vOTU vOTU-116933

vOTU: vOTU-116933

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-116933
Number of genomes	1
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00005 → vOTU-116933
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83
Host range breadth	Genus
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0016201
Biosample ID	N/A
Genome length (bp)	36,085 bps
CheckV completeness	85.07% (Medium-quality)
CDS count	63
CDS density	94.91%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83	Total connections	104	Host agreement	85.58
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 85.07)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0016201_2	1226322.HMPREF1545_00079	90.9	2.51e-22	N/A	N/A
PHROG	UHGV-0016201_3	phrog_28802	65.9	5e-19	N/A	unknown function
eggNOG-mapper	UHGV-0016201_3	476272.RUMHYD_01772	50.8	0.0000081	N/A	N/A
structural_annotation	UHGV-0016201_3	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-0016201_4	phrog_20016	195.2	0	N/A	unknown function
UniRef90	UHGV-0016201_4	UniRef90_A0A285PT46	199.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0016201_4	397290.C810_05214	167.0	0	N/A	N/A
structural_annotation	UHGV-0016201_4	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0016201_5	phrog_16490	139.4	9.10844e-44	N/A	unknown function
eggNOG-mapper	UHGV-0016201_5	658655.HMPREF0988_00917	118.0	1.52e-29	N/A	N/A
PHROG	UHGV-0016201_6	phrog_22984	85.5	4.2e-25	N/A	unknown function
PHROG	UHGV-0016201_7	phrog_21718	104.0	1.4e-30	N/A	unknown function
eggNOG-mapper	UHGV-0016201_7	397290.C810_05210	70.5	0.000000000000389	N/A	N/A
PHROG	UHGV-0016201_8	phrog_3754	116.2	2.3e-34	N/A	unknown function
eggNOG-mapper	UHGV-0016201_8	1226322.HMPREF1545_00073	172.0	0	N/A	N/A
PHROG	UHGV-0016201_10	phrog_9589	91.8	1.3e-26	endolysin	lysis
UniRef90	UHGV-0016201_10	UniRef90_A0A8D9PDX2	240.0	0	MurNAc-LAA protein	N/A
eggNOG-mapper	UHGV-0016201_10	552398.HMPREF0866_03091	150.0	1.37e-39	CHAP domain	N/A
Pfam	UHGV-0016201_10	PF05257	N/A	N/A	CHAP domain	CHAP
Pfam	UHGV-0016201_10	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-0016201_10	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0016201_10	PF01520,PF01471,TIGR02883,COG0860	N/A	N/A	N/A	N/A
PHROG	UHGV-0016201_11	phrog_881	77.7	8.7e-23	holin	lysis
UniRef90	UHGV-0016201_11	UniRef90_UPI001D0692FC	75.5	1.5e-16	phage holin	N/A
eggNOG-mapper	UHGV-0016201_11	742740.HMPREF9474_02251	73.9	9.5e-17	Putative phage holin Dp-1	N/A
Pfam	UHGV-0016201_11	PF16938	N/A	N/A	Putative phage holin Dp-1	Phage_holin_Dp1
structural_annotation	UHGV-0016201_11	PF16938	N/A	N/A	N/A	N/A
PHROG	UHGV-0016201_12	phrog_4105	100.1	1.4e-29	N/A	unknown function
UniRef90	UHGV-0016201_12	UniRef90_A0A8D9UHA9	185.0	0	Holin protein	N/A
eggNOG-mapper	UHGV-0016201_12	411460.RUMTOR_01326	143.0	2.85865e-43	N/A	N/A
PHROG	UHGV-0016201_14	phrog_18593	122.0	4.3e-36	N/A	unknown function
UniRef90	UHGV-0016201_14	UniRef90_A0A2Y9CAD1	164.0	0	Carbohydrate binding domain-containing protein	N/A
eggNOG-mapper	UHGV-0016201_14	411460.RUMTOR_02099	144.0	4.44001e-41	N/A	N/A
Pfam	UHGV-0016201_14	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
structural_annotation	UHGV-0016201_14	PF14600	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0016201_15	1291050.JAGE01000001_gene436	50.8	0.000000487	N/A	N/A
Pfam	UHGV-0016201_16	PF21722	N/A	N/A	Glycine-rich domain	Gly_rich_2
structural_annotation	UHGV-0016201_16	PF21722	N/A	N/A	N/A	N/A
PHROG	UHGV-0016201_17	phrog_30593	40.0	0.000000000053	N/A	unknown function
eggNOG-mapper	UHGV-0016201_17	1235793.C809_03302	57.8	0.00000524	N/A	N/A
PHROG	UHGV-0016201_18	phrog_32744	256.3	0	N/A	unknown function
