vOTU vOTU-115323

vOTU: vOTU-115323

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-115323
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Choladousia → Choladousia sp902363135
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-02327 → vOTU-115323
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Choladousia
Host range breadth	Genus
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0388820
Biosample ID	N/A
Genome length (bp)	21,873 bps
CheckV completeness	56.74% (Medium-quality)
CDS count	36
CDS density	89.51%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Choladousia	Total connections	2	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Choladousia → Choladousia sp902363135	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 56.74)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0388820_1	UniRef90_A0A3R6ST41	74.7	2.32e-16	DNA-binding protein	N/A
eggNOG-mapper	UHGV-0388820_1	397290.C810_03448	66.2	0.0000000000000965	N/A	N/A
NCBIFam	UHGV-0388820_1	TIGR01764.1	N/A	N/A	excisionase family DNA-binding protein	N/A
structural_annotation	UHGV-0388820_1	PF12728,TIGR01764,COG3311	N/A	N/A	N/A	N/A
PHROG	UHGV-0388820_3	phrog_37702	45.8	0.00000000000071	N/A	unknown function
PHROG	UHGV-0388820_5	phrog_3584	135.1	5.30001e-40	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0388820_5	33035.JPJF01000138_gene3005	273.0	0	N/A	N/A
structural_annotation	UHGV-0388820_5	PF01446	N/A	N/A	N/A	N/A
KOfam	UHGV-0388820_6	K03469	47.0	0.0000000000005	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	N/A
PHROG	UHGV-0388820_6	phrog_531	60.7	2.8e-17	Rnase H	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0388820_6	UniRef90_A0A4Q7PJQ5	125.0	7.33e-34	RNase H superfamily protein	N/A
eggNOG-mapper	UHGV-0388820_6	546274.EIKCOROL_00863	58.5	0.0000000107	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids	N/A
Pfam	UHGV-0388820_6	PF00075	N/A	N/A	RNase H	RNase_H
COG	UHGV-0388820_6	COG0328	N/A	N/A	Ribonuclease HI	N/A
structural_annotation	UHGV-0388820_6	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
PHROG	UHGV-0388820_7	phrog_7566	109.7	1e-32	N/A	unknown function
eggNOG-mapper	UHGV-0388820_7	411459.RUMOBE_00948	116.0	4.64e-32	N/A	N/A
UniRef90	UHGV-0388820_10	UniRef90_A0A3A9CS51	415.0	0	Sarcolemmal membrane-associated protein	N/A
eggNOG-mapper	UHGV-0388820_10	397287.C807_03474	296.0	0	N/A	N/A
PHROG	UHGV-0388820_16	phrog_36	73.7	2.9e-21	transcriptional regulator	transcription regulation
UniRef90	UHGV-0388820_16	UniRef90_UPI001D089637	141.0	1.26001e-40	N/A	N/A
eggNOG-mapper	UHGV-0388820_16	1304866.K413DRAFT_3028	160.0	0	N/A	N/A
structural_annotation	UHGV-0388820_16	PF04545	N/A	N/A	N/A	N/A
KOfam	UHGV-0388820_17	K07474	139.3	4.19997e-41	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0388820_17	phrog_51	155.3	0	terminase small subunit	head and packaging
UniRef90	UHGV-0388820_17	UniRef90_A0A415L5B5	265.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-0388820_17	1298920.KI911353_gene4857	203.0	0	Terminase small subunit	N/A
Pfam	UHGV-0388820_17	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0388820_17	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0388820_17	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-0388820_18	K06909	83.1	3.8e-24	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0388820_18	phrog_2	70.7	3e-20	terminase large subunit	head and packaging
UniRef90	UHGV-0388820_18	UniRef90_UPI001BBD0083	845.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0388820_18	742740.HMPREF9474_03500	685.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-0388820_18	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0388820_18	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0388820_19	phrog_533	267.0	0	portal protein	head and packaging
UniRef90	UHGV-0388820_19	UniRef90_UPI001C0F908C	824.0	0	capsid protein	N/A
eggNOG-mapper	UHGV-0388820_19	1117108.PAALTS15_13582	508.0	0	N/A	N/A
structural_annotation	UHGV-0388820_19	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0388820_20	phrog_25639	130.8	2.5e-39	N/A	unknown function
eggNOG-mapper	UHGV-0388820_20	742740.HMPREF9474_03502	95.5	6.29e-25	N/A	N/A
PHROG	UHGV-0388820_21	phrog_581	261.0	0	minor head protein	head and packaging
UniRef90	UHGV-0388820_21	UniRef90_A0A373A8K2	571.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0388820_21	33035.JPJF01000093_gene2255	471.0	0	N/A	N/A
