vOTU vOTU-116517

vOTU: vOTU-116517

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-116517
Number of genomes	1
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-03614 → vGENUS-05480 → vOTU-116517
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → ER4 → ER4 sp000765235
Host range breadth	Species
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0039422
Biosample ID	N/A
Genome length (bp)	27,650 bps
CheckV completeness	58.94% (Medium-quality)
CDS count	44
CDS density	92.21%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → ER4 → ER4 sp000765235	Total connections	1	Host agreement	100
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 58.94)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0039422_1	phrog_30550	104.7	7.6e-31	N/A	unknown function
UniRef90	UHGV-0039422_1	UniRef90_UPI001AB026D3	82.0	0.0000000000000019	cell wall hydrolase	N/A
eggNOG-mapper	UHGV-0039422_1	1519439.JPJG01000077_gene920	76.6	0.00000000000000349	Cell Wall Hydrolase	N/A
PHROG	UHGV-0039422_2	phrog_606	76.7	2.2e-22	terminase small subunit	head and packaging
eggNOG-mapper	UHGV-0039422_2	935837.JAEK01000054_gene1463	73.2	0.000000000000163	DNA-packaging protein gp3	N/A
Pfam	UHGV-0039422_2	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
PHROG	UHGV-0039422_10	phrog_38	187.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-0039422_10	UniRef90_A0A318EQM2	429.0	0	Putative phage terminase large subunit-like protein	N/A
eggNOG-mapper	UHGV-0039422_10	1123263.AUKY01000015_gene1608	509.0	0	chromosome segregation	N/A
COG	UHGV-0039422_10	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0039422_10	PF17289,PF02562,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
PHROG	UHGV-0039422_11	phrog_64	189.6	0	portal protein	head and packaging
UniRef90	UHGV-0039422_11	UniRef90_A0A843H8C6	355.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0039422_11	1123263.AUKY01000015_gene1609	306.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0039422_11	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0039422_11	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0039422_13	phrog_247	270.2	0	major head protein	head and packaging
UniRef90	UHGV-0039422_13	UniRef90_A0A3D0LY55	414.0	0	Coat protein	N/A
eggNOG-mapper	UHGV-0039422_13	1304866.K413DRAFT_3038	315.0	0	N/A	N/A
Pfam	UHGV-0039422_13	PF20036	N/A	N/A	Major capsid protein 13-like	Gp13-like
structural_annotation	UHGV-0039422_13	PF20036,MF_04113,TIGR04387,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-0039422_15	UniRef90_A0A1V5X694	107.0	3.51e-28	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-0039422_15	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-0039422_15	TIGR01560	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0039422_16	1232453.BAIF02000058_gene1630	77.4	2.44e-16	N/A	N/A
eggNOG-mapper	UHGV-0039422_17	476272.RUMHYD_01963	93.2	1.57e-21	N/A	N/A
structural_annotation	UHGV-0039422_18	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0039422_19	1121333.JMLH01000047_gene1013	174.0	0	N/A	N/A
structural_annotation	UHGV-0039422_19	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-0039422_20	UniRef90_A0A496N7D3	112.0	5.48e-30	N/A	N/A
eggNOG-mapper	UHGV-0039422_20	1211844.CBLM010000023_gene988	74.7	6.39e-16	N/A	N/A
Pfam	UHGV-0039422_20	PF16478	N/A	N/A	N/A	DUF5055