eggNOG-mapper	UHGV-0016201_18	1120998.AUFC01000030_gene2247	190.0	0	N/A	N/A
PHROG	UHGV-0016201_19	phrog_1194	58.3	1.3e-16	N/A	unknown function
eggNOG-mapper	UHGV-0016201_19	1226322.HMPREF1545_00060	218.0	0	N/A	N/A
structural_annotation	UHGV-0016201_19	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
KOfam	UHGV-0016201_20	K03529	41.4	0.0000000000063	smc; chromosome segregation protein	N/A
PHROG	UHGV-0016201_20	phrog_1535	128.3	0	tail length tape measure protein	tail
UniRef90	UHGV-0016201_20	UniRef90_A0A810PX76	310.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0016201_20	1235797.C816_04182	242.0	0	SLT domain	N/A
COG	UHGV-0016201_20	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0016201_20	PF16789,TIGR02473	N/A	N/A	N/A	N/A
PHROG	UHGV-0016201_21	phrog_806	87.3	1.9e-25	N/A	unknown function
UniRef90	UHGV-0016201_21	UniRef90_A0A212ITM5	217.0	0	Telomeric repeat-binding factor 2	N/A
eggNOG-mapper	UHGV-0016201_21	476272.RUMHYD_01730	164.0	0	N/A	N/A
Pfam	UHGV-0016201_21	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
Pfam	UHGV-0016201_21	PF11611	N/A	N/A	N/A	DUF4352
structural_annotation	UHGV-0016201_21	PF11611,MF_00791,NF003967,COG2967	N/A	N/A	N/A	N/A
PHROG	UHGV-0016201_22	phrog_706	115.4	4.8e-34	N/A	unknown function
UniRef90	UHGV-0016201_22	UniRef90_UPI000682A80B	231.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0016201_22	693746.OBV_18170	216.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0016201_22	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0016201_22	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0016201_23	phrog_11299	76.1	5.2e-22	N/A	unknown function
eggNOG-mapper	UHGV-0016201_23	693746.OBV_18160	138.0	4.14e-40	N/A	N/A
structural_annotation	UHGV-0016201_23	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0016201_24	phrog_3099	89.3	5.1e-26	N/A	unknown function
eggNOG-mapper	UHGV-0016201_24	1226322.HMPREF1545_00056	243.0	0	N/A	N/A
structural_annotation	UHGV-0016201_24	TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-0016201_25	phrog_3266	62.3	7.6e-18	tail completion	connector
UniRef90	UHGV-0016201_25	UniRef90_A0A2Z4QA01	122.0	2.49e-33	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0016201_25	1232443.BAIA02000078_gene24	185.0	0	N/A	N/A
structural_annotation	UHGV-0016201_25	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0016201_26	phrog_556	71.8	8.4e-21	minor head protein	head and packaging
UniRef90	UHGV-0016201_26	UniRef90_UPI00195E1497	181.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0016201_26	1226322.HMPREF1545_00054	150.0	4.2039e-45	Minor capsid protein	N/A
Pfam	UHGV-0016201_26	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0016201_26	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0016201_27	phrog_3366	91.8	7e-27	N/A	unknown function
eggNOG-mapper	UHGV-0016201_27	1226322.HMPREF1545_00053	150.0	7.00649e-45	N/A	N/A
structural_annotation	UHGV-0016201_27	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-0016201_28	phrog_541	110.3	1.1e-32	head-tail adaptor	connector
eggNOG-mapper	UHGV-0016201_28	642492.Clole_0822	69.7	0.000000000000256	N/A	N/A
PHROG	UHGV-0016201_29	phrog_212	266.7	0	major head protein	head and packaging
UniRef90	UHGV-0016201_29	UniRef90_A0A354MR33	502.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0016201_29	1232449.BAHV02000010_gene2714	348.0	0	N/A	N/A
structural_annotation	UHGV-0016201_29	PF05065,MF_04119,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0016201_30	phrog_194	92.0	8.3e-27	head scaffolding protein	head and packaging
UniRef90	UHGV-0016201_30	UniRef90_A0A2Z4Q9Y8	133.0	6.53e-36	Minor structural protein	N/A
eggNOG-mapper	UHGV-0016201_30	1232443.BAIA02000078_gene31	98.2	2.79e-23	N/A	N/A
