vOTU vOTU-115494

vOTU: vOTU-115494

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-115494
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00474 → vGENUS-04024 → vOTU-115494
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → F23-B02 → F23-B02 sp900556535
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1499921
Biosample ID	N/A
Genome length (bp)	33,496 bps
CheckV completeness	77.45% (Medium-quality)
CDS count	49
CDS density	93.54%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → F23-B02 → F23-B02 sp900556535	Total connections	33	Host agreement	75.76
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 77.45)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1499921_1	K07273	179.7	0	acm; lysozyme	N/A
PHROG	UHGV-1499921_1	phrog_291	129.3	3.1e-38	endolysin	lysis
UniRef90	UHGV-1499921_1	UniRef90_R5D8C8	306.0	0	Putative endolysin	N/A
eggNOG-mapper	UHGV-1499921_1	877414.ATWA01000003_gene387	201.0	0	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-1499921_1	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-1499921_1	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
KOfam	UHGV-1499921_2	K14059	148.0	9.80909e-44	int; integrase	N/A
PHROG	UHGV-1499921_2	phrog_1	147.6	9.3887e-44	integrase	integration and excision
UniRef90	UHGV-1499921_2	UniRef90_R6I1Y0	338.0	0	Site-specific recombinase XerD	N/A
eggNOG-mapper	UHGV-1499921_2	1514668.JOOA01000001_gene242	142.0	1.53e-36	Phage integrase family	N/A
Pfam	UHGV-1499921_2	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1499921_2	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1499921_2	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
COG	UHGV-1499921_3	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1499921_3	PF13443,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1499921_5	1392493.JIAB01000001_gene1404	57.4	0.0000000113	repeat protein	N/A
COG	UHGV-1499921_5	COG5263	N/A	N/A	Glucan-binding domain (YG repeat)	N/A
UniRef90	UHGV-1499921_8	UniRef90_UPI001966F1BB	80.9	1.41e-16	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-1499921_8	1226322.HMPREF1545_00148	70.5	0.00000000000014	Transcriptional	N/A
Pfam	UHGV-1499921_8	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1499921_8	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1499921_8	PF01381,NF041951,COG3655	N/A	N/A	N/A	N/A
UniRef90	UHGV-1499921_9	UniRef90_UPI0018995761	74.7	3.1e-16	helix-turn-helix transcriptional regulator	N/A
Pfam	UHGV-1499921_9	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1499921_9	PF10078,NF040507,COG3655	N/A	N/A	N/A	N/A
Pfam	UHGV-1499921_10	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1499921_10	PF21291,TIGR03070,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-1499921_12	phrog_253	103.7	1.8e-30	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1499921_12	UniRef90_A0A1C5N4H2	113.0	5.17e-29	Siphovirus Gp157	N/A
eggNOG-mapper	UHGV-1499921_12	1410670.JHXF01000015_gene2268	91.7	2.62e-21	Siphovirus Gp157	N/A
Pfam	UHGV-1499921_12	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-1499921_12	PF05565	N/A	N/A	N/A	N/A
PHROG	UHGV-1499921_13	phrog_7838	138.1	6.40001e-41	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1499921_13	UniRef90_A0A8D9UGW3	184.0	0	DNA repair protein RAD52-like protein	N/A
eggNOG-mapper	UHGV-1499921_13	742767.HMPREF9456_02052	154.0	2.52234e-44	N/A	N/A
structural_annotation	UHGV-1499921_13	PF04098,TIGR00607,COG4380	N/A	N/A	N/A	N/A
PHROG	UHGV-1499921_14	phrog_72	56.7	2.9e-16	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1499921_14	UniRef90_A0A8D9PDS2	135.0	3.54e-37	NinB protein	N/A
eggNOG-mapper	UHGV-1499921_14	445972.ANACOL_01825	114.0	1.48e-29	N/A	N/A
structural_annotation	UHGV-1499921_14	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-1499921_15	phrog_7566	92.7	2.2e-27	N/A	unknown function
