vOTU vOTU-116314

vOTU: vOTU-116314

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-116314
Number of genomes	2
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83 → CAG-83 sp000435555
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00005 → vGENUS-00181 → vOTU-116314
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae
Host range breadth	Family
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0416314
Biosample ID	N/A
Genome length (bp)	30,374 bps
CheckV completeness	72.26% (Medium-quality)
CDS count	50
CDS density	96.73%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae	Total connections	153	Host agreement	91.5
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83 → CAG-83 sp000435555	Total connections	4	Host agreement	75

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 72.26)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0416314_1	UniRef90_A0A8D9UHD8	275.0	0	mRNA splicing protein	N/A
PHROG	UHGV-0416314_3	phrog_18725	73.6	1.3e-21	N/A	unknown function
eggNOG-mapper	UHGV-0416314_3	1235797.C816_02657	73.6	0.00000000000204	N/A	N/A
COG	UHGV-0416314_3	COG3292	N/A	N/A	Periplasmic ligand-binding sensor domain	N/A
structural_annotation	UHGV-0416314_3	PF13754,COG2372	N/A	N/A	N/A	N/A
KOfam	UHGV-0416314_4	K01361	61.5	5.8e-18	E3.4.21.96; lactocepin [EC:3.4.21.96]	N/A
PHROG	UHGV-0416314_4	phrog_11157	227.4	0	N/A	unknown function
UniRef90	UHGV-0416314_4	UniRef90_UPI001C10C6DC	390.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0416314_4	1256908.HMPREF0373_00674	298.0	0	N/A	N/A
Pfam	UHGV-0416314_4	PF19077	N/A	N/A	Bacterial Ig-like domain	Big_13
Pfam	UHGV-0416314_4	PF09136	N/A	N/A	Glucodextranase, domain B	Glucodextran_B
COG	UHGV-0416314_4	COG3292	N/A	N/A	Periplasmic ligand-binding sensor domain	N/A
structural_annotation	UHGV-0416314_4	PF09136,PF13205,PF13754,MF_04116,NF032891,COG2372,COG5456	N/A	N/A	N/A	N/A
PHROG	UHGV-0416314_6	phrog_13879	250.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0416314_6	1226322.HMPREF1545_00061	494.0	0	N/A	N/A
structural_annotation	UHGV-0416314_6	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-0416314_7	phrog_1194	60.3	3.1e-17	N/A	unknown function
eggNOG-mapper	UHGV-0416314_7	1226322.HMPREF1545_00060	238.0	0	N/A	N/A
structural_annotation	UHGV-0416314_7	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0416314_8	phrog_1535	84.2	1.6e-38	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0416314_8	693746.OBV_18190	367.0	0	domain protein	N/A
COG	UHGV-0416314_8	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0416314_8	PF05546,TIGR02559	N/A	N/A	N/A	N/A
KOfam	UHGV-0416314_9	K07448	119.7	2.1e-35	mrr; restriction system protein	N/A
PHROG	UHGV-0416314_9	phrog_19856	48.1	0.00000000000011	N/A	unknown function
UniRef90	UHGV-0416314_9	UniRef90_A0A417P7U8	150.0	2.15e-39	Restriction endonuclease	N/A
eggNOG-mapper	UHGV-0416314_9	1235790.C805_00010	162.0	1.4013e-45	Restriction endonuclease	N/A
PADLOC	UHGV-0416314_9	ZorD1_00005	67.9	1.1e-19	SWI2/SNF2 helicase, Mrr-like nuclease	Zorya
Pfam	UHGV-0416314_9	PF04471	N/A	N/A	Restriction endonuclease	Mrr_cat
COG	UHGV-0416314_9	COG1787	N/A	N/A	Endonuclease, HJR/Mrr/RecB family	N/A
structural_annotation	UHGV-0416314_9	PF04471,MF_00584,NF040854,COG1787	N/A	N/A	N/A	N/A
PHROG	UHGV-0416314_10	phrog_706	127.3	1e-37	N/A	unknown function
UniRef90	UHGV-0416314_10	UniRef90_UPI000682A80B	214.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0416314_10	693746.OBV_18170	206.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0416314_10	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0416314_10	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0416314_11	phrog_11299	82.2	6.7e-24	N/A	unknown function
eggNOG-mapper	UHGV-0416314_11	693746.OBV_18160	194.0	0	N/A	N/A
structural_annotation	UHGV-0416314_11	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0416314_12	phrog_3099	90.3	2.4e-26	N/A	unknown function
eggNOG-mapper	UHGV-0416314_12	1226322.HMPREF1545_00056	244.0	0	N/A	N/A
structural_annotation	UHGV-0416314_12	TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-0416314_13	phrog_3266	59.8	4.2e-17	tail completion	connector
UniRef90	UHGV-0416314_13	UniRef90_A0A2Z4QA01	120.0	2.02e-32	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0416314_13	1232443.BAIA02000078_gene24	183.0	0	N/A	N/A
