vOTU vOTU-115562

vOTU: vOTU-115562

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-115562
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00367 → vGENUS-21969 → vOTU-115562
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Flavonifractor → Flavonifractor plautii
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1468366
Biosample ID	N/A
Genome length (bp)	21,386 bps
CheckV completeness	52.28% (Medium-quality)
CDS count	37
CDS density	92.14%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Flavonifractor → Flavonifractor plautii	Total connections	249	Host agreement	97.59
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Flavonifractor → Flavonifractor plautii	Total connections	35	Host agreement	80

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 52.28)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1468366_1	phrog_1029	51.3	0.000000000000014	N/A	unknown function
PHROG	UHGV-1468366_2	phrog_997	102.5	3.1e-30	replication terminator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1468366_2	UniRef90_R6MCS9	115.0	5.88e-31	N/A	N/A
eggNOG-mapper	UHGV-1468366_2	1519439.JPJG01000059_gene1910	134.0	5.81e-39	N/A	N/A
UniRef90	UHGV-1468366_5	UniRef90_A0A173Y4X9	108.0	6.47e-29	DNA binding domain, excisionase family	N/A
Pfam	UHGV-1468366_5	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
NCBIFam	UHGV-1468366_5	TIGR01764.1	N/A	N/A	excisionase family DNA-binding protein	N/A
COG	UHGV-1468366_5	COG3311	N/A	N/A	DNA-binding transcriptional regulator AlpA	N/A
UniRef90	UHGV-1468366_6	UniRef90_UPI0012AC17D6	130.0	2.23e-38	helix-turn-helix domain-containing protein	N/A
structural_annotation	UHGV-1468366_6	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1468366_7	PF11614,TIGR02588,COG2847	N/A	N/A	N/A	N/A
PHROG	UHGV-1468366_8	phrog_8	58.5	1.5e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-1468366_8	UniRef90_UPI0018AA2C84	239.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1468366_8	1507.HMPREF0262_00424	107.0	8.89e-29	Cro/C1-type HTH DNA-binding domain	N/A
COG	UHGV-1468366_8	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
PHROG	UHGV-1468366_9	phrog_87	70.3	2e-20	metallo-protease	other
UniRef90	UHGV-1468366_9	UniRef90_UPI001899699D	172.0	0	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-1468366_9	1007096.BAGW01000011_gene2354	157.0	0	IrrE N-terminal-like domain	N/A
COG	UHGV-1468366_9	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-1468366_9	PF06114,COG2856	N/A	N/A	N/A	N/A
PHROG	UHGV-1468366_10	phrog_9605	400.7	0	N/A	unknown function
UniRef90	UHGV-1468366_10	UniRef90_A0A1C7FRW2	657.0	0	N/A	N/A
eggNOG-mapper	UHGV-1468366_10	1410628.JNKS01000004_gene2023	421.0	0	N/A	N/A
Pfam	UHGV-1468366_10	PF12358	N/A	N/A	N/A	DUF3644
Pfam	UHGV-1468366_10	PF18740	N/A	N/A	EC042_2821-like Restriction Endonuclease-like domain	EC042_2821
KOfam	UHGV-1468366_11	K14059	226.6	0	int; integrase	N/A
PHROG	UHGV-1468366_11	phrog_1	204.6	0	integrase	integration and excision
UniRef90	UHGV-1468366_11	UniRef90_H1C924	759.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-1468366_11	742738.HMPREF9460_04031	278.0	0	Phage integrase family	N/A
Pfam	UHGV-1468366_11	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-1468366_11	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1468366_11	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1468366_11	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1468366_13	1226322.HMPREF1545_00079	143.0	8.16957e-43	N/A	N/A
eggNOG-mapper	UHGV-1468366_14	476272.RUMHYD_01772	52.0	0.0000031	N/A	N/A
PHROG	UHGV-1468366_15	phrog_20016	227.2	0	N/A	unknown function
UniRef90	UHGV-1468366_15	UniRef90_A0A285PT46	184.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-1468366_15	1226322.HMPREF1545_00077	236.0	0	N/A	N/A