Pfam	UHGV-0388820_21	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-0388820_21	PF21814	N/A	N/A	N/A	DUF6883
COG	UHGV-0388820_21	COG5585	N/A	N/A	Putative phage head morphogenesis protein, F of phage Mu or gp7 of SPP1	N/A
structural_annotation	UHGV-0388820_21	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0388820_22	phrog_34731	61.6	1.2e-17	N/A	unknown function
eggNOG-mapper	UHGV-0388820_22	365659.smi_0098	67.4	0.0000000000000875	Cysteine-rich CPCC	N/A
structural_annotation	UHGV-0388820_22	PF02699,MF_00369,TIGR00739,COG5475	N/A	N/A	N/A	N/A
UniRef90	UHGV-0388820_23	UniRef90_A0A133NHJ0	49.7	0.00000114	Toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain protein	N/A
eggNOG-mapper	UHGV-0388820_23	663952.SDD27957_09060	48.9	0.000000385	N/A	N/A
structural_annotation	UHGV-0388820_23	PF01402,NF041793,COG4710	N/A	N/A	N/A	N/A
PHROG	UHGV-0388820_24	phrog_463	254.2	0	anti-repressor	transcription regulation
UniRef90	UHGV-0388820_24	UniRef90_UPI0015F8EBB1	268.0	0	ORF6C domain-containing protein	N/A
eggNOG-mapper	UHGV-0388820_24	596315.HMPREF0634_0237	202.0	0	BRO family, N-terminal domain protein	N/A
Pfam	UHGV-0388820_24	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-0388820_24	PF10552	N/A	N/A	ORF6C domain	ORF6C
COG	UHGV-0388820_24	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0388820_24	PF10552,PF02498,TIGR02681,COG3617	N/A	N/A	N/A	N/A
PHROG	UHGV-0388820_26	phrog_194	170.1	0	head scaffolding protein	head and packaging
UniRef90	UHGV-0388820_26	UniRef90_A0A174B6A1	254.0	0	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-0388820_26	1262449.CP6013_3198	167.0	0	Phage minor structural protein GP20	N/A
Pfam	UHGV-0388820_26	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0388820_26	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0388820_27	phrog_212	289.3	0	major head protein	head and packaging
UniRef90	UHGV-0388820_27	UniRef90_A0A416Q289	561.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0388820_27	1151292.QEW_2433	507.0	0	N/A	N/A
structural_annotation	UHGV-0388820_27	PF05065,MF_04119,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0388820_28	phrog_15682	60.6	2.3e-17	N/A	unknown function
UniRef90	UHGV-0388820_28	UniRef90_A0A841L8S8	66.6	0.00000000000128	Rho_N domain-containing protein	N/A
eggNOG-mapper	UHGV-0388820_28	1408823.AXUS01000024_gene2717	64.7	0.000000000000731	N/A	N/A
PHROG	UHGV-0388820_29	phrog_541	79.2	4.5e-23	head-tail adaptor	connector
eggNOG-mapper	UHGV-0388820_29	33035.JPJF01000093_gene2250	197.0	0	N/A	N/A
PHROG	UHGV-0388820_30	phrog_556	53.3	0.0000000000000049	minor head protein	head and packaging
eggNOG-mapper	UHGV-0388820_30	742740.HMPREF9474_03509	174.0	0	N/A	N/A
PHROG	UHGV-0388820_31	phrog_2595	83.4	2.2e-24	head-tail connector protein	connector
UniRef90	UHGV-0388820_31	UniRef90_UPI001C00BA9C	187.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0388820_31	679192.HMPREF9013_1297	106.0	1.13e-27	N/A	N/A
Pfam	UHGV-0388820_31	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-0388820_31	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-0388820_32	phrog_820	119.6	1.7e-35	major tail protein	tail
eggNOG-mapper	UHGV-0388820_32	1282664.H354_06691	202.0	0	N/A	N/A
structural_annotation	UHGV-0388820_32	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0388820_33	phrog_8300	87.6	1.1e-25	N/A	unknown function
eggNOG-mapper	UHGV-0388820_33	742740.HMPREF9474_03512	114.0	6.61e-32	N/A	N/A
structural_annotation	UHGV-0388820_33	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0388820_34	phrog_8355	100.7	5.3e-30	N/A	unknown function
UniRef90	UHGV-0388820_34	UniRef90_UPI001C031F13	119.0	2.55e-33	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0388820_34	33035.JPJF01000093_gene2244	96.3	3.43e-25	N/A	N/A
PHROG	UHGV-0388820_35	phrog_1535	255.4	0	tail length tape measure protein	tail
UniRef90	UHGV-0388820_35	UniRef90_A0A1C5PIN9	953.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0388820_35	33035.JPJF01000093_gene2243	599.0	0	phage tail tape measure protein	N/A
COG	UHGV-0388820_35	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0388820_35	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0388820_36	phrog_1194	62.2	8e-18	N/A	unknown function
eggNOG-mapper	UHGV-0388820_36	33035.JPJF01000093_gene2242	149.0	8.40779e-45	N/A	N/A
structural_annotation	UHGV-0388820_36	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0388820	Yes	21,873	49	57	1