Pfam	UHGV-0016201_30	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0016201_30	PF06810	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0016201_31	PF18152	N/A	N/A	N/A	N/A
PHROG	UHGV-0016201_32	phrog_581	275.4	0	minor head protein	head and packaging
UniRef90	UHGV-0016201_32	UniRef90_UPI001D080D49	539.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0016201_32	1226322.HMPREF1545_00046	363.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0016201_32	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0016201_32	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0016201_32	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0016201_34	phrog_533	392.3	0	portal protein	head and packaging
UniRef90	UHGV-0016201_34	UniRef90_A0A2U1BEK0	700.0	0	A118 family predicted phage portal protein	N/A
eggNOG-mapper	UHGV-0016201_34	1226322.HMPREF1545_00044	666.0	0	N/A	N/A
Pfam	UHGV-0016201_34	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0016201_34	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0016201_35	K06909	387.3	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0016201_35	phrog_3717	162.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-0016201_35	UniRef90_A0A2U1BEH4	754.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0016201_35	33035.JPJF01000106_gene3136	461.0	0	Terminase small subunit	N/A
Pfam	UHGV-0016201_35	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0016201_35	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0016201_35	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0016201_35	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0016201_35	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0016201_38	K03497	49.4	0.000000000000054	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0016201_38	phrog_21498	285.7	0	N/A	unknown function
UniRef90	UHGV-0016201_38	UniRef90_A0A7X2P836	290.0	0	ParB domain-containing protein	N/A
eggNOG-mapper	UHGV-0016201_38	469378.Ccur_02830	281.0	0	DNA binding	N/A
PADLOC	UHGV-0016201_38	MTase_II_00015	83.1	3.7e-24	Type II methyltransferase	RM
Pfam	UHGV-0016201_38	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-0016201_38	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0016201_38	PF02195,PF05869,MF_02015,TIGR00180,TIGR01712,COG5119	N/A	N/A	N/A	N/A
Pfam	UHGV-0016201_39	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
structural_annotation	UHGV-0016201_40	PF06003,MF_01354,TIGR00739,COG5475	N/A	N/A	N/A	N/A
UniRef90	UHGV-0016201_42	UniRef90_A0A8D9PDK2	61.6	0.000000000182	Zinc-ribbon containing domain	N/A
UniRef90	UHGV-0016201_45	UniRef90_A0A8D9PDK1	119.0	7.71e-33	Anti-repressor	N/A
UniRef90	UHGV-0016201_46	UniRef90_A0A3R6D179	89.0	2.92e-21	Restriction alleviation protein, Lar family	N/A
Pfam	UHGV-0016201_46	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
NCBIFam	UHGV-0016201_46	TIGR03655.1	N/A	N/A	Lar family restriction alleviation protein	N/A
structural_annotation	UHGV-0016201_46	TIGR03655	N/A	N/A	N/A	N/A
KOfam	UHGV-0016201_48	K00558	139.9	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0016201_48	phrog_116	174.2	0	DNA methyltransferase	other
UniRef90	UHGV-0016201_48	UniRef90_D4JYK0	341.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-0016201_48	718252.FP2_16350	341.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-0016201_48	oMTase_00004	171.4	0	orphan methyltransferase	RM
Pfam	UHGV-0016201_48	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-0016201_48	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
KOfam	UHGV-0016201_51	K00390	46.7	0.0000000000001	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0016201_51	phrog_424	118.6	5.2e-35	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0016201_51	UniRef90_A0A1H7KWC5	309.0	0	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase	N/A
