611_3	COG1762	N/A	N/A	Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)	N/A
PHROG	UHGV-0033611_6	phrog_111	138.5	3.59994e-41	DNA methyltransferase	other
UniRef90	UHGV-0033611_6	UniRef90_A0A372V642	186.0	0	Adenine methyltransferase	N/A
eggNOG-mapper	UHGV-0033611_6	411468.CLOSCI_00567	184.0	0	DNA N-6-adenine-methyltransferase	N/A
PADLOC	UHGV-0033611_6	oMTase_00015	166.0	0	orphan methyltransferase	RM
Pfam	UHGV-0033611_6	PF05869	N/A	N/A	DNA N-6-adenine-methyltransferase (Dam)	Dam
structural_annotation	UHGV-0033611_6	PF05869,MF_03187,TIGR01712,COG2263	N/A	N/A	N/A	N/A
Pfam	UHGV-0033611_7	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
structural_annotation	UHGV-0033611_7	PF01381,MF_00535,TIGR03070,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0033611_9	phrog_408	46.2	0.00000000000073	N/A	unknown function
KOfam	UHGV-0033611_10	K07465	42.5	0.0000000000019	K07465; putative RecB family exonuclease	N/A
PHROG	UHGV-0033611_10	phrog_69	308.8	0	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0033611_10	UniRef90_UPI001D0763C3	268.0	0	N/A	N/A
eggNOG-mapper	UHGV-0033611_10	689781.AUJX01000031_gene132	263.0	0	N/A	N/A
Pfam	UHGV-0033611_10	PF10926	N/A	N/A	N/A	DUF2800
COG	UHGV-0033611_10	COG2887	N/A	N/A	RecB family exonuclease	N/A
structural_annotation	UHGV-0033611_10	PF10926,MF_03030,TIGR00372,COG2887	N/A	N/A	N/A	N/A
PHROG	UHGV-0033611_11	phrog_112	167.6	0	Gp2.5-like ssDNA binding protein and ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0033611_11	UniRef90_UPI001D063040	172.0	0	N/A	N/A
eggNOG-mapper	UHGV-0033611_11	394503.Ccel_3065	127.0	1.82e-34	N/A	N/A
Pfam	UHGV-0033611_11	PF10991	N/A	N/A	Enterobacter phage Enc34, ssDNA-binding protein	Enc34_ssDNA-bd
structural_annotation	UHGV-0033611_11	PF10991,MF_04153	N/A	N/A	N/A	N/A
KOfam	UHGV-0033611_12	K02334	840.0	0	dpo; DNA polymerase bacteriophage-type [EC:2.7.7.7]	N/A
PHROG	UHGV-0033611_12	phrog_17	404.2	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0033611_12	UniRef90_A0A412UNJ8	617.0	0	POLAc domain-containing protein	N/A
eggNOG-mapper	UHGV-0033611_12	441769.ABFU01000061_gene442	599.0	0	DNA polymerase A domain	N/A
Pfam	UHGV-0033611_12	PF00476	N/A	N/A	DNA polymerase family A	DNA_pol_A
COG	UHGV-0033611_12	COG0749	N/A	N/A	DNA polymerase I, 3'-5' exonuclease and polymerase domains	N/A
structural_annotation	UHGV-0033611_12	PF00476,MF_04101,NF011540,COG0749	N/A	N/A	N/A	N/A
PHROG	UHGV-0033611_13	phrog_256	1052.7	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0033611_13	UniRef90_UPI00101C9F44	796.0	0	virulence-associated E family protein	N/A
eggNOG-mapper	UHGV-0033611_13	748727.CLJU_c36530	756.0	0	virulence-associated E family protein	N/A
Pfam	UHGV-0033611_13	PF05272	N/A	N/A	Virulence-associated protein E-like domain	VapE-like_dom
COG	UHGV-0033611_13	COG5545	N/A	N/A	Predicted P-loop ATPase and inactivated derivatives	N/A
structural_annotation	UHGV-0033611_13	PF05272,MF_04000,NF005477,NF040562,COG5545	N/A	N/A	N/A	N/A
PHROG	UHGV-0033611_14	phrog_93	68.2	1.1e-19	endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0033611_14	UniRef90_A0A559U336	106.0	7.02e-28	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-0033611_14	320836.Q4ZD25_9CAUD	103.0	1.33e-27	hydrolase activity, acting on ester bonds	N/A
