vOTU vOTU-117510

vOTU: vOTU-117510

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-117510
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00001 → vSUBFAM-02051 → vGENUS-02339 → vOTU-117510
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Eubacterium_F → Eubacterium_F sp003491505
Host range breadth	Species
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0175562
Biosample ID	SAMN06233224
Genome length (bp)	33,724 bps
CheckV completeness	88.42% (Medium-quality)
CDS count	49
CDS density	94.70%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Eubacterium_F → Eubacterium_F sp003491505	Total connections	383	Host agreement	98.96
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Eubacterium_F → Eubacterium_F sp003491505	Total connections	115	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 88.42)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0175562_2	UniRef90_UPI0008BD6C31	88.2	2.98e-19	Cas9 inhibitor AcrIIA9 family protein	N/A
eggNOG-mapper	UHGV-0175562_2	1235792.C808_00065	85.5	7.62e-19	N/A	N/A
structural_annotation	UHGV-0175562_3	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
PHROG	UHGV-0175562_4	phrog_3584	208.5	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0175562_4	UniRef90_A0A1I5LZL1	177.0	0	Relaxase/Mobilisation nuclease domain-containing protein	N/A
eggNOG-mapper	UHGV-0175562_4	642492.Clole_0725	191.0	0	N/A	N/A
structural_annotation	UHGV-0175562_4	PF21578,NF041486	N/A	N/A	N/A	N/A
PHROG	UHGV-0175562_7	phrog_11237	48.4	5.5e-18	N/A	unknown function
eggNOG-mapper	UHGV-0175562_7	478749.BRYFOR_08581	64.3	0.0000000000235	N/A	N/A
KOfam	UHGV-0175562_8	K03427	227.2	0	hsdM; type I restriction enzyme M protein [EC:2.1.1.72]	N/A
PHROG	UHGV-0175562_8	phrog_6380	374.8	0	DNA methyltransferase	other
UniRef90	UHGV-0175562_8	UniRef90_A0A417EL32	400.0	0	N-6 DNA methylase	N/A
eggNOG-mapper	UHGV-0175562_8	592010.GCWU000182_001448	378.0	0	HsdM N-terminal domain	N/A
PADLOC	UHGV-0175562_8	MTase_I_00005	245.0	0	Type I methyltransferase	RM
Pfam	UHGV-0175562_8	PF02384	N/A	N/A	N-6 DNA Methylase	N6_Mtase
Pfam	UHGV-0175562_8	PF01420	N/A	N/A	Type I restriction modification DNA specificity domain	Methylase_S
COG	UHGV-0175562_8	COG0286	N/A	N/A	Type I restriction-modification system, DNA methylase subunit	N/A
structural_annotation	UHGV-0175562_8	PF02384,PF01420,MF_01872,TIGR00497,COG0286,COG0732	N/A	N/A	N/A	N/A
PHROG	UHGV-0175562_9	phrog_585	94.7	9.6e-28	N/A	unknown function
UniRef90	UHGV-0175562_9	UniRef90_A0A7G5MSN3	134.0	5.68e-38	N/A	N/A
eggNOG-mapper	UHGV-0175562_9	1033744.CAEL01000029_gene1306	99.4	1.34e-24	N/A	N/A
Pfam	UHGV-0175562_9	PF10711	N/A	N/A	N/A	DUF2513
structural_annotation	UHGV-0175562_9	PF10711,MF_01819,TIGR03433,COG3432	N/A	N/A	N/A	N/A
KOfam	UHGV-0175562_15	K18830	65.7	9.9e-19	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0175562_15	phrog_8	53.1	0.0000000000000057	transcriptional regulator	transcription regulation
UniRef90	UHGV-0175562_15	UniRef90_UPI001D06FE9D	150.0	1.54143e-44	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0175562_15	903814.ELI_1263	106.0	4.05e-28	Helix-turn-helix domain	N/A
Pfam	UHGV-0175562_15	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0175562_15	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0175562_15	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0175562_17	K23779	46.1	0.0000000000012	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	N/A
Pfam	UHGV-0175562_17	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0175562_17	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
Pfam	UHGV-0175562_18	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
PHROG	UHGV-0175562_20	phrog_1220	126.8	9.7e-38	head protein	head and packaging
UniRef90	UHGV-0175562_20	UniRef90_R6SMG3	78.6	0.000000000000464	Conserved domain protein	N/A
eggNOG-mapper	UHGV-0175562_20	1145276.T479_16185	74.7	0.00000000000162	N/A	N/A
PHROG	UHGV-0175562_21	phrog_538	180.2	0	minor tail protein	tail
UniRef90	UHGV-0175562_21	UniRef90_UPI0011DE0073	129.0	5.82e-32	siphovirus ReqiPepy6 Gp37-like family protein	N/A
eggNOG-mapper	UHGV-0175562_21	428125.CLOLEP_01424	124.0	1.39e-30	N/A	N/A
Pfam	UHGV-0175562_21	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