structural_annotation	UHGV-0039422_20	PF16478	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0039422_21	1121333.JMLH01000047_gene1011	78.6	9.81e-17	N/A	N/A
PHROG	UHGV-0039422_22	phrog_1535	126.6	4.76441e-44	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0039422_22	1121866.AUGK01000003_gene1437	211.0	0	phage tail tape measure protein	N/A
COG	UHGV-0039422_22	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
PHROG	UHGV-0039422_23	phrog_1194	115.6	2.2e-34	N/A	unknown function
UniRef90	UHGV-0039422_23	UniRef90_A0A4U9RD70	107.0	9.62e-28	Lj965 prophage protein	N/A
eggNOG-mapper	UHGV-0039422_23	469596.HMPREF9488_01317	107.0	1.35e-28	N/A	N/A
Pfam	UHGV-0039422_23	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0039422_23	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0039422_24	phrog_6616	110.1	6.8e-34	tail protein	tail
eggNOG-mapper	UHGV-0039422_24	469596.HMPREF9488_01318	265.0	0	N/A	N/A
PHROG	UHGV-0039422_25	phrog_372	163.1	0	tail protein	tail
UniRef90	UHGV-0039422_25	UniRef90_UPI001373A0FD	183.0	0	N/A	N/A
eggNOG-mapper	UHGV-0039422_25	1042156.CXIVA_07170	114.0	5.11e-24	tail collar domain protein	N/A
Pfam	UHGV-0039422_25	PF05895	N/A	N/A	N/A	DUF859
COG	UHGV-0039422_25	COG4675	N/A	N/A	Phage tail collar domain	N/A
PHROG	UHGV-0039422_26	phrog_4105	53.2	0.000000000000005	N/A	unknown function
PHROG	UHGV-0039422_27	phrog_1129	65.6	5.6e-19	holin	lysis
UniRef90	UHGV-0039422_27	UniRef90_A0A810PUU2	116.0	2.87e-32	Holin	N/A
eggNOG-mapper	UHGV-0039422_27	1256908.HMPREF0373_00463	87.0	2.47e-21	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0039422_27	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0039422_27	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0039422_28	phrog_9589	93.6	2.2e-27	endolysin	lysis
UniRef90	UHGV-0039422_28	UniRef90_UPI001A8D0C52	172.0	0	CHAP domain-containing protein	N/A
eggNOG-mapper	UHGV-0039422_28	552398.HMPREF0866_03091	166.0	0	CHAP domain	N/A
Pfam	UHGV-0039422_28	PF05257	N/A	N/A	CHAP domain	CHAP
COG	UHGV-0039422_28	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0039422_28	TIGR02594,COG4991	N/A	N/A	N/A	N/A
PHROG	UHGV-0039422_32	phrog_6721	310.5	0	N/A	unknown function
eggNOG-mapper	UHGV-0039422_32	428125.CLOLEP_01387	313.0	0	N/A	N/A
structural_annotation	UHGV-0039422_32	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
PHROG	UHGV-0039422_33	phrog_30930	125.0	3.7e-37	N/A	unknown function
eggNOG-mapper	UHGV-0039422_33	1214184.ALKY01000039_gene933	111.0	5.16e-30	N/A	N/A
UniRef90	UHGV-0039422_37	UniRef90_A0A3A6ECV8	86.3	1.91e-20	N/A	N/A
eggNOG-mapper	UHGV-0039422_37	411470.RUMGNA_00214	62.0	0.0000000000906	N/A	N/A
Pfam	UHGV-0039422_37	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0039422_37	PF04448	N/A	N/A	N/A	N/A
UniRef90	UHGV-0039422_38	UniRef90_A0A417PE05	60.1	0.000000000238	4Fe-4S ferredoxin-type domain-containing protein	N/A
UniRef90	UHGV-0039422_41	UniRef90_A0A8D9PDQ6	135.0	2.55e-40	Restriction alleviation protein	N/A
Pfam	UHGV-0039422_41	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
structural_annotation	UHGV-0039422_41	TIGR03655	N/A	N/A	N/A	N/A
PHROG	UHGV-0039422_42	phrog_38832	93.4	2.7e-28	N/A	unknown function
eggNOG-mapper	UHGV-0039422_42	665956.HMPREF1032_00143	87.0	2.22e-19	N/A	N/A
structural_annotation	UHGV-0039422_42	PF11717,TIGR02450	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0039422	Yes	27,650	45	59	1