Pfam	UHGV-0033611_14	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
structural_annotation	UHGV-0033611_14	PF01974,MF_01490,NF002584	N/A	N/A	N/A	N/A
PHROG	UHGV-0033611_17	phrog_229	131.6	5.1e-39	MazG-like pyrophosphatase	other
UniRef90	UHGV-0033611_17	UniRef90_D7GNT7	144.0	1.5106e-42	MazG nucleotide pyrophosphohydrolase domain	N/A
eggNOG-mapper	UHGV-0033611_17	428125.CLOLEP_01391	128.0	4.16e-37	MazG nucleotide pyrophosphohydrolase domain	N/A
Pfam	UHGV-0033611_17	PF03819	N/A	N/A	MazG nucleotide pyrophosphohydrolase domain	MazG
COG	UHGV-0033611_17	COG1694	N/A	N/A	NTP pyrophosphatase, house-cleaning of non-canonical NTPs	N/A
structural_annotation	UHGV-0033611_17	PF03819,MF_01020,NF001613,COG0140	N/A	N/A	N/A	N/A
PHROG	UHGV-0033611_20	phrog_474	113.2	3.2e-33	phosphofructokinase	other
UniRef90	UHGV-0033611_20	UniRef90_UPI001956C5C7	101.0	3.18e-23	N/A	N/A
eggNOG-mapper	UHGV-0033611_20	428125.CLOLEP_01367	92.4	8.1e-22	N/A	N/A
Pfam	UHGV-0033611_20	PF19905	N/A	N/A	N/A	DUF6378
UniRef90	UHGV-0033611_21	UniRef90_UPI00129E4C6A	101.0	4.68e-25	N/A	N/A
Pfam	UHGV-0033611_21	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0033611_21	NF041588	N/A	N/A	N/A	N/A
UniRef90	UHGV-0033611_23	UniRef90_A0A316Q6P3	86.3	1.73e-19	Sigma70_r4_2 domain-containing protein	N/A
Pfam	UHGV-0033611_23	PF08281	N/A	N/A	Sigma-70, region 4	Sigma70_r4_2
PHROG	UHGV-0033611_24	phrog_6721	286.0	0	N/A	unknown function
eggNOG-mapper	UHGV-0033611_24	904296.HMPREF9124_0807	247.0	0	N/A	N/A
structural_annotation	UHGV-0033611_24	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
KOfam	UHGV-0033611_26	K14440	102.1	8.6e-31	SMARCAL1, HARP; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]	N/A
PHROG	UHGV-0033611_26	phrog_62	377.4	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0033611_26	UniRef90_A0A4Z0QKK3	518.0	0	DEAD/DEAH box helicase	N/A
eggNOG-mapper	UHGV-0033611_26	411902.CLOBOL_00156	513.0	0	COG COG0553 Superfamily II DNA RNA helicases, SNF2 family	N/A
PADLOC	UHGV-0033611_26	DpdE_00012	48.3	0.000000000000012	DpdE	DPD
Pfam	UHGV-0033611_26	PF00176	N/A	N/A	SNF2-related domain	SNF2-rel_dom
Pfam	UHGV-0033611_26	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-0033611_26	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
structural_annotation	UHGV-0033611_26	PF13872,PF16203,MF_01821,NF041790,COG0553	N/A	N/A	N/A	N/A
PHROG	UHGV-0033611_27	phrog_606	46.5	0.00000000000036	terminase small subunit	head and packaging
eggNOG-mapper	UHGV-0033611_27	877421.AUJT01000054_gene66	72.8	0.0000000000000764	N/A	N/A
Pfam	UHGV-0033611_27	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-0033611_27	PF16677	N/A	N/A	N/A	N/A
KOfam	UHGV-0033611_28	K03466	328.9	0	ftsK, spoIIIE; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family	N/A
PHROG	UHGV-0033611_28	phrog_1358	229.3	0	FtsK/SpoIIIE-like protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0033611_28	UniRef90_A0A535XLN7	238.0	0	FtsK domain-containing protein	N/A
eggNOG-mapper	UHGV-0033611_28	1169143.KB911034_gene954	228.0	0	Belongs to the FtsK SpoIIIE SftA family	N/A
PADLOC	UHGV-0033611_28	SspH_00004	167.1	0	SspH	SSP
Pfam	UHGV-0033611_28	PF01580	N/A	N/A	FtsK/SpoIIIE family	FtsK_SpoIIIE
COG	UHGV-0033611_28	COG1674	N/A	N/A	DNA segregation ATPase FtsK/SpoIIIE or related protein	N/A
