vOTU vOTU-117448

vOTU: vOTU-117448

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-117448
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00269 → vOTU-117448
Host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1529557
Biosample ID	SAMEA2738048
Genome length (bp)	26,687 bps
CheckV completeness	79.35% (Medium-quality)
CDS count	39
CDS density	95.79%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus	Total connections	37	Host agreement	100
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 79.35)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1529557_1	K02315	141.2	9.30042e-42	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-1529557_1	phrog_50	148.2	6.30584e-44	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1529557_1	UniRef90_E6KJ69	523.0	0	IstB_IS21 domain-containing protein	N/A
eggNOG-mapper	UHGV-1529557_1	888049.HMPREF8578_0284	523.0	0	DNA-dependent DNA replication	N/A
Pfam	UHGV-1529557_1	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
COG	UHGV-1529557_1	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-1529557_1	PF01695,MF_00377,NF005931,COG1484	N/A	N/A	N/A	N/A
PHROG	UHGV-1529557_2	phrog_2882	431.7	0	DNA methyltransferase	other
UniRef90	UHGV-1529557_2	UniRef90_UPI0004A438B7	433.0	0	DNA methyltransferase	N/A
eggNOG-mapper	UHGV-1529557_2	1297534.CAUJ01000005_gene198	508.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
Pfam	UHGV-1529557_2	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-1529557_2	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1529557_2	PF00145,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-1529557_3	phrog_1992	150.3	7.00649e-45	MazG-like pyrophosphatase	other
UniRef90	UHGV-1529557_3	UniRef90_A0A0A0YRU9	295.0	0	DNA-binding protein	N/A
eggNOG-mapper	UHGV-1529557_3	888049.HMPREF8578_0682	312.0	0	Mazg nucleotide pyrophosphohydrolase	N/A
Pfam	UHGV-1529557_3	PF03819	N/A	N/A	MazG nucleotide pyrophosphohydrolase domain	MazG
COG	UHGV-1529557_3	COG1694	N/A	N/A	NTP pyrophosphatase, house-cleaning of non-canonical NTPs	N/A
structural_annotation	UHGV-1529557_3	PF08761,MF_01020,NF007113,COG4508	N/A	N/A	N/A	N/A
PHROG	UHGV-1529557_4	phrog_2169	137.0	3.39997e-41	membrane protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1529557_4	UniRef90_A0A0B7LXT3	170.0	0	Phage membrane protein	N/A
PHROG	UHGV-1529557_5	phrog_6716	174.5	0	N/A	unknown function
UniRef90	UHGV-1529557_5	UniRef90_A0A1F0NB55	184.0	0	3-dehydroquinate synthase	N/A
structural_annotation	UHGV-1529557_5	PF10694	N/A	N/A	N/A	N/A
PHROG	UHGV-1529557_6	phrog_236	111.0	2e-32	nucleotide kinase	other
UniRef90	UHGV-1529557_6	UniRef90_Q7Y4J5	162.0	0	Gp29	N/A
eggNOG-mapper	UHGV-1529557_6	157924.Q7Y4J5_9CAUD	162.0	0	N/A	N/A
Pfam	UHGV-1529557_6	PF11753	N/A	N/A	N/A	DUF3310
KOfam	UHGV-1529557_7	K03111	155.4	0	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1529557_7	phrog_44	173.6	0	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1529557_7	UniRef90_UPI001CCEC501	273.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1529557_7	1005705.HMPREF9967_1025	257.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-1529557_7	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1529557_7	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1529557_7	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1529557_7	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1529557_7	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1529557_8	phrog_1638	64.4	1.5e-18	N/A	unknown function