structural_annotation	UHGV-0416314_13	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0416314_14	phrog_556	79.3	3.9e-23	minor head protein	head and packaging
UniRef90	UHGV-0416314_14	UniRef90_UPI00195E1497	187.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0416314_14	1226322.HMPREF1545_00054	157.0	0	Minor capsid protein	N/A
Pfam	UHGV-0416314_14	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0416314_14	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0416314_15	phrog_3366	91.4	9.3e-27	N/A	unknown function
eggNOG-mapper	UHGV-0416314_15	1226322.HMPREF1545_00053	154.0	0	N/A	N/A
structural_annotation	UHGV-0416314_15	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-0416314_16	phrog_541	106.9	1.2e-31	head-tail adaptor	connector
eggNOG-mapper	UHGV-0416314_16	642492.Clole_0822	68.2	0.00000000000101	N/A	N/A
PHROG	UHGV-0416314_17	phrog_544	190.6	0	major head protein	head and packaging
UniRef90	UHGV-0416314_17	UniRef90_A0A810PZM2	500.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0416314_17	1347392.CCEZ01000005_gene1236	290.0	0	N/A	N/A
structural_annotation	UHGV-0416314_17	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0416314_18	PF06810	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0416314_19	PF18152	N/A	N/A	N/A	N/A
PHROG	UHGV-0416314_20	phrog_581	276.3	0	minor head protein	head and packaging
UniRef90	UHGV-0416314_20	UniRef90_A0A1C5N7V1	493.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-0416314_20	1226322.HMPREF1545_00046	321.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0416314_20	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0416314_20	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0416314_20	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0416314_21	phrog_533	387.9	0	portal protein	head and packaging
UniRef90	UHGV-0416314_21	UniRef90_A0A1C5N775	596.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-0416314_21	1226322.HMPREF1545_00044	543.0	0	N/A	N/A
Pfam	UHGV-0416314_21	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0416314_21	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0416314_22	K06909	113.5	2.3e-33	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0416314_22	phrog_2	119.6	4.2e-35	terminase large subunit	head and packaging
UniRef90	UHGV-0416314_22	UniRef90_A0A3D3Y0N9	422.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0416314_22	1226322.HMPREF1545_00043	392.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0416314_22	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0416314_22	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0416314_22	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0416314_22	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0416314_24	K07319	119.1	4.2e-35	yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	N/A
PHROG	UHGV-0416314_24	phrog_498	434.0	0	DNA methyltransferase	other
UniRef90	UHGV-0416314_24	UniRef90_A0A810Q3Z7	448.0	0	N6_N4_Mtase domain-containing protein	N/A
eggNOG-mapper	UHGV-0416314_24	1423758.BN55_01455	414.0	0	DNA methylase	N/A
PADLOC	UHGV-0416314_24	MTase_II_00015	241.2	0	Type II methyltransferase	RM
Pfam	UHGV-0416314_24	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
Pfam	UHGV-0416314_24	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0416314_24	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0416314_24	PF01555,PF02195,MF_02015,MF_01872,NF010253,TIGR04285,COG0863,COG1475	N/A	N/A	N/A	N/A
Pfam	UHGV-0416314_25	PF13384	N/A	N/A	Homeodomain-like domain	HTH_23
structural_annotation	UHGV-0416314_26	PF06003,MF_01354,TIGR00739,COG5475	N/A	N/A	N/A	N/A
UniRef90	UHGV-0416314_29	UniRef90_A0A8D9PDT5	72.8	0.0000000000000166	Hydrogenase/urease nickel incorporation protein	N/A
PHROG	UHGV-0416314_31	phrog_3136	138.9	1.49995e-41	N/A	unknown function
UniRef90	UHGV-0416314_31	UniRef90_A0A3D0HBD2	167.0	0	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-0416314_31	97139.C824_00742	58.5	0.0000000262	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	N/A
COG	UHGV-0416314_31	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0416314_31	PF04266,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