eggNOG-mapper	UHGV-1499921_15	508419.F8J187_9CAUD	112.0	2.93e-31	N/A	N/A
KOfam	UHGV-1499921_16	K03111	136.1	3.8e-40	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1499921_16	phrog_44	136.0	2.4e-40	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1499921_16	UniRef90_R6IDK3	181.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1499921_16	1007096.BAGW01000023_gene151	159.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-1499921_16	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1499921_16	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1499921_16	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1499921_16	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1499921_16	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1499921_17	phrog_16304	114.6	1e-33	N/A	unknown function
UniRef90	UHGV-1499921_17	UniRef90_A0A810PZI8	213.0	0	N/A	N/A
eggNOG-mapper	UHGV-1499921_17	927704.SELR_18440	89.0	1.88e-18	N-terminal phage replisome organiser (Phage_rep_org_N)	N/A
Pfam	UHGV-1499921_17	PF19808	N/A	N/A	N/A	DUF6291
COG	UHGV-1499921_17	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1499921_17	PF19808	N/A	N/A	N/A	N/A
PHROG	UHGV-1499921_18	phrog_9804	128.6	4.4e-38	N/A	unknown function
UniRef90	UHGV-1499921_18	UniRef90_A0A1C5T9U7	164.0	0	Loader and inhibitor of phage G40P	N/A
eggNOG-mapper	UHGV-1499921_18	585394.RHOM_14005	128.0	6.39e-35	Loader and inhibitor of phage G40P	N/A
AcrCatalog	UHGV-1499921_18	cluster_137185	113.0	4.82e-34	NA	N/A
Pfam	UHGV-1499921_18	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-1499921_18	PF11417	N/A	N/A	N/A	N/A
dbAPIS	UHGV-1499921_19	APIS008	N/A	N/A	Alphafold2 predicted that Gad2 is an enzyme with a nucleotidyltransferase protein domain, suggesting that it inhibits Gabija via a mechanism of action different than Gad1.	N/A
KOfam	UHGV-1499921_20	K01449	52.4	0.0000000000000084	cwlJ, sleB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1499921_20	phrog_30550	139.6	1.10002e-41	N/A	unknown function
UniRef90	UHGV-1499921_20	UniRef90_R6CIF0	120.0	1.06e-31	Hydrolase_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1499921_20	1519439.JPJG01000077_gene920	107.0	5.89e-28	Cell Wall Hydrolase	N/A
Pfam	UHGV-1499921_20	PF07486	N/A	N/A	Cell Wall Hydrolase	Hydrolase_2
structural_annotation	UHGV-1499921_20	PF07486,TIGR02869,COG3773	N/A	N/A	N/A	N/A
KOfam	UHGV-1499921_21	K00571	116.2	3.7e-34	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-1499921_21	phrog_67	96.4	1e-28	DNA methyltransferase	other
UniRef90	UHGV-1499921_21	UniRef90_A0A2U1CFM2	422.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-1499921_21	411468.CLOSCI_00299	368.0	0	DNA methylase	N/A
PADLOC	UHGV-1499921_21	MTase_II_00157	93.1	4e-27	Type II methyltransferase	RM
Pfam	UHGV-1499921_21	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-1499921_21	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-1499921_21	PF01555,MF_01872,NF010253,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-1499921_22	phrog_799	187.2	0	DNA methyltransferase	other
UniRef90	UHGV-1499921_22	UniRef90_A0A414ZQZ4	281.0	0	NAD(P)-dependent oxidoreductase	N/A
eggNOG-mapper	UHGV-1499921_22	1123263.AUKY01000096_gene1823	240.0	0	DNA restriction-modification system	N/A
COG	UHGV-1499921_22	COG0827	N/A	N/A	Adenine-specific DNA N6-methylase	N/A
structural_annotation	UHGV-1499921_22	PF19587,MF_01872,NF011489,COG0286	N/A	N/A	N/A	N/A
PHROG	UHGV-1499921_23	phrog_757	219.2	0	DNA methyltransferase	other
UniRef90	UHGV-1499921_23	UniRef90_UPI0006A41431	248.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-1499921_23	1235790.C805_00032	218.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-1499921_23	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1499921_23	PF00145,MF_01872,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-1499921_24	phrog_1384	130.5	1.1e-38	Mom-like DNA modification protein	other