structural_annotation	UHGV-0175562_21	PF14594,NF033848,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0175562_22	phrog_538	42.3	0.0000000000099	minor tail protein	tail
Pfam	UHGV-0175562_22	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
PHROG	UHGV-0175562_23	phrog_33	57.1	4.7e-16	distal tail protein Dit	tail
UniRef90	UHGV-0175562_23	UniRef90_UPI001D088A46	181.0	0	phage tail family protein	N/A
eggNOG-mapper	UHGV-0175562_23	428125.CLOLEP_01423	118.0	1.06e-28	Phage tail protein	N/A
Pfam	UHGV-0175562_23	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
structural_annotation	UHGV-0175562_23	PF20753,PF16774,TIGR01633,COG4722	N/A	N/A	N/A	N/A
KOfam	UHGV-0175562_24	K20478	63.5	4.7e-19	GOLGB1; golgin subfamily B member 1	N/A
PHROG	UHGV-0175562_24	phrog_5218	307.2	0	N/A	unknown function
UniRef90	UHGV-0175562_24	UniRef90_A0A415G8B3	503.0	0	PhageMin_Tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0175562_24	999413.HMPREF1094_02001	340.0	0	Phage-related minor tail protein	N/A
Pfam	UHGV-0175562_24	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
COG	UHGV-0175562_24	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-0175562_24	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0175562_27	phrog_88	94.4	1.2e-27	major tail protein	tail
UniRef90	UHGV-0175562_27	UniRef90_A0A843GGC8	120.0	2e-29	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0175562_27	1120971.AUCA01000066_gene599	57.8	0.000000128	Phage tail tube protein	N/A
NCBIFam	UHGV-0175562_27	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0175562_27	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0175562_28	PF05657	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0175562_29	TIGR01725	N/A	N/A	N/A	N/A
UniRef90	UHGV-0175562_30	UniRef90_A0A416HJI0	129.0	1.8e-36	Head-tail adaptor protein	N/A
eggNOG-mapper	UHGV-0175562_30	1536774.H70357_10645	57.8	0.0000000031	N/A	N/A
Pfam	UHGV-0175562_30	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-0175562_30	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
structural_annotation	UHGV-0175562_30	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
UniRef90	UHGV-0175562_31	UniRef90_UPI001E432EFF	72.0	0.0000000000000115	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-0175562_31	768704.Desmer_4461	51.2	0.000000252	N/A	N/A
Pfam	UHGV-0175562_31	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-0175562_31	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0175562_32	phrog_10	162.5	0	major head protein	head and packaging
UniRef90	UHGV-0175562_32	UniRef90_A0A417W9T2	429.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0175562_32	411470.RUMGNA_02065	413.0	0	N/A	N/A
Pfam	UHGV-0175562_32	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0175562_32	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0175562_32	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0175562_32	PF05065,PF19962,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0175562_33	K06904	118.4	9.3e-35	N/A	N/A
PHROG	UHGV-0175562_33	phrog_80	150.6	1.54143e-44	head maturation protease	head and packaging
UniRef90	UHGV-0175562_33	UniRef90_R6YQV2	258.0	0	Putative phage prohead protease	N/A
eggNOG-mapper	UHGV-0175562_33	927704.SELR_18200	199.0	0	Caudovirus prohead serine protease	N/A
Pfam	UHGV-0175562_33	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-0175562_33	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-0175562_33	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0175562_33	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0175562_34	phrog_12	134.5	7.80001e-40	portal protein	head and packaging
UniRef90	UHGV-0175562_34	UniRef90_R6Z5U3	456.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0175562_34	457396.CSBG_01047	310.0	0	Portal protein	N/A
Pfam	UHGV-0175562_34	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-0175562_34	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0175562_34	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0175562_35	phrog_9	283.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-0175562_35	UniRef90_R7A0H4	804.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0175562_35	1211817.CCAT010000007_gene1040	498.0	0	Terminase	N/A
Pfam	UHGV-0175562_35	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0175562_35	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0175562_35	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0175562_35	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
