vOTU vOTU-113674

vOTU: vOTU-113674

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-113674
Number of genomes	1
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00116 → vGENUS-00624 → vOTU-113674
Host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus
Host range breadth	Genus
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1512342
Biosample ID	N/A
Genome length (bp)	23,824 bps
CheckV completeness	71.89% (Medium-quality)
CDS count	36
CDS density	95.84%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus	Total connections	73	Host agreement	100
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 71.89)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1512342_1	K07273	100.5	2e-29	acm; lysozyme	N/A
PHROG	UHGV-1512342_1	phrog_6745	221.9	0	endolysin	lysis
UniRef90	UHGV-1512342_1	UniRef90_A0A428IAU5	514.0	0	Lysozyme	N/A
eggNOG-mapper	UHGV-1512342_1	1297534.CAUJ01000005_gene165	530.0	0	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-1512342_1	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-1512342_1	PF01473	N/A	N/A	Putative cell wall binding repeat	Choline_bind_1
Pfam	UHGV-1512342_1	PF19085	N/A	N/A	Choline-binding repeat	Choline_bind_2
COG	UHGV-1512342_1	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-1512342_1	PF01183,PF19127,TIGR04035,COG5263,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-1512342_2	phrog_33625	74.0	1.2e-21	holin	lysis
UniRef90	UHGV-1512342_2	UniRef90_A0A1F0TGD2	174.0	0	Holin	N/A
eggNOG-mapper	UHGV-1512342_2	644007.C5J977_9CAUD	175.0	0	Bacteriophage holin	N/A
Pfam	UHGV-1512342_2	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-1512342_2	TIGR01598.1	N/A	N/A	phage holin	N/A
structural_annotation	UHGV-1512342_2	COG5546	N/A	N/A	N/A	N/A
PHROG	UHGV-1512342_3	phrog_199	56.9	2.8e-16	holin	lysis
UniRef90	UHGV-1512342_3	UniRef90_A0A3R9KVL9	239.0	0	Holin family protein	N/A
eggNOG-mapper	UHGV-1512342_3	413066.A1EAB5_9CAUD	160.0	0	Pfam:Phage_holin_4_1	N/A
Pfam	UHGV-1512342_3	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-1512342_3	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
structural_annotation	UHGV-1512342_3	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-1512342_4	phrog_1554	190.4	0	N/A	unknown function
UniRef90	UHGV-1512342_4	UniRef90_UPI001B9C9A73	189.0	0	N/A	N/A
eggNOG-mapper	UHGV-1512342_4	1000588.HMPREF9965_1687	360.0	0	N/A	N/A
structural_annotation	UHGV-1512342_4	PF07104	N/A	N/A	N/A	N/A
PHROG	UHGV-1512342_5	phrog_12683	128.4	1.9e-38	N/A	unknown function
UniRef90	UHGV-1512342_5	UniRef90_A0A081R6K4	108.0	1.63e-29	ATP synthase F0 sector subunit C	N/A
eggNOG-mapper	UHGV-1512342_5	1095737.HMPREF1110_1748	110.0	4.72e-31	N/A	N/A
PHROG	UHGV-1512342_6	phrog_1210	629.2	0	PblB-type receptor binding	other
UniRef90	UHGV-1512342_6	UniRef90_A0A7L8ZLA3	1814.0	0	Endopeptidase	N/A
eggNOG-mapper	UHGV-1512342_6	888049.HMPREF8578_0708	1369.0	0	Phage minor structural protein	N/A
Pfam	UHGV-1512342_6	PF18994	N/A	N/A	Prophage endopeptidase tail N-terminal domain	Prophage_tailD1
Pfam	UHGV-1512342_6	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
NCBIFam	UHGV-1512342_6	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1512342_6	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1512342_6	PF14594,PF00629,TIGR01665,TIGR04362,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1512342_7	phrog_33	53.9	5.3e-16	distal tail protein Dit	tail
UniRef90	UHGV-1512342_7	UniRef90_A0A1F0TGE5	434.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1512342_7	888049.HMPREF8578_0707	463.0	0	N/A	N/A
structural_annotation	UHGV-1512342_7	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1512342_8	phrog_5755	396.3	0	tail length tape measure protein	tail
UniRef90	UHGV-1512342_8	UniRef90_F9Q552	1426.0	0	Phage tail tape measure protein, TP901 family	N/A
eggNOG-mapper	UHGV-1512342_8	644007.C5J971_9CAUD	1209.0	0	peptidoglycan catabolic process	N/A
Pfam	UHGV-1512342_8	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-1512342_8	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
structural_annotation	UHGV-1512342_8	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-1512342_9	phrog_709	146.6	7.28675e-44	N/A	unknown function
UniRef90	UHGV-1512342_9	UniRef90_A0A0E4CSV4	187.0	0	Prophage pi2 protein 40	N/A
eggNOG-mapper	UHGV-1512342_9	888049.HMPREF8578_0705	270.0	0	N/A	N/A
structural_annotation	UHGV-1512342_9	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-1512342_10	phrog_88	160.8	0	major tail protein	tail
