vOTU vOTU-114033

vOTU: vOTU-114033

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-114033
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes
Taxonomy (UHGV)	vFAM-00011 → vSUBFAM-00019 → vGENUS-00174 → vOTU-114033
Host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus thermophilus
Host range breadth	Species
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1485278
Biosample ID	SAMEA4545282
Genome length (bp)	25,376 bps
CheckV completeness	66.63% (Medium-quality)
CDS count	30
CDS density	92.89%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus thermophilus	Total connections	306	Host agreement	96.73
PHIST-predicted host lineage	Bacteria → Firmicutes	Total connections	2	Host agreement	50

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 66.63)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1485278_1	phrog_5702	106.4	6.8e-32	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1485278_1	UniRef90_A0A2I6QQY0	199.0	0	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-1485278_1	90410.Q9XJD1_9CAUD	201.0	0	hydrolase activity, acting on ester bonds	N/A
Pfam	UHGV-1485278_1	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
structural_annotation	UHGV-1485278_1	PF01870,MF_00130,NF002581,COG1591	N/A	N/A	N/A	N/A
PHROG	UHGV-1485278_2	phrog_1982	129.7	5e-39	N/A	unknown function
UniRef90	UHGV-1485278_2	UniRef90_A0A448A968	126.0	3.53e-36	Gp89	N/A
structural_annotation	UHGV-1485278_2	PF13560,NF040507,COG1813	N/A	N/A	N/A	N/A
PHROG	UHGV-1485278_3	phrog_803	62.5	7.4e-18	host nuclease inhibitor	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1485278_3	UniRef90_B0YL92	85.1	9.53e-21	Orf42	N/A
eggNOG-mapper	UHGV-1485278_3	1123309.AQYB01000014_gene918	70.9	7.43e-16	N/A	N/A
PHROG	UHGV-1485278_4	phrog_1489	107.1	6.8e-32	N/A	unknown function
UniRef90	UHGV-1485278_4	UniRef90_Q9MCL8	92.4	8.38e-24	ORF12	N/A
structural_annotation	UHGV-1485278_4	PF13773	N/A	N/A	N/A	N/A
KOfam	UHGV-1485278_5	K22300	48.4	0.00000000000021	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1485278_5	phrog_1994	288.9	0	DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1485278_5	UniRef90_Q9XJD5	324.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1485278_5	1385385.U6E975_9CAUD	247.0	0	sequence-specific DNA binding	N/A
Pfam	UHGV-1485278_5	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1485278_5	PF01381,PF12643,MF_01019,NF041951,COG1476,COG1694	N/A	N/A	N/A	N/A
PHROG	UHGV-1485278_6	phrog_884	123.2	7.7e-37	N/A	unknown function
UniRef90	UHGV-1485278_6	UniRef90_Q9XJU3	164.0	0	Orf98 gp	N/A
Pfam	UHGV-1485278_6	PF07116	N/A	N/A	N/A	DUF1372
structural_annotation	UHGV-1485278_6	PF07116,COG3585	N/A	N/A	N/A	N/A
PHROG	UHGV-1485278_7	phrog_1814	474.0	0	N/A	unknown function
UniRef90	UHGV-1485278_7	UniRef90_Q9XJU2	451.0	0	Orf235 gp	N/A
Pfam	UHGV-1485278_7	PF07067	N/A	N/A	N/A	DUF1340
structural_annotation	UHGV-1485278_7	PF07067	N/A	N/A	N/A	N/A
PHROG	UHGV-1485278_8	phrog_248	145.0	3.40516e-43	transcriptional activator	transcription regulation
UniRef90	UHGV-1485278_8	UniRef90_A0A286QR68	274.0	0	ArpU late transcriptional regulator	N/A
eggNOG-mapper	UHGV-1485278_8	173707.Q938L8_9CAUD	138.0	3.46999e-40	N/A	N/A
NCBIFam	UHGV-1485278_8	TIGR01637.1	N/A	N/A	ArpU family phage packaging/lysis transcriptional regulator	N/A
structural_annotation	UHGV-1485278_8	PF05263,MF_00674,TIGR01637,COG1191	N/A	N/A	N/A	N/A
KOfam	UHGV-1485278_9	K07474	59.6	1.1e-16	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1485278_9	phrog_51	87.8	1.5e-25	terminase small subunit	head and packaging
UniRef90	UHGV-1485278_9	UniRef90_C9W9H3	272.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-1485278_9	1054460.SPPN_00130	113.0	6.45e-30	DNA packaging	N/A
Pfam	UHGV-1485278_9	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1485278_9	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1485278_9	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-1485278_10	K06909	46.4	0.00000000000047	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1485278_10	phrog_2	52.0	0.000000000000015	terminase large subunit	head and packaging