KOfam	UHGV-0175562_39	K24214	45.5	0.00000000000073	OTOL1; otolin-1	N/A
PHROG	UHGV-0175562_39	phrog_10972	41.3	0.000000000019	tail fiber protein	tail
eggNOG-mapper	UHGV-0175562_39	908340.HMPREF9406_2567	56.2	0.00000169	N/A	N/A
Pfam	UHGV-0175562_39	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
PHROG	UHGV-0175562_40	phrog_4581	101.3	5.4e-30	terminase small subunit	head and packaging
UniRef90	UHGV-0175562_40	UniRef90_A0A417W8X1	307.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0175562_40	1157490.EL26_20750	197.0	0	HNH endonuclease	N/A
Pfam	UHGV-0175562_40	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0175562_40	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0175562_40	PF13671,MF_03171,NF005251,NF008448,COG4639	N/A	N/A	N/A	N/A
PHROG	UHGV-0175562_41	phrog_51	47.9	0.000000000000026	terminase small subunit	head and packaging
UniRef90	UHGV-0175562_41	UniRef90_UPI001D08E9BA	129.0	1.51e-36	terminase small subunit	N/A
eggNOG-mapper	UHGV-0175562_41	702450.CUW_0530	70.1	0.0000000000000732	Terminase Small Subunit	N/A
Pfam	UHGV-0175562_41	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0175562_41	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0175562_41	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-0175562_42	K01448	106.9	2.5e-31	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0175562_42	phrog_435	180.4	0	endolysin	lysis
UniRef90	UHGV-0175562_42	UniRef90_A0A6L5Y0L2	267.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0175562_42	1232447.BAHW02000005_gene156	186.0	0	Cell wall hydrolase autolysin	N/A
Pfam	UHGV-0175562_42	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-0175562_42	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
COG	UHGV-0175562_42	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0175562_42	PF01520,PF18342,MF_00417,TIGR02883,COG0860,COG4991	N/A	N/A	N/A	N/A
PHROG	UHGV-0175562_43	phrog_1863	80.1	1.4e-23	N/A	unknown function
eggNOG-mapper	UHGV-0175562_43	1232453.BAIF02000059_gene1610	79.3	1.08e-18	N/A	N/A
PHROG	UHGV-0175562_44	phrog_881	61.9	8.1e-18	holin	lysis
UniRef90	UHGV-0175562_44	UniRef90_R7EEV6	84.3	4.86e-20	Conserved domain protein	N/A
eggNOG-mapper	UHGV-0175562_44	1321782.HMPREF1986_02282	79.3	8.02e-19	Putative phage holin Dp-1	N/A
Pfam	UHGV-0175562_44	PF16938	N/A	N/A	Putative phage holin Dp-1	Phage_holin_Dp1
structural_annotation	UHGV-0175562_44	PF16938	N/A	N/A	N/A	N/A
KOfam	UHGV-0175562_45	K14273	326.2	0	xdh; D-xylose 1-dehydrogenase (NADP+, D-xylono-1,5-lactone-forming) [EC:1.1.1.179]	N/A
UniRef90	UHGV-0175562_45	UniRef90_R6YNN4	622.0	0	Oxidoreductase NAD-binding domain protein	N/A
eggNOG-mapper	UHGV-0175562_45	411462.DORLON_01194	387.0	0	Oxidoreductase family, NAD-binding Rossmann fold	N/A
Pfam	UHGV-0175562_45	PF01408	N/A	N/A	Oxidoreductase family, NAD-binding Rossmann fold	GFO_IDH_MocA
Pfam	UHGV-0175562_45	PF02894	N/A	N/A	Oxidoreductase family, C-terminal alpha/beta domain	GFO_IDH_MocA_C
COG	UHGV-0175562_45	COG0673	N/A	N/A	Predicted dehydrogenase	N/A
UniRef90	UHGV-0175562_46	UniRef90_A0A3D2I5I6	1986.0	0	BIG2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0175562_46	1235802.C823_01009	189.0	0	Cysteine-rich secretory protein family	N/A
Pfam	UHGV-0175562_46	PF00188	N/A	N/A	Cysteine-rich secretory protein family	CAP
Pfam	UHGV-0175562_46	PF02368	N/A	N/A	Bacterial Ig-like domain (group 2)	Big_2
Pfam	UHGV-0175562_46	PF06750	N/A	N/A	Bacterial Peptidase A24 N-terminal domain	A24_N_bact
Pfam	UHGV-0175562_46	PF13306	N/A	N/A	BspA type Leucine rich repeat region (6 copies)	LRR_5
COG	UHGV-0175562_46	COG2340	N/A	N/A	Spore germination protein YkwD and related proteins with CAP (CSP/antigen 5/PR1) domain	N/A
PHROG	UHGV-0175562_49	phrog_215	60.6	4.5e-17	structural protein with Ig domain	head and packaging
UniRef90	UHGV-0175562_49	UniRef90_R6YLV6	243.0	0	Bacterial surface proteins containing Ig-like domains	N/A
eggNOG-mapper	UHGV-0175562_49	180332.JTGN01000012_gene323	108.0	6.46e-24	domain, Protein	N/A
Pfam	UHGV-0175562_49	PF02368	N/A	N/A	Bacterial Ig-like domain (group 2)	Big_2
COG	UHGV-0175562_49	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0175562	Yes	33,724	43	88	1