eggNOG-mapper	UHGV-1529557_8	1000588.HMPREF9965_1712	50.8	0.0000000835	N/A	N/A
structural_annotation	UHGV-1529557_8	PF16454	N/A	N/A	N/A	N/A
PHROG	UHGV-1529557_9	phrog_121	92.5	1.3e-28	N/A	unknown function
UniRef90	UHGV-1529557_9	UniRef90_A0A139R8C2	270.0	0	N/A	N/A
eggNOG-mapper	UHGV-1529557_9	1282664.H354_07590	209.0	0	N/A	N/A
Pfam	UHGV-1529557_9	PF07852	N/A	N/A	N/A	DUF1642
structural_annotation	UHGV-1529557_9	PF07852	N/A	N/A	N/A	N/A
PHROG	UHGV-1529557_10	phrog_33566	175.6	0	N/A	unknown function
UniRef90	UHGV-1529557_10	UniRef90_A0A139PKF0	170.0	0	N/A	N/A
PHROG	UHGV-1529557_11	phrog_20205	133.2	5.1e-40	N/A	unknown function
PHROG	UHGV-1529557_12	phrog_884	110.6	6.7e-33	N/A	unknown function
UniRef90	UHGV-1529557_12	UniRef90_UPI001BD2959D	166.0	0	N/A	N/A
eggNOG-mapper	UHGV-1529557_12	585203.SMSK564_1298	117.0	1.3e-33	N/A	N/A
Pfam	UHGV-1529557_12	PF07116	N/A	N/A	N/A	DUF1372
structural_annotation	UHGV-1529557_12	PF07116,COG3585	N/A	N/A	N/A	N/A
PHROG	UHGV-1529557_13	phrog_248	133.1	1.6e-39	transcriptional activator	transcription regulation
UniRef90	UHGV-1529557_13	UniRef90_UPI00094EEE2B	270.0	0	ArpU family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1529557_13	585203.SMSK564_1293	240.0	0	Transcriptional regulator, ArpU family	N/A
NCBIFam	UHGV-1529557_13	TIGR01637.1	N/A	N/A	ArpU family phage packaging/lysis transcriptional regulator	N/A
structural_annotation	UHGV-1529557_13	PF05263,MF_00674,TIGR01637,COG1191	N/A	N/A	N/A	N/A
KOfam	UHGV-1529557_14	K04763	103.4	3.1e-30	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-1529557_14	phrog_216	180.9	0	integrase	integration and excision
UniRef90	UHGV-1529557_14	UniRef90_A0A0E8AH00	372.0	0	Gp32	N/A
eggNOG-mapper	UHGV-1529557_14	585203.SMSK564_1292	293.0	0	Phage integrase family	N/A
Pfam	UHGV-1529557_14	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1529557_14	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1529557_14	PF00589,MF_02055,NF040815,COG4973	N/A	N/A	N/A	N/A
PHROG	UHGV-1529557_15	phrog_338	108.2	9.4e-32	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1529557_15	UniRef90_A0A0X8UVT5	229.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1529557_15	157924.Q7Y4J1_9CAUD	238.0	0	HNH endonuclease	N/A
Pfam	UHGV-1529557_15	PF01844	N/A	N/A	HNH endonuclease	HNH
structural_annotation	UHGV-1529557_15	PF01844,COG1403	N/A	N/A	N/A	N/A
PHROG	UHGV-1529557_16	phrog_104	298.9	0	portal protein	head and packaging
UniRef90	UHGV-1529557_16	UniRef90_Q7Y4J0	790.0	0	Gp34	N/A
eggNOG-mapper	UHGV-1529557_16	585203.SMSK564_1289	810.0	0	Phage portal protein, SPP1 Gp6-like	N/A
structural_annotation	UHGV-1529557_16	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-1529557_17	phrog_2494	483.7	0	minor head protein	head and packaging
UniRef90	UHGV-1529557_17	UniRef90_A0A1X1L1M0	753.0	0	Ntox50 domain-containing protein	N/A
eggNOG-mapper	UHGV-1529557_17	482234.SCAZ3_03695	577.0	0	N/A	N/A
Pfam	UHGV-1529557_17	PF15542	N/A	N/A	Bacterial toxin 50	Ntox50
structural_annotation	UHGV-1529557_17	PF15542	N/A	N/A	N/A	N/A
PHROG	UHGV-1529557_18	phrog_1865	70.3	2e-20	N/A	unknown function
UniRef90	UHGV-1529557_18	UniRef90_A0A3N4GZP0	86.7	4.74e-21	FERM domain-containing protein	N/A
eggNOG-mapper	UHGV-1529557_18	1095737.HMPREF1110_0328	121.0	1.52e-35	N/A	N/A
structural_annotation	UHGV-1529557_18	PF07073,MF_00436,NF008636,COG4568	N/A	N/A	N/A	N/A
PHROG	UHGV-1529557_19	phrog_17688	515.6	0	N/A	unknown function
UniRef90	UHGV-1529557_19	UniRef90_Q7Y4I6	912.0	0	Gp38	N/A