eggNOG-mapper	UHGV-0033611_30	1304866.K413DRAFT_4686	61.2	0.000000000314	N/A	N/A
KOfam	UHGV-0033611_32	K06400	210.6	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0033611_32	phrog_95	202.3	0	integrase	integration and excision
UniRef90	UHGV-0033611_32	UniRef90_A0A3D4G6V8	346.0	0	Resolvase	N/A
eggNOG-mapper	UHGV-0033611_32	697329.Rumal_3466	236.0	0	resolvase	N/A
Pfam	UHGV-0033611_32	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0033611_32	PF07508	N/A	N/A	Recombinase	Recombinase
COG	UHGV-0033611_32	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0033611_32	PF00239,PF07508,NF041201,COG1961	N/A	N/A	N/A	N/A
UniRef90	UHGV-0033611_33	UniRef90_A0A1Q6L0U5	121.0	7.92e-33	SHOCT domain-containing protein	N/A
PHROG	UHGV-0033611_34	phrog_38	143.8	1.00053e-42	terminase large subunit	head and packaging
UniRef90	UHGV-0033611_34	UniRef90_UPI0018A0C9C4	599.0	0	phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0033611_34	1298920.KI911353_gene2682	239.0	0	TIGRFAM Phage	N/A
Pfam	UHGV-0033611_34	PF14528	N/A	N/A	LAGLIDADG-like domain	LAGLIDADG_3
COG	UHGV-0033611_34	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0033611_34	PF05203,PF17289,MF_04147,MF_01420,NF033889,NF007072,COG5362,COG1372	N/A	N/A	N/A	N/A
PHROG	UHGV-0033611_35	phrog_64	247.6	0	portal protein	head and packaging
UniRef90	UHGV-0033611_35	UniRef90_A0A414B012	619.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0033611_35	1121866.AUGK01000003_gene1429	422.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0033611_35	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0033611_35	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0033611_36	phrog_2468	72.8	4.5e-21	head morphogenesis	head and packaging
UniRef90	UHGV-0033611_36	UniRef90_A0A414B033	145.0	6.36999e-40	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0033611_36	1123263.AUKY01000015_gene1610	116.0	1.95e-29	cell adhesion	N/A
Pfam	UHGV-0033611_36	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-0033611_36	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0033611_36	PF04233,TIGR01641	N/A	N/A	N/A	N/A
PHROG	UHGV-0033611_38	phrog_247	264.1	0	major head protein	head and packaging
UniRef90	UHGV-0033611_38	UniRef90_A0A3D0LY55	384.0	0	Coat protein	N/A
eggNOG-mapper	UHGV-0033611_38	903814.ELI_3208	311.0	0	N/A	N/A
Pfam	UHGV-0033611_38	PF20036	N/A	N/A	Major capsid protein 13-like	Gp13-like
structural_annotation	UHGV-0033611_38	PF20036,MF_04113,TIGR04387,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-0033611_40	UniRef90_UPI001898B4B4	114.0	1.03e-30	phage head-tail connector protein	N/A
Pfam	UHGV-0033611_40	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-0033611_40	TIGR01560	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0033611_41	1121866.AUGK01000003_gene1432	75.9	6.33e-16	N/A	N/A
eggNOG-mapper	UHGV-0033611_42	1298920.KI911353_gene2654	58.2	0.00000004	N/A	N/A
structural_annotation	UHGV-0033611_43	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-0033611_44	phrog_158	55.4	0.0000000000000012	major tail protein	tail
UniRef90	UHGV-0033611_44	UniRef90_D7GQN5	199.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0033611_44	1232453.BAIF02000058_gene1634	103.0	1.53e-26	N/A	N/A