UniRef90	UHGV-0416314_33	UniRef90_A0A8D9PDK1	129.0	3.18e-36	Anti-repressor	N/A
KOfam	UHGV-0416314_36	K00558	43.1	0.0000000000031	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0416314_36	phrog_757	123.1	1.7e-36	DNA methyltransferase	other
UniRef90	UHGV-0416314_36	UniRef90_A0A8D9PDD1	434.0	0	DNA (Cytosine 5) methyltransferase	N/A
eggNOG-mapper	UHGV-0416314_36	622312.ROSEINA2194_01264	372.0	0	C-5 cytosine-specific DNA methylase	N/A
Pfam	UHGV-0416314_36	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-0416314_36	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0416314_36	PF00145,TIGR00675,COG0270	N/A	N/A	N/A	N/A
KOfam	UHGV-0416314_38	K00390	59.1	5.4e-18	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0416314_38	phrog_424	121.4	6.6e-36	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0416314_38	UniRef90_A0A1H7KWC5	305.0	0	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase	N/A
eggNOG-mapper	UHGV-0416314_38	665956.HMPREF1032_00140	263.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
Pfam	UHGV-0416314_38	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0416314_38	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0416314_38	PF01507,MF_00063,NF006327,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-0416314_39	phrog_190	111.1	8.7e-33	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0416314_39	UniRef90_A0A8D9PDD6	274.0	0	Endonuclease	N/A
eggNOG-mapper	UHGV-0416314_39	1226322.HMPREF1545_00295	119.0	2.42e-32	N/A	N/A
Pfam	UHGV-0416314_39	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0416314_39	PF06356	N/A	N/A	N/A	N/A
PHROG	UHGV-0416314_41	phrog_15768	109.0	2.6e-34	N/A	unknown function
UniRef90	UHGV-0416314_41	UniRef90_A0A8D9PDU3	337.0	0	N/A	N/A
eggNOG-mapper	UHGV-0416314_41	693979.Bache_0304	90.5	5.93e-20	N/A	N/A
Pfam	UHGV-0416314_41	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-0416314_41	PF19808	N/A	N/A	N/A	N/A
KOfam	UHGV-0416314_42	K03111	147.2	1.59748e-43	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0416314_42	phrog_44	143.5	1.19951e-42	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0416314_42	UniRef90_R6GTK3	201.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0416314_42	693746.OBV_19910	199.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-0416314_42	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0416314_42	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0416314_42	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0416314_42	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0416314_42	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0416314_43	phrog_7566	96.8	1.2e-28	N/A	unknown function
UniRef90	UHGV-0416314_43	UniRef90_A0A8D9UHC0	142.0	2.14959e-42	Recombination enhancement function protein nuclease	N/A
eggNOG-mapper	UHGV-0416314_43	693746.OBV_25470	109.0	8.46e-30	N/A	N/A
PHROG	UHGV-0416314_45	phrog_72	57.9	8.8e-17	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0416314_45	UniRef90_A0A8D9PDS2	339.0	0	NinB protein	N/A
eggNOG-mapper	UHGV-0416314_45	445972.ANACOL_01825	133.0	3.55e-37	N/A	N/A
structural_annotation	UHGV-0416314_45	PF05772	N/A	N/A	N/A	N/A
UniRef90	UHGV-0416314_46	UniRef90_B0PAM4	154.0	5.32493e-44	YqaJ domain-containing protein	N/A
structural_annotation	UHGV-0416314_46	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
UniRef90	UHGV-0416314_47	UniRef90_A0A845QLQ8	189.0	0	N/A	N/A
eggNOG-mapper	UHGV-0416314_47	33035.JPJF01000135_gene5082	115.0	2.03e-29	N/A	N/A
Pfam	UHGV-0416314_47	PF06378	N/A	N/A	N/A	DUF1071
structural_annotation	UHGV-0416314_47	PF06378,TIGR00607,COG5055	N/A	N/A	N/A	N/A
UniRef90	UHGV-0416314_49	UniRef90_A0A8D9UH91	328.0	0	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0416314_49	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
structural_annotation	UHGV-0416314_49	PF01381,PF21715,NF041951,TIGR04176,COG1476,COG1654	N/A	N/A	N/A	N/A
PHROG	UHGV-0416314_50	phrog_27197	63.3	6e-19	N/A	unknown function
eggNOG-mapper	UHGV-0416314_50	767434.Fraau_1460	52.4	0.00000353	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0416314_50	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-0416314_50	NF007410	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0416314	Yes	30,374	53	72	1
UHGV-1333227	No	29,612	53	70	1