eggNOG-mapper	UHGV-1529557_19	768726.HMPREF9178_1065	942.0	0	phage terminase, large subunit	N/A
COG	UHGV-1529557_19	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1529557_19	PF20441,PF03354,MF_04146,NF033889,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1529557_20	phrog_36217	147.3	2.94273e-44	N/A	unknown function
UniRef90	UHGV-1529557_20	UniRef90_UPI00094E5587	276.0	0	N/A	N/A
eggNOG-mapper	UHGV-1529557_20	585203.SMSK564_1285	212.0	0	N/A	N/A
Pfam	UHGV-1529557_20	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-1529557_20	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-1529557_21	phrog_32396	167.6	0	N/A	unknown function
UniRef90	UHGV-1529557_21	UniRef90_A0A1F1CDF1	567.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-1529557_21	1121864.OMO_02152	496.0	0	Phage capsid family	N/A
Pfam	UHGV-1529557_21	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1529557_21	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
structural_annotation	UHGV-1529557_21	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1529557_22	phrog_1539	77.9	1e-22	Arc-like repressor	transcription regulation
UniRef90	UHGV-1529557_22	UniRef90_A0A120MHA4	101.0	5.97e-27	HeH domain-containing protein	N/A
Pfam	UHGV-1529557_22	PF12949	N/A	N/A	HeH/LEM domain	HeH
structural_annotation	UHGV-1529557_22	PF12949	N/A	N/A	N/A	N/A
PHROG	UHGV-1529557_23	phrog_137	135.6	1.50001e-40	head-tail adaptor Ad1	connector
UniRef90	UHGV-1529557_23	UniRef90_Q7Y4I2	230.0	0	Gp42	N/A
eggNOG-mapper	UHGV-1529557_23	585203.SMSK564_1282	230.0	0	Phage protein Gp19/Gp15/Gp42	N/A
Pfam	UHGV-1529557_23	PF09355	N/A	N/A	N/A	Phage_Gp19
structural_annotation	UHGV-1529557_23	PF09355	N/A	N/A	N/A	N/A
PHROG	UHGV-1529557_24	phrog_501	106.3	1.8e-31	head closure Hc1	connector
UniRef90	UHGV-1529557_24	UniRef90_Q7Y4I1	224.0	0	Gp43	N/A
eggNOG-mapper	UHGV-1529557_24	157924.Q7Y4I1_9CAUD	224.0	0	N/A	N/A
structural_annotation	UHGV-1529557_24	PF12206,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1529557_25	phrog_387	85.0	6.1e-25	neck protein	connector
UniRef90	UHGV-1529557_25	UniRef90_Q7Y4I0	149.0	1.4013e-45	Gp44	N/A
eggNOG-mapper	UHGV-1529557_25	768726.HMPREF9178_1059	149.0	0	N/A	N/A
PHROG	UHGV-1529557_26	phrog_123	64.3	2.2e-18	tail terminator	connector
UniRef90	UHGV-1529557_26	UniRef90_Q7Y4H9	221.0	0	Gp45	N/A
eggNOG-mapper	UHGV-1529557_26	768726.HMPREF9178_1058	221.0	0	N/A	N/A
structural_annotation	UHGV-1529557_26	PF06141	N/A	N/A	N/A	N/A
PHROG	UHGV-1529557_27	phrog_117	175.0	0	major tail protein	tail
UniRef90	UHGV-1529557_27	UniRef90_UPI0011E65AA4	292.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-1529557_27	157924.Q9F4J6_9CAUD	350.0	0	N/A	N/A
structural_annotation	UHGV-1529557_27	PF04630,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1529557_28	phrog_1526	113.1	1e-33	N/A	unknown function
UniRef90	UHGV-1529557_28	UniRef90_A0A139NAV4	115.0	3.8e-31	N/A	N/A
eggNOG-mapper	UHGV-1529557_28	157924.Q9F4J5_9CAUD	191.0	0	N/A	N/A
PHROG	UHGV-1529557_29	phrog_1633	176.4	0	N/A	unknown function
UniRef90	UHGV-1529557_29	UniRef90_UPI00094E4BA3	218.0	0	N/A	N/A
eggNOG-mapper	UHGV-1529557_29	157924.Q9F4J4_9CAUD	245.0	0	N/A	N/A
Pfam	UHGV-1529557_29	PF17318	N/A	N/A	N/A	DUF5361
structural_annotation	UHGV-1529557_29	PF17318	N/A	N/A	N/A	N/A
PHROG	UHGV-1529557_30	phrog_58	299.0	0	tail length tape measure protein	tail
UniRef90	UHGV-1529557_30	UniRef90_Q9F4J3	1069.0	0	PblA	N/A
eggNOG-mapper	UHGV-1529557_30	157924.Q9F4J3_9CAUD	1069.0	0	peptidoglycan catabolic process	N/A
