vOTU vOTU-114008

vOTU: vOTU-114008

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-114008
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00040 → vSUBFAM-01333 → vOTU-114008
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales
Host range breadth	Order
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0182395
Biosample ID	N/A
Genome length (bp)	30,574 bps
CheckV completeness	75.86% (Medium-quality)
CDS count	46
CDS density	87.91%
tRNA count	2
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales	Total connections	6	Host agreement	83.33
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 75.86)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0182395_1	UniRef90_A0A1C6H462	288.0	0	LPD3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0182395_1	693746.OBV_01590	276.0	0	N/A	N/A
KOfam	UHGV-0182395_2	K14059	105.8	4.6e-31	int; integrase	N/A
PHROG	UHGV-0182395_2	phrog_1	131.4	7.6e-39	integrase	integration and excision
UniRef90	UHGV-0182395_2	UniRef90_A0A3D3Y5E0	303.0	0	Integrase	N/A
eggNOG-mapper	UHGV-0182395_2	445972.ANACOL_01797	173.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0182395_2	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
Pfam	UHGV-0182395_2	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0182395_2	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0182395_2	PF00589,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0182395_3	PF02255,NF007156,COG1447	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0182395_6	PF01047,NF001066,COG2771	N/A	N/A	N/A	N/A
PHROG	UHGV-0182395_7	phrog_10091	102.1	3.6e-30	holin	lysis
UniRef90	UHGV-0182395_7	UniRef90_A0A1Y4RHF4	130.0	7.85e-38	Phage holin	N/A
eggNOG-mapper	UHGV-0182395_7	97139.C824_05950	118.0	9.4e-34	Bacteriophage holin	N/A
Pfam	UHGV-0182395_7	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-0182395_7	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-0182395_7	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0182395_7	COG5546	N/A	N/A	N/A	N/A
PHROG	UHGV-0182395_8	phrog_1863	60.7	1.5e-17	N/A	unknown function
eggNOG-mapper	UHGV-0182395_8	748224.HMPREF9436_00408	90.9	4.14e-23	N/A	N/A
KOfam	UHGV-0182395_9	K08640	86.3	6e-25	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-0182395_9	phrog_2649	50.3	9.7e-18	endolysin	lysis
UniRef90	UHGV-0182395_9	UniRef90_R5EEL2	145.0	3.54e-40	Putative muramoyl-pentapeptide carboxypeptidase	N/A
eggNOG-mapper	UHGV-0182395_9	903814.ELI_0090	89.0	1.85e-19	Peptidoglycan-binding domain 1 protein	N/A
Pfam	UHGV-0182395_9	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
Pfam	UHGV-0182395_9	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
COG	UHGV-0182395_9	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0182395_9	PF05951,PF01471,TIGR02869,COG3108	N/A	N/A	N/A	N/A
KOfam	UHGV-0182395_11	K08131	48.2	0.000000000000045	COL9A; collagen type IX alpha	N/A
PHROG	UHGV-0182395_11	phrog_5073	69.7	3.6e-20	tail fiber protein	tail
eggNOG-mapper	UHGV-0182395_11	877414.ATWA01000062_gene1616	65.5	0.0000000155	N/A	N/A
Pfam	UHGV-0182395_11	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
structural_annotation	UHGV-0182395_11	PF10651,NF033814	N/A	N/A	N/A	N/A
PHROG	UHGV-0182395_12	phrog_2310	46.8	0.00000000000029	N/A	unknown function
eggNOG-mapper	UHGV-0182395_12	1151292.QEW_0364	47.4	0.00000181	N/A	N/A
structural_annotation	UHGV-0182395_14	PF03425,NF038128,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-0182395_16	phrog_156	117.7	4.4e-35	portal protein	head and packaging
eggNOG-mapper	UHGV-0182395_16	693746.OBV_01670	483.0	0	N/A	N/A
structural_annotation	UHGV-0182395_16	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0182395_18	phrog_422	95.8	4.4e-28	major head protein	head and packaging
UniRef90	UHGV-0182395_18	UniRef90_A0A6A8VJ17	267.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0182395_18	693746.OBV_01700	167.0	1.4013e-45	N/A	N/A
Pfam	UHGV-0182395_18	PF13287	N/A	N/A	Fn3 associated	Fn3_assoc
structural_annotation	UHGV-0182395_18	PF19821,PF13287,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0182395_20	K06909	142.1	4.99983e-42	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0182395_20	phrog_979	126.6	1.4e-39	terminase large subunit	head and packaging
UniRef90	UHGV-0182395_20	UniRef90_A0A6A8VHX7	502.0	0	Terminase_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0182395_20	693746.OBV_01690	482.0	0	phage Terminase large subunit	N/A
Pfam	UHGV-0182395_20	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-0182395_20	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0182395_20	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0182395_23	phrog_15863	148.6	2.38221e-44	N/A	unknown function
UniRef90	UHGV-0182395_23	UniRef90_A0A3D2HRL5	141.0	4.94e-40	Molecular chaperone DnaJ	N/A
eggNOG-mapper	UHGV-0182395_23	714943.Mucpa_0445	130.0	1.85e-36	SPTR Heat shock protein DnaJ domain protein	N/A
COG	UHGV-0182395_23	COG2214	N/A	N/A	Curved DNA-binding protein CbpA, contains a DnaJ-like domain	N/A
structural_annotation	UHGV-0182395_28	PF13443,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0182395_30	K22300	46.2	0.00000000000086	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0182395_30	phrog_8	43.8	0.0000000000051	transcriptional regulator	transcription regulation
UniRef90	UHGV-0182395_30	UniRef90_UPI00189E0F3C	93.2	6.36e-22	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0182395_30	1235793.C809_02627	71.2	0.0000000000000735	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0182395_30	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0182395_30	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
PHROG	UHGV-0182395_41	phrog_21613	86.6	2.3e-25	N/A	unknown function
eggNOG-mapper	UHGV-0182395_41	1007096.BAGW01000023_gene153	210.0	0	N/A	N/A
PHROG	UHGV-0182395_42	phrog_1227	200.9	0	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0182395_42	UniRef90_UPI00164E5A62	269.0	0	PD-(D/E)XK nuclease-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0182395_42	1007096.BAGW01000023_gene152	266.0	0	N/A	N/A
Pfam	UHGV-0182395_42	PF12684	N/A	N/A	N/A	DUF3799
COG	UHGV-0182395_42	COG1074	N/A	N/A	3'-5' helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	N/A
structural_annotation	UHGV-0182395_42	PF12684,TIGR01896,COG4343	N/A	N/A	N/A	N/A
KOfam	UHGV-0182395_43	K03111	135.6	5.5e-40	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0182395_43	phrog_44	142.4	2.59941e-42	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0182395_43	UniRef90_UPI001C118A83	176.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0182395_43	877414.ATWA01000008_gene232	176.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-0182395_43	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0182395_43	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0182395_43	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0182395_43	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0182395_43	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0182395_44	phrog_15768	58.2	1.7e-16	N/A	unknown function
eggNOG-mapper	UHGV-0182395_44	1121344.JHZO01000003_gene982	53.9	0.00000859	N/A	N/A
Pfam	UHGV-0182395_44	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-0182395_44	PF19808	N/A	N/A	N/A	N/A
Pfam	UHGV-0182395_45	PF09889	N/A	N/A	N/A	DUF2116
structural_annotation	UHGV-0182395_45	PF09889,MF_00649,COG4068	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0182395	Yes	30,574	56	76	1
UHGV-0204348	No	30,522	56	76	1