UniRef90	UHGV-1485278_10	UniRef90_B0YL54	457.0	0	Orf4	N/A
eggNOG-mapper	UHGV-1485278_10	1385385.U6E9B3_9CAUD	445.0	0	Terminase-like family	N/A
Pfam	UHGV-1485278_10	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
structural_annotation	UHGV-1485278_10	PF04466,MF_04145,TIGR01547,COG5323	N/A	N/A	N/A	N/A
KOfam	UHGV-1485278_11	K06909	55.4	0.000000000000001	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1485278_11	phrog_5653	211.0	0	terminase large subunit	head and packaging
UniRef90	UHGV-1485278_11	UniRef90_Q56SA2	389.0	0	Terminase large subunit	N/A
eggNOG-mapper	UHGV-1485278_11	1385385.U6E9B3_9CAUD	393.0	0	Terminase-like family	N/A
Pfam	UHGV-1485278_11	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
structural_annotation	UHGV-1485278_11	PF17289,MF_04148,TIGR01547,COG5323	N/A	N/A	N/A	N/A
PHROG	UHGV-1485278_12	phrog_64	442.6	0	portal protein	head and packaging
UniRef90	UHGV-1485278_12	UniRef90_O80165	925.0	0	Gp502	N/A
eggNOG-mapper	UHGV-1485278_12	306323.Q56SA1_9CAUD	936.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1485278_12	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-1485278_12	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-1485278_12	PF05133,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
PHROG	UHGV-1485278_13	phrog_115	263.9	0	minor head protein	head and packaging
UniRef90	UHGV-1485278_13	UniRef90_U6E9F1	536.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-1485278_13	1385385.U6E9F1_9CAUD	536.0	0	Phage Mu protein F like protein	N/A
Pfam	UHGV-1485278_13	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-1485278_13	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
structural_annotation	UHGV-1485278_13	PF06152,TIGR01641	N/A	N/A	N/A	N/A
PHROG	UHGV-1485278_14	phrog_172	99.7	3.6e-29	head scaffolding protein	head and packaging
UniRef90	UHGV-1485278_14	UniRef90_O34060	317.0	0	ORF29	N/A
eggNOG-mapper	UHGV-1485278_14	1123315.AUIP01000003_gene242	118.0	1.01e-30	N/A	N/A
Pfam	UHGV-1485278_14	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-1485278_14	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-1485278_15	phrog_909	94.6	7.1e-28	major head protein	head and packaging
UniRef90	UHGV-1485278_15	UniRef90_O80169	221.0	0	Gp119	N/A
eggNOG-mapper	UHGV-1485278_15	1123302.KB904182_gene70	91.3	4.36e-22	N/A	N/A
structural_annotation	UHGV-1485278_15	PF02924	N/A	N/A	N/A	N/A
PHROG	UHGV-1485278_16	phrog_29	263.9	0	major head protein	head and packaging
UniRef90	UHGV-1485278_16	UniRef90_O34062	639.0	0	ORF31	N/A
eggNOG-mapper	UHGV-1485278_16	682370.C9W9H9_9CAUD	662.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-1485278_16	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-1485278_16	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1485278_17	phrog_5279	93.3	1.1e-27	N/A	unknown function
UniRef90	UHGV-1485278_17	UniRef90_O34063	86.7	1.87e-21	ORF32	N/A
PHROG	UHGV-1485278_18	phrog_132	92.1	4.2e-27	head-tail adaptor	connector
UniRef90	UHGV-1485278_18	UniRef90_O34064	216.0	0	ORF33	N/A
eggNOG-mapper	UHGV-1485278_18	1123302.KB904182_gene68	156.0	0	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-1485278_18	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-1485278_18	PF05135	N/A	N/A	N/A	N/A
PHROG	UHGV-1485278_19	phrog_348	93.3	1.9e-27	minor head protein	head and packaging
UniRef90	UHGV-1485278_19	UniRef90_O34065	179.0	0	ORF34	N/A
eggNOG-mapper	UHGV-1485278_19	1605.Lani381_0863	53.1	0.000000113	N/A	N/A
structural_annotation	UHGV-1485278_19	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1485278_20	phrog_5	69.6	6.8e-20	tail completion or Neck1 protein	connector
UniRef90	UHGV-1485278_20	UniRef90_B0YL64	190.0	0	Orf14	N/A
eggNOG-mapper	UHGV-1485278_20	682370.C9W9I3_9CAUD	193.0	0	exonuclease activity	N/A