UniRef90	UHGV-1512342_10	UniRef90_F5W033	327.0	0	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-1512342_10	644007.C5J969_9CAUD	380.0	0	N/A	N/A
NCBIFam	UHGV-1512342_10	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-1512342_10	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-1512342_11	phrog_78	47.0	0.00000000000052	tail terminator	connector
UniRef90	UHGV-1512342_11	UniRef90_T0U477	150.0	5.60519e-45	Prophage pi2 protein 38	N/A
eggNOG-mapper	UHGV-1512342_11	644007.C5J968_9CAUD	198.0	0	aminopeptidase activity	N/A
structural_annotation	UHGV-1512342_11	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-1512342_12	phrog_5	41.2	0.000000000044	tail completion or Neck1 protein	connector
UniRef90	UHGV-1512342_12	UniRef90_A0A098ANM6	199.0	0	Bacteriophage pi2 protein 37	N/A
eggNOG-mapper	UHGV-1512342_12	644007.C5J967_9CAUD	199.0	0	exonuclease activity	N/A
Pfam	UHGV-1512342_12	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-1512342_12	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-1512342_13	phrog_1951	136.4	6.09999e-41	head-tail adaptor	connector
UniRef90	UHGV-1512342_13	UniRef90_UPI000B58A5F0	181.0	0	phage head closure protein	N/A
eggNOG-mapper	UHGV-1512342_13	888049.HMPREF8578_0701	193.0	0	head-tail adaptor	N/A
NCBIFam	UHGV-1512342_13	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
COG	UHGV-1512342_13	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-1512342_13	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1512342_14	phrog_2550	142.8	3.9937e-43	N/A	unknown function
UniRef90	UHGV-1512342_14	UniRef90_A0A081R3E6	186.0	0	Prophage pi2 protein 35	N/A
eggNOG-mapper	UHGV-1512342_14	888049.HMPREF8578_0700	185.0	0	N/A	N/A
structural_annotation	UHGV-1512342_14	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1512342_15	phrog_390	95.8	2.7e-28	Arc-like repressor	transcription regulation
UniRef90	UHGV-1512342_15	UniRef90_A0A0P0N6K2	88.6	7.14e-21	Phage transcriptional terminator	N/A
eggNOG-mapper	UHGV-1512342_15	1405498.SSIM_04855	49.3	0.00000261	Rho termination factor, N-terminal domain	N/A
PHROG	UHGV-1512342_16	phrog_10	166.6	0	major head protein	head and packaging
UniRef90	UHGV-1512342_16	UniRef90_E6KKD3	624.0	0	Phage major capsid protein, HK97 family	N/A
eggNOG-mapper	UHGV-1512342_16	888049.HMPREF8578_0698	624.0	0	capsid protein	N/A
Pfam	UHGV-1512342_16	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1512342_16	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1512342_16	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1512342_16	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-1512342_17	K06904	130.9	1.3e-38	N/A	N/A
PHROG	UHGV-1512342_17	phrog_80	166.3	0	head maturation protease	head and packaging
UniRef90	UHGV-1512342_17	UniRef90_E6KKD2	378.0	0	Phage prohead protease, HK97 family	N/A
eggNOG-mapper	UHGV-1512342_17	644007.C5J962_9CAUD	382.0	0	peptidase activity	N/A
Pfam	UHGV-1512342_17	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-1512342_17	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
structural_annotation	UHGV-1512342_17	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-1512342_18	phrog_12	190.2	0	portal protein	head and packaging
UniRef90	UHGV-1512342_18	UniRef90_UPI001CBC02E6	728.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1512342_18	888049.HMPREF8578_0696	785.0	0	Phage portal protein	N/A
Pfam	UHGV-1512342_18	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-1512342_18	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-1512342_18	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1512342_18	PF04860,MF_04120,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-1512342_19	phrog_2955	123.6	4.1e-37	N/A	unknown function
UniRef90	UHGV-1512342_19	UniRef90_A0A062WVS8	120.0	3.58e-34	N/A	N/A
PHROG	UHGV-1512342_20	phrog_9	344.5	0	terminase large subunit	head and packaging
UniRef90	UHGV-1512342_20	UniRef90_A0A7G1IQ86	1090.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1512342_20	644007.C5J959_9CAUD	1136.0	0	Phage Terminase	N/A
Pfam	UHGV-1512342_20	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1512342_20	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
structural_annotation	UHGV-1512342_20	PF20441,PF03354,MF_04013,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1512342_21	phrog_361	153.6	0	terminase small subunit	head and packaging
UniRef90	UHGV-1512342_21	UniRef90_A0A414CIM9	224.0	0	POU-specific domain-containing protein	N/A
