vOTU vOTU-117964

vOTU: vOTU-117964

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-117964
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → RUG14215 → ERR7745346_bin.225
Taxonomy (UHGV)	vFAM-00026 → vOTU-117964
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → RUG14215 → ERR7745346_bin.225
Host range breadth	Species
Lifestyle	temperate (Evidence: integrase)

Representative genome
Genome ID	UHGV-0210315
Biosample ID	SAMN09781784
Genome length (bp)	30,702 bps
CheckV completeness	86.97% (Medium-quality)
CDS count	30
CDS density	86.30%
tRNA count	1
Integrase	Yes
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage		Total connections		Host agreement
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → RUG14215 → ERR7745346_bin.225	Total connections	5	Host agreement	80

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 86.97)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0210315_4	UniRef90_A0A1C5TYF4	568.0	0	Repeat	N/A
eggNOG-mapper	UHGV-0210315_4	1160721.RBI_I00553	203.0	0	N/A	N/A
Pfam	UHGV-0210315_4	PF20585	N/A	N/A	Putative pectate lyase-like adhesive domain	Pectate_lyase_5
Pfam	UHGV-0210315_4	PF09479	N/A	N/A	Listeria-Bacteroides repeat domain (List_Bact_rpt)	Flg_new
Pfam	UHGV-0210315_4	PF03442	N/A	N/A	Carbohydrate binding domain X2	CBM_X2
NCBIFam	UHGV-0210315_4	TIGR02543.1	N/A	N/A	TIGR02543 family repeat protein	N/A
KOfam	UHGV-0210315_5	K07491	93.5	4.3e-27	rayT; REP-associated tyrosine transposase	N/A
PHROG	UHGV-0210315_5	phrog_2577	164.3	0	transposase	integration and excision
UniRef90	UHGV-0210315_5	UniRef90_A0A0P8YA83	284.0	0	Transposase IS200 like protein	N/A
eggNOG-mapper	UHGV-0210315_5	1033744.CAEL01000044_gene674	271.0	0	Transposase-like protein	N/A
Pfam	UHGV-0210315_5	PF01797	N/A	N/A	Transposase IS200 like	Y1_Tnp
NCBIFam	UHGV-0210315_5	NF033573.1	N/A	N/A	IS200/IS605 family transposase	N/A
COG	UHGV-0210315_5	COG1943	N/A	N/A	REP element-mobilizing transposase RayT	N/A
structural_annotation	UHGV-0210315_5	PF01797,MF_01450,NF033573,COG1943	N/A	N/A	N/A	N/A
KOfam	UHGV-0210315_6	K06400	278.2	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0210315_6	phrog_95	258.5	0	integrase	integration and excision
UniRef90	UHGV-0210315_6	UniRef90_A0A1G5HZT8	613.0	0	Site-specific DNA recombinase	N/A
eggNOG-mapper	UHGV-0210315_6	877411.JMMA01000002_gene617	535.0	0	N/A	N/A
Pfam	UHGV-0210315_6	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0210315_6	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0210315_6	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0210315_6	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0210315_6	PF07508,PF00239,PF18822,NF041201,COG1961	N/A	N/A	N/A	N/A
UniRef90	UHGV-0210315_9	UniRef90_J1H965	82.0	7.09e-19	Ribbon-helix-helix protein, CopG family	N/A
eggNOG-mapper	UHGV-0210315_9	1105031.HMPREF1141_0644	82.0	1.19e-19	N/A	N/A
PHROG	UHGV-0210315_10	phrog_372	327.6	0	tail protein	tail
UniRef90	UHGV-0210315_10	UniRef90_F0YWS0	355.0	0	Phage structural protein	N/A
eggNOG-mapper	UHGV-0210315_10	556261.HMPREF0240_01282	355.0	0	N/A	N/A
Pfam	UHGV-0210315_10	PF05895	N/A	N/A	N/A	DUF859
COG	UHGV-0210315_10	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-0210315_10	PF05895,MF_04116,NF010681,COG3291	N/A	N/A	N/A	N/A
PHROG	UHGV-0210315_11	phrog_1067	441.7	0	minor head protein	head and packaging
UniRef90	UHGV-0210315_11	UniRef90_UPI0006925FC0	373.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0210315_11	1408823.AXUS01000025_gene2634	312.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0210315_11	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0210315_11	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0210315_11	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0210315_11	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0210315_12	phrog_33	69.7	6.8e-20	distal tail protein Dit	tail
UniRef90	UHGV-0210315_12	UniRef90_A0A110A7B6	191.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0210315_12	545697.HMPREF0216_00910	166.0	0	tail component	N/A
Pfam	UHGV-0210315_12	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
COG	UHGV-0210315_12	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0210315_12	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0210315_13	phrog_58	89.3	4.8e-26	tail length tape measure protein	tail