structural_annotation	UHGV-1529557_30	PF20155	N/A	N/A	N/A	N/A
PHROG	UHGV-1529557_31	phrog_33	70.6	3.6e-20	distal tail protein Dit	tail
UniRef90	UHGV-1529557_31	UniRef90_UPI00094EB956	426.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-1529557_31	768726.HMPREF9178_1053	422.0	0	N/A	N/A
COG	UHGV-1529557_31	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1529557_31	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1529557_32	phrog_2270	673.1	0	N/A	unknown function
UniRef90	UHGV-1529557_32	UniRef90_UPI00094E93BE	1390.0	0	tail fiber domain-containing protein	N/A
eggNOG-mapper	UHGV-1529557_32	768726.HMPREF9178_1052	678.0	0	N/A	N/A
Pfam	UHGV-1529557_32	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-1529557_32	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1529557_32	COG4926	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-1529557_34	phrog_1554	207.3	0	N/A	unknown function
UniRef90	UHGV-1529557_34	UniRef90_A0A359YI08	160.0	0	N/A	N/A
eggNOG-mapper	UHGV-1529557_34	1005705.HMPREF9967_1055	345.0	0	N/A	N/A
structural_annotation	UHGV-1529557_34	PF07104	N/A	N/A	N/A	N/A
PHROG	UHGV-1529557_35	phrog_199	70.6	1.9e-20	holin	lysis
UniRef90	UHGV-1529557_35	UniRef90_A0A109W864	282.0	0	Holin	N/A
eggNOG-mapper	UHGV-1529557_35	1000588.HMPREF9965_1686	248.0	0	Bacteriophage holin family	N/A
Pfam	UHGV-1529557_35	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-1529557_35	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
PHROG	UHGV-1529557_36	phrog_297	62.6	6.9e-18	holin	lysis
UniRef90	UHGV-1529557_36	UniRef90_F9PCG9	146.0	2.24208e-44	Holin, phage phi LC3 family	N/A
eggNOG-mapper	UHGV-1529557_36	997830.HMPREF1124_0613	146.0	4.2039e-45	Bacteriophage holin	N/A
Pfam	UHGV-1529557_36	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-1529557_36	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-1529557_36	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1529557_36	COG5546	N/A	N/A	N/A	N/A
KOfam	UHGV-1529557_37	K24355	77.9	6.9e-23	COL23A; collagen type XXIII alpha	N/A
PHROG	UHGV-1529557_37	phrog_32123	623.6	0	N/A	unknown function
UniRef90	UHGV-1529557_37	UniRef90_UPI001BD93596	618.0	0	collagen-like protein	N/A
eggNOG-mapper	UHGV-1529557_37	997830.HMPREF1124_0614	553.0	0	Collagen triple helix repeat (20 copies)	N/A
Pfam	UHGV-1529557_37	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-1529557_37	COG3468	N/A	N/A	Autotransporter adhesin AidA	N/A
structural_annotation	UHGV-1529557_37	PF10651,NF032891	N/A	N/A	N/A	N/A
KOfam	UHGV-1529557_38	K01447	45.1	0.0000000000016	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1529557_38	phrog_7854	148.2	2.8026e-45	endolysin	lysis
UniRef90	UHGV-1529557_38	UniRef90_A0A4D6ADD3	512.0	0	Lysin	N/A
eggNOG-mapper	UHGV-1529557_38	585203.SMSK564_1271	472.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-1529557_38	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-1529557_38	PF19127	N/A	N/A	Choline-binding repeat	Choline_bind_3
COG	UHGV-1529557_38	COG5263	N/A	N/A	Glucan-binding domain (YG repeat)	N/A
structural_annotation	UHGV-1529557_38	PF01510,PF19127,MF_04111,TIGR04035,NF008758,COG5263,COG3023	N/A	N/A	N/A	N/A
PHROG	UHGV-1529557_39	phrog_1529	61.5	2.1e-17	N/A	unknown function
eggNOG-mapper	UHGV-1529557_39	1336234.JAGN01000025_gene751	47.8	0.00000157	N/A	N/A
structural_annotation	UHGV-1529557_39	PF01381,TIGR02607,COG3655	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1529557	Yes	26,687	40	79	1