eggNOG-mapper	UHGV-0016201_51	665956.HMPREF1032_00140	278.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
Pfam	UHGV-0016201_51	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0016201_51	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0016201_51	PF01507,MF_00063,NF006327,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-0016201_52	phrog_190	113.2	2.1e-33	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0016201_52	UniRef90_A0A8D9PDD6	270.0	0	Endonuclease	N/A
eggNOG-mapper	UHGV-0016201_52	553220.CAMGR0001_2115	84.3	3.89e-19	N/A	N/A
Pfam	UHGV-0016201_52	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0016201_52	PF06356	N/A	N/A	N/A	N/A
UniRef90	UHGV-0016201_54	UniRef90_A0A8D9PDS1	104.0	1.8e-26	Replisome organizer	N/A
structural_annotation	UHGV-0016201_54	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-0016201_55	phrog_15768	42.7	0.000000000011	N/A	unknown function
UniRef90	UHGV-0016201_55	UniRef90_UPI0019563B2C	76.3	3.78e-16	N/A	N/A
eggNOG-mapper	UHGV-0016201_55	1121344.JHZO01000003_gene982	56.2	0.0000000217	N/A	N/A
Pfam	UHGV-0016201_55	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-0016201_55	PF19808	N/A	N/A	N/A	N/A
KOfam	UHGV-0016201_56	K03111	130.9	1.5e-38	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0016201_56	phrog_44	129.5	2.6e-38	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0016201_56	UniRef90_A0A8D9PDS7	239.0	0	Single strand binding protein	N/A
eggNOG-mapper	UHGV-0016201_56	1203606.HMPREF1526_01880	120.0	2.27e-33	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0016201_56	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0016201_56	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0016201_56	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0016201_56	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0016201_56	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0016201_57	phrog_7566	99.1	2.5e-29	N/A	unknown function
UniRef90	UHGV-0016201_57	UniRef90_A0A8D9UHC0	144.0	3.71344e-43	Recombination enhancement function protein nuclease	N/A
eggNOG-mapper	UHGV-0016201_57	693746.OBV_25470	112.0	5.14e-31	N/A	N/A
PHROG	UHGV-0016201_59	phrog_72	60.2	1.8e-17	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0016201_59	UniRef90_A0A8D9PDS2	330.0	0	NinB protein	N/A
eggNOG-mapper	UHGV-0016201_59	445972.ANACOL_01825	135.0	4.41e-38	N/A	N/A
structural_annotation	UHGV-0016201_59	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-0016201_60	phrog_155	91.2	1.4e-26	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0016201_60	UniRef90_A0A1C6J8G0	258.0	0	ERF superfamily	N/A
eggNOG-mapper	UHGV-0016201_60	1268072.PSAB_05935	178.0	0	ERF superfamily	N/A
Pfam	UHGV-0016201_60	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-0016201_60	PF04404,COG4712	N/A	N/A	N/A	N/A
UniRef90	UHGV-0016201_62	UniRef90_A0A8D9UH91	302.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0016201_62	1160721.RBI_I00213	52.4	0.00000111	N/A	N/A
Pfam	UHGV-0016201_62	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0016201_62	PF01381,PF21715,NF041951,TIGR04176,COG1476,COG1654	N/A	N/A	N/A	N/A
PHROG	UHGV-0016201_63	phrog_4433	67.7	1.3e-25	N/A	unknown function
eggNOG-mapper	UHGV-0016201_63	767434.Fraau_1460	54.3	0.00000141	regulation of DNA-templated transcription, elongation	N/A
Pfam	UHGV-0016201_63	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-0016201_63	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-0016201_63	NF007410	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0016201	Yes	36,085	55	85	1