NCBIFam	UHGV-1485278_20	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-1485278_20	PF05069,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-1485278_21	phrog_176	108.2	5.4e-32	tail terminator	connector
UniRef90	UHGV-1485278_21	UniRef90_O34067	241.0	0	ORF36	N/A
eggNOG-mapper	UHGV-1485278_21	682370.C9W9I4_9CAUD	257.0	0	N/A	N/A
structural_annotation	UHGV-1485278_21	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-1485278_22	phrog_238	173.8	0	major tail protein	tail
UniRef90	UHGV-1485278_22	UniRef90_O34068	294.0	0	ORF37	N/A
eggNOG-mapper	UHGV-1485278_22	1385385.U6E9D4_9CAUD	313.0	0	Phage major tail protein 2	N/A
Pfam	UHGV-1485278_22	PF06199	N/A	N/A	Phage tail tube protein	Phage_tail_2
NCBIFam	UHGV-1485278_22	TIGR02126.1	N/A	N/A	phage major tail protein, TP901-1 family	N/A
structural_annotation	UHGV-1485278_22	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1485278_23	phrog_183	91.0	1.3e-26	tail chaperone protein	tail
UniRef90	UHGV-1485278_23	UniRef90_UPI0015D30B22	210.0	0	tail assembly chaperone	N/A
eggNOG-mapper	UHGV-1485278_23	682370.C9W9I6_9CAUD	225.0	0	Pfam:Phage_TAC_12	N/A
Pfam	UHGV-1485278_23	PF12363	N/A	N/A	Phage tail assembly chaperone protein, TAC	Phage_TAC_12
structural_annotation	UHGV-1485278_23	PF12363	N/A	N/A	N/A	N/A
PHROG	UHGV-1485278_24	phrog_1204	1109.6	0	tail protein	tail
UniRef90	UHGV-1485278_24	UniRef90_A0A3G8FBH5	1271.0	0	TMP_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1485278_24	85154.O34071_BPO12	1188.0	0	peptidoglycan catabolic process	N/A
Pfam	UHGV-1485278_24	PF20155	N/A	N/A	Tape measure protein	TMP_3
Pfam	UHGV-1485278_24	PF04513	N/A	N/A	Baculovirus polyhedron envelope protein, PEP, C terminus	Baculo_PEP_C
NCBIFam	UHGV-1485278_24	TIGR02675.1	N/A	N/A	tape measure protein	N/A
PHROG	UHGV-1485278_25	phrog_202	421.3	0	distal tail protein Dit	tail
UniRef90	UHGV-1485278_25	UniRef90_W6LLH2	1016.0	0	Phage capsid and scaffold protein	N/A
eggNOG-mapper	UHGV-1485278_25	78541.O80180_9CAUD	595.0	0	Phage tail protein	N/A
Pfam	UHGV-1485278_25	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
NCBIFam	UHGV-1485278_25	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
structural_annotation	UHGV-1485278_25	PF05709,PF21708,TIGR01633,NF041449,COG4722,COG3506	N/A	N/A	N/A	N/A
PHROG	UHGV-1485278_26	phrog_588	818.9	0	tail fiber protein and host specificity	tail
UniRef90	UHGV-1485278_26	UniRef90_A0A3G6K1M8	1654.0	0	Capsid and scaffold	N/A
eggNOG-mapper	UHGV-1485278_26	306323.Q56S86_9CAUD	1483.0	0	peptidoglycan catabolic process	N/A
Pfam	UHGV-1485278_26	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-1485278_26	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
structural_annotation	UHGV-1485278_26	PF14594,PF19081,TIGR01665,TIGR04488,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1485278_27	phrog_372	703.5	0	tail protein	tail
UniRef90	UHGV-1485278_27	UniRef90_A0A286QP34	1260.0	0	Baseplate component	N/A
eggNOG-mapper	UHGV-1485278_27	682370.C9W9J1_9CAUD	1124.0	0	N-acetylmuramoyl-L-alanine amidase activity	N/A
Pfam	UHGV-1485278_27	PF05895	N/A	N/A	N/A	DUF859
structural_annotation	UHGV-1485278_27	PF05895,MF_04116,NF010681,COG3291	N/A	N/A	N/A	N/A
PHROG	UHGV-1485278_28	phrog_1060	184.4	0	N/A	unknown function
UniRef90	UHGV-1485278_28	UniRef90_O64297	209.0	0	Orf131 gp	N/A
Pfam	UHGV-1485278_28	PF07104	N/A	N/A	N/A	DUF1366
structural_annotation	UHGV-1485278_28	PF07104	N/A	N/A	N/A	N/A
PHROG	UHGV-1485278_29	phrog_1567	87.6	7.7e-26	N/A	unknown function
UniRef90	UHGV-1485278_29	UniRef90_Q9MCJ3	73.6	2.09e-16	ORF41	N/A
UniRef90	UHGV-1485278_30	UniRef90_O21981	94.7	2.51e-24	Holin	N/A
eggNOG-mapper	UHGV-1485278_30	1282664.H354_07765	76.6	4.58e-18	COG5546 Small integral membrane protein	N/A
Pfam	UHGV-1485278_30	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
COG	UHGV-1485278_30	COG5546	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1485278	Yes	25,376	41	67	1