eggNOG-mapper	UHGV-1499921_24	428125.CLOLEP_01816	271.0	0	COG NOG12663 non supervised orthologous group	N/A
structural_annotation	UHGV-1499921_24	PF11124,MF_02210,NF040502,COG3818	N/A	N/A	N/A	N/A
PHROG	UHGV-1499921_30	phrog_3377	182.5	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1499921_30	UniRef90_A0A3Q9RLP4	140.0	1.51e-38	Deoxyuridine 5'-triphosphate nucleotidohydrolase family protein	N/A
eggNOG-mapper	UHGV-1499921_30	1283338.Q4Z920_BPTWO	136.0	8.05e-39	hydrolase activity	N/A
PHROG	UHGV-1499921_34	phrog_2245	90.7	1.6e-26	nucleoside triphosphate pyrophosphohydrolase	other
UniRef90	UHGV-1499921_34	UniRef90_A0A4U9RLZ8	80.9	4.46e-18	N/A	N/A
eggNOG-mapper	UHGV-1499921_34	428125.CLOLEP_01814	97.1	1.08e-24	COG NOG14118 non supervised orthologous group	N/A
structural_annotation	UHGV-1499921_34	PF12643,MF_01020,TIGR03188	N/A	N/A	N/A	N/A
PHROG	UHGV-1499921_35	phrog_23747	63.1	5.3e-18	N/A	unknown function
structural_annotation	UHGV-1499921_35	NF040944	N/A	N/A	N/A	N/A
COG	UHGV-1499921_38	COG5484	N/A	N/A	N/A	N/A
KOfam	UHGV-1499921_39	K06909	147.6	9.94922e-44	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1499921_39	phrog_979	148.7	1.4013e-45	terminase large subunit	head and packaging
UniRef90	UHGV-1499921_39	UniRef90_A0A3C0NMI6	600.0	0	Terminase-like family protein	N/A
eggNOG-mapper	UHGV-1499921_39	1410650.JHWL01000003_gene2834	536.0	0	N/A	N/A
Pfam	UHGV-1499921_39	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-1499921_39	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1499921_39	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1499921_40	phrog_156	269.7	0	portal protein	head and packaging
eggNOG-mapper	UHGV-1499921_40	1410650.JHWL01000003_gene2833	504.0	0	N/A	N/A
structural_annotation	UHGV-1499921_40	PF16510,MF_04120,TIGR01538,COG4383	N/A	N/A	N/A	N/A
KOfam	UHGV-1499921_41	K07584	52.9	0.0000000000000071	N/A	N/A
PHROG	UHGV-1499921_41	phrog_4478	56.7	3.1e-16	peptidase	other
UniRef90	UHGV-1499921_41	UniRef90_A0A3E2SWY9	55.8	0.0000000591	Ribosomal-processing cysteine protease Prp	N/A
eggNOG-mapper	UHGV-1499921_41	748224.HMPREF9436_01398	59.3	0.00000000674	Cysteine protease Prp	N/A
Pfam	UHGV-1499921_41	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
COG	UHGV-1499921_41	COG2868	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1499921_41	PF04327,NF011124,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-1499921_42	phrog_13908	173.9	0	N/A	unknown function
eggNOG-mapper	UHGV-1499921_42	1321782.HMPREF1986_00346	66.6	0.00000000143	N/A	N/A
PHROG	UHGV-1499921_43	phrog_1357	192.2	0	major head protein	head and packaging
UniRef90	UHGV-1499921_43	UniRef90_A0A2V2CFL5	543.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-1499921_43	1410650.JHWL01000003_gene2830	258.0	0	N/A	N/A
NCBIFam	UHGV-1499921_43	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-1499921_43	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1499921_45	phrog_12105	108.6	4e-32	N/A	unknown function
eggNOG-mapper	UHGV-1499921_45	1519439.JPJG01000060_gene1891	76.6	2.7e-16	N/A	N/A
PHROG	UHGV-1499921_46	phrog_511	214.7	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-1499921_46	1410650.JHWL01000003_gene2827	288.0	0	N/A	N/A
structural_annotation	UHGV-1499921_46	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1499921_48	1410650.JHWL01000003_gene2815	112.0	1.18e-24	N/A	N/A
PHROG	UHGV-1499921_49	phrog_22978	331.8	0	N/A	unknown function
eggNOG-mapper	UHGV-1499921_49	1321782.HMPREF1986_00356	242.0	0	N/A	N/A
Pfam	UHGV-1499921_49	PF18819	N/A	N/A	Phage MuF-C-terminal domain	MuF_C
Pfam	UHGV-1499921_49	PF18814	N/A	N/A	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease5	PBECR5
structural_annotation	UHGV-1499921_49	PF18814	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1499921	Yes	33,496	52	77	1