eggNOG-mapper	UHGV-1512342_21	1005705.HMPREF9967_1038	247.0	0	Phage terminase, small subunit	N/A
Pfam	UHGV-1512342_21	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
COG	UHGV-1512342_21	COG3747	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1512342_21	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-1512342_22	phrog_119	68.7	9.3e-20	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1512342_22	UniRef90_A0A062WSH4	226.0	0	Bacteriophage nuclease	N/A
eggNOG-mapper	UHGV-1512342_22	888049.HMPREF8578_0692	226.0	0	endonuclease activity	N/A
COG	UHGV-1512342_22	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
KOfam	UHGV-1512342_24	K04763	103.6	2.6e-30	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-1512342_24	phrog_216	188.4	0	integrase	integration and excision
UniRef90	UHGV-1512342_24	UniRef90_A0A4D6B299	357.0	0	Site-specific recombinase	N/A
eggNOG-mapper	UHGV-1512342_24	644007.C5J955_9CAUD	358.0	0	Phage integrase family	N/A
Pfam	UHGV-1512342_24	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
structural_annotation	UHGV-1512342_24	PF00589,MF_02055,NF040815,COG4973	N/A	N/A	N/A	N/A
PHROG	UHGV-1512342_25	phrog_36	76.5	4.4e-22	transcriptional regulator	transcription regulation
UniRef90	UHGV-1512342_25	UniRef90_E6KKC4	254.0	0	Phage transcriptional regulator, RinA family	N/A
eggNOG-mapper	UHGV-1512342_25	1123315.AUIP01000003_gene229	87.8	2.16e-20	Transcriptional regulator, RinA family	N/A
NCBIFam	UHGV-1512342_25	TIGR01636.1	N/A	N/A	phage transcriptional regulator, RinA family	N/A
structural_annotation	UHGV-1512342_25	PF05263,TIGR01636	N/A	N/A	N/A	N/A
KOfam	UHGV-1512342_26	K22299	45.4	0.0000000000018	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-1512342_26	phrog_8	59.0	1.2e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-1512342_26	UniRef90_A0A0F3HHX3	226.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1512342_26	1280.SAXN108_1969	48.9	0.00000663	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-1512342_26	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1512342_26	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1512342_26	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1512342_27	phrog_7626	143.8	2.60642e-43	N/A	unknown function
PHROG	UHGV-1512342_28	phrog_8899	216.9	0	N/A	unknown function
UniRef90	UHGV-1512342_28	UniRef90_A0A139N1V3	195.0	0	N/A	N/A
PHROG	UHGV-1512342_29	phrog_884	61.8	1.1e-17	N/A	unknown function
UniRef90	UHGV-1512342_29	UniRef90_UPI00094EDA92	116.0	1.74e-32	N/A	N/A
eggNOG-mapper	UHGV-1512342_29	365659.smi_0433	52.8	0.0000000491	N/A	N/A
Pfam	UHGV-1512342_29	PF07116	N/A	N/A	N/A	DUF1372
structural_annotation	UHGV-1512342_29	PF07116,COG3585	N/A	N/A	N/A	N/A
PHROG	UHGV-1512342_31	phrog_2003	164.0	0	N/A	unknown function
UniRef90	UHGV-1512342_31	UniRef90_UPI000AB188AB	144.0	4.52059e-42	N/A	N/A
UniRef90	UHGV-1512342_32	UniRef90_F9PY74	84.0	1.3e-20	Conserved domain protein	N/A
PHROG	UHGV-1512342_33	phrog_13581	177.8	0	N/A	unknown function
eggNOG-mapper	UHGV-1512342_33	644007.C5J997_9CAUD	190.0	0	N/A	N/A
KOfam	UHGV-1512342_34	K22300	59.2	1e-16	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1512342_34	phrog_8	75.9	7.9e-22	transcriptional regulator	transcription regulation
UniRef90	UHGV-1512342_34	UniRef90_A0A1F0BS02	261.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1512342_34	996306.SSUR61_1532	87.8	6.33e-20	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1512342_34	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1512342_34	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1512342_34	PF12844,MF_00535,NF041575,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-1512342_35	K03111	158.8	0	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1512342_35	phrog_44	179.7	0	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1512342_35	UniRef90_A0A3P1VHI6	265.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1512342_35	644007.C5J996_9CAUD	265.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-1512342_35	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1512342_35	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1512342_35	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1512342_35	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1512342_36	phrog_6716	178.6	0	N/A	unknown function
UniRef90	UHGV-1512342_36	UniRef90_A0A0X8UVP8	196.0	0	3-dehydroquinate synthase	N/A
structural_annotation	UHGV-1512342_36	PF10694	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1512342	Yes	23,824	40	72	1