structural_annotation	UHGV-1468366_15	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-1468366_16	phrog_16490	294.6	0	N/A	unknown function
eggNOG-mapper	UHGV-1468366_16	1226322.HMPREF1545_00076	242.0	0	N/A	N/A
PHROG	UHGV-1468366_17	phrog_22984	114.1	5.1e-34	N/A	unknown function
PHROG	UHGV-1468366_18	phrog_21718	122.6	2.4e-36	N/A	unknown function
eggNOG-mapper	UHGV-1468366_18	397290.C810_05210	73.6	0.000000000000029	N/A	N/A
PHROG	UHGV-1468366_19	phrog_3754	93.5	2.2e-27	N/A	unknown function
eggNOG-mapper	UHGV-1468366_19	476272.RUMHYD_01764	163.0	0	N/A	N/A
structural_annotation	UHGV-1468366_21	PF16509,MF_00245,NF001066,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-1468366_22	phrog_4105	74.7	8.7e-22	N/A	unknown function
eggNOG-mapper	UHGV-1468366_22	537013.CLOSTMETH_01753	76.6	9.36e-17	N/A	N/A
PHROG	UHGV-1468366_23	phrog_1129	78.3	5.7e-23	holin	lysis
UniRef90	UHGV-1468366_23	UniRef90_A0A1C7FPV3	166.0	0	Enolase	N/A
eggNOG-mapper	UHGV-1468366_23	1226322.HMPREF1545_00069	141.0	8.89825e-43	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-1468366_23	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1468366_23	PF06946	N/A	N/A	N/A	N/A
KOfam	UHGV-1468366_24	K01448	181.5	0	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1468366_24	phrog_18955	388.1	0	N/A	unknown function
UniRef90	UHGV-1468366_24	UniRef90_A0A1C7FQI4	790.0	0	MurNAc-LAA domain-containing protein	N/A
eggNOG-mapper	UHGV-1468366_24	1226322.HMPREF1545_00782	259.0	0	N/A	N/A
Pfam	UHGV-1468366_24	PF09992	N/A	N/A	Phosphodiester glycosidase	NAGPA
Pfam	UHGV-1468366_24	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-1468366_24	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-1468366_24	PF01520,PF09992,MF_00417,TIGR02883,COG0860,COG4632	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1468366_25	742738.HMPREF9460_03967	224.0	0	N/A	N/A
PHROG	UHGV-1468366_27	phrog_2310	55.9	4e-16	N/A	unknown function
UniRef90	UHGV-1468366_28	UniRef90_UPI0019591B61	52.4	0.00000101	toxin-antitoxin system toxin subunit	N/A
PHROG	UHGV-1468366_29	phrog_2295	42.0	0.0000000000016	N/A	unknown function
Pfam	UHGV-1468366_29	PF21722	N/A	N/A	Glycine-rich domain	Gly_rich_2
structural_annotation	UHGV-1468366_29	PF21722	N/A	N/A	N/A	N/A
PHROG	UHGV-1468366_30	phrog_11157	341.5	0	N/A	unknown function
UniRef90	UHGV-1468366_30	UniRef90_G9YSD2	741.0	0	Big_13 domain-containing protein	N/A
eggNOG-mapper	UHGV-1468366_30	1235797.C816_02657	243.0	0	N/A	N/A
Pfam	UHGV-1468366_30	PF19077	N/A	N/A	Bacterial Ig-like domain	Big_13
Pfam	UHGV-1468366_30	PF09136	N/A	N/A	Glucodextranase, domain B	Glucodextran_B
COG	UHGV-1468366_30	COG3292	N/A	N/A	Periplasmic ligand-binding sensor domain	N/A
structural_annotation	UHGV-1468366_30	PF09136,PF13750,MF_04116,NF032891,COG2372	N/A	N/A	N/A	N/A
PHROG	UHGV-1468366_32	phrog_13879	601.6	0	N/A	unknown function
eggNOG-mapper	UHGV-1468366_32	1235797.C816_02659	680.0	0	N/A	N/A
structural_annotation	UHGV-1468366_32	PF14594,PF06588,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1468366_33	1235797.C816_02660	53.9	0.00000032	N/A	N/A
structural_annotation	UHGV-1468366_33	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1468366_34	phrog_23464	270.7	0	N/A	unknown function
eggNOG-mapper	UHGV-1468366_34	665950.HMPREF1025_02660	328.0	0	phage tail tape measure protein	N/A
COG	UHGV-1468366_34	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-1468366_34	PF20155	N/A	N/A	N/A	N/A
PHROG	UHGV-1468366_36	phrog_18646	69.7	3.6e-20	N/A	unknown function
UniRef90	UHGV-1468366_36	UniRef90_B6CXF0	80.9	2.57e-17	Peptidase-colicin	N/A
PHROG	UHGV-1468366_37	phrog_885	93.4	1.8e-27	major tail protein	tail
eggNOG-mapper	UHGV-1468366_37	1111121.HMPREF1247_0789	181.0	0	N/A	N/A
structural_annotation	UHGV-1468366_37	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1468366	Yes	21,386	54	52	1