structural_annotation	UHGV-0033611_44	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-0033611_45	UniRef90_UPI0018A0054C	135.0	5.16e-39	N/A	N/A
eggNOG-mapper	UHGV-0033611_45	1123263.AUKY01000015_gene1618	80.5	3.2e-18	N/A	N/A
Pfam	UHGV-0033611_45	PF16478	N/A	N/A	N/A	DUF5055
structural_annotation	UHGV-0033611_45	PF16478	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0033611_46	1121333.JMLH01000047_gene1011	67.8	0.00000000000148	N/A	N/A
PHROG	UHGV-0033611_47	phrog_1535	164.9	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0033611_47	1123263.AUKY01000015_gene1620	128.0	5.16e-27	Phage tail tape measure protein TP901	N/A
COG	UHGV-0033611_47	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-0033611_47	PF09325	N/A	N/A	N/A	N/A
PHROG	UHGV-0033611_48	phrog_1194	114.2	5.9e-34	N/A	unknown function
eggNOG-mapper	UHGV-0033611_48	1400520.LFAB_05290	79.3	1.84e-17	N/A	N/A
Pfam	UHGV-0033611_48	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0033611_48	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0033611_49	phrog_6616	62.5	7.9e-33	tail protein	tail
eggNOG-mapper	UHGV-0033611_49	445971.ANASTE_00088	97.8	2.39e-18	N/A	N/A
structural_annotation	UHGV-0033611_49	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0033611_50	phrog_199	81.8	7.6e-24	holin	lysis
UniRef90	UHGV-0033611_50	UniRef90_A0A348ZBM4	173.0	0	Holin	N/A
eggNOG-mapper	UHGV-0033611_50	1298920.KI911353_gene4833	172.0	0	Bacteriophage holin family	N/A
Pfam	UHGV-0033611_50	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0033611_50	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-0033611_50	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-0033611_50	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
KOfam	UHGV-0033611_51	K01185	166.0	0	E3.2.1.17; lysozyme [EC:3.2.1.17]	N/A
PHROG	UHGV-0033611_51	phrog_7	196.3	0	endolysin	lysis
UniRef90	UHGV-0033611_51	UniRef90_A0A841WQ48	159.0	7.24471e-43	Lysozyme	N/A
eggNOG-mapper	UHGV-0033611_51	640513.Entas_4674	151.0	5.13996e-42	lysozyme	N/A
Pfam	UHGV-0033611_51	PF00959	N/A	N/A	Phage lysozyme	Phage_lysozyme
Pfam	UHGV-0033611_51	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0033611_51	COG3772	N/A	N/A	Phage-related lysozyme (muramidase), GH24 family	N/A
HAMAP	UHGV-0033611_51	MF_04110	N/A	N/A	Endolysin	N/A
structural_annotation	UHGV-0033611_51	PF01471,PF00959,MF_04110,COG3772,COG3409	N/A	N/A	N/A	N/A
UniRef90	UHGV-0033611_52	UniRef90_W3AIS5	106.0	7.31e-29	Response regulator (CheY-like receiver, AAA-type ATPase, and DNA-binding domain-containing protein)	N/A
eggNOG-mapper	UHGV-0033611_52	97139.C824_02817	76.6	1.28e-17	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0033611_52	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-0033611_52	PF13560,NF000090,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0033611_53	phrog_7940	234.3	0	N/A	unknown function
UniRef90	UHGV-0033611_53	UniRef90_UPI001379CFC9	274.0	0	toxin Bro	N/A
eggNOG-mapper	UHGV-0033611_53	546271.Selsp_1341	246.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-0033611_53	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
COG	UHGV-0033611_53	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0033611_53	PF02498,TIGR02681,COG3617	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0033611	Yes	39,238	56	86	1