UniRef90	UHGV-0210315_13	UniRef90_A0A2X3INJ3	67.8	0.0000000000326	N/A	N/A
eggNOG-mapper	UHGV-0210315_13	1158606.I579_01931	107.0	1.3e-24	phage tail tape measure protein	N/A
COG	UHGV-0210315_13	COG5283	N/A	N/A	Phage-related tail protein	N/A
PHROG	UHGV-0210315_14	phrog_33680	123.9	1.1e-36	N/A	unknown function
UniRef90	UHGV-0210315_14	UniRef90_A0A1M6L1P7	300.0	0	Phage-related minor tail protein	N/A
eggNOG-mapper	UHGV-0210315_14	498761.HM1_2969	293.0	0	nuclear chromosome segregation	N/A
Pfam	UHGV-0210315_14	PF04523	N/A	N/A	Herpes virus tegument protein U30	Herpes_U30
COG	UHGV-0210315_14	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-0210315_14	COG5280	N/A	N/A	N/A	N/A
KOfam	UHGV-0210315_15	K19158	82.9	4.1e-24	yoeB; toxin YoeB [EC:3.1.-.-]	N/A
PHROG	UHGV-0210315_15	phrog_1213	47.2	0.00000000000042	RelE-like toxin	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0210315_15	UniRef90_R5L4T9	127.0	1.03e-36	Putative mRNA interferase YoeB	N/A
eggNOG-mapper	UHGV-0210315_15	525282.HMPREF0391_11187	118.0	7.65e-34	YoeB-like toxin of bacterial type II toxin-antitoxin system	N/A
Pfam	UHGV-0210315_15	PF06769	N/A	N/A	YoeB-like toxin of bacterial type II toxin-antitoxin system	YoeB_toxin
NCBIFam	UHGV-0210315_15	TIGR02116.1	N/A	N/A	Txe/YoeB family addiction module toxin	N/A
COG	UHGV-0210315_15	COG4115	N/A	N/A	Toxin component of the Txe-Axe toxin-antitoxin module, Txe/YoeB family	N/A
structural_annotation	UHGV-0210315_15	PF06769,TIGR02116,COG4115	N/A	N/A	N/A	N/A
KOfam	UHGV-0210315_16	K19159	60.6	3e-17	yefM; antitoxin YefM	N/A
PHROG	UHGV-0210315_16	phrog_10078	55.0	0.0000000000000012	N/A	unknown function
UniRef90	UHGV-0210315_16	UniRef90_R5KTE3	122.0	1.24e-34	Antitoxin	N/A
eggNOG-mapper	UHGV-0210315_16	457415.HMPREF1006_02723	98.2	5.87e-26	toxin-antitoxin pair type II binding	N/A
Pfam	UHGV-0210315_16	PF02604	N/A	N/A	Antitoxin Phd_YefM, type II toxin-antitoxin system	PhdYeFM_antitox
NCBIFam	UHGV-0210315_16	TIGR01552.1	N/A	N/A	type II toxin-antitoxin system prevent-host-death family antitoxin	N/A
COG	UHGV-0210315_16	COG2161	N/A	N/A	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	N/A
structural_annotation	UHGV-0210315_16	PF02604,NF008499,COG2161	N/A	N/A	N/A	N/A
PHROG	UHGV-0210315_18	phrog_2115	40.1	0.00000000007	tail protein	tail
eggNOG-mapper	UHGV-0210315_18	1399942.U3PCS7_9CAUD	88.6	3.42e-21	N/A	N/A
structural_annotation	UHGV-0210315_18	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-0210315_19	phrog_88	99.8	2.7e-29	major tail protein	tail
UniRef90	UHGV-0210315_19	UniRef90_R6GFP9	296.0	0	Putative major tail protein	N/A
eggNOG-mapper	UHGV-0210315_19	573061.Clocel_3970	114.0	1.89e-29	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-0210315_19	TIGR01603.1	N/A	N/A	major tail protein	N/A
COG	UHGV-0210315_19	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0210315_19	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0210315_20	phrog_78	55.5	0.0000000000000012	tail terminator	connector
eggNOG-mapper	UHGV-0210315_20	1262449.CP6013_1046	67.0	0.000000000000494	N/A	N/A
structural_annotation	UHGV-0210315_20	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-0210315_21	phrog_5	48.5	0.00000000000022	tail completion or Neck1 protein	connector
UniRef90	UHGV-0210315_21	UniRef90_R6GEE2	128.0	1.24e-35	Phage protein HK97 gp10 family	N/A
eggNOG-mapper	UHGV-0210315_21	411459.RUMOBE_00932	65.5	0.00000000000878	Phage protein, HK97 gp10 family	N/A
structural_annotation	UHGV-0210315_21	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0210315_22	phrog_25	59.9	4.6e-17	head closure Hc1	connector
UniRef90	UHGV-0210315_22	UniRef90_UPI00193C4754	90.9	1.61e-21	phage head closure protein	N/A
eggNOG-mapper	UHGV-0210315_22	1262449.CP6013_1044	76.3	1.97e-16	Phage head-tail joining protein	N/A
Pfam	UHGV-0210315_22	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-0210315_22	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
COG	UHGV-0210315_22	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-0210315_22	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0210315_23	phrog_40	45.7	0.00000000000092	head-tail adaptor Ad1	connector
UniRef90	UHGV-0210315_23	UniRef90_UPI001BA8BAD6	114.0	6.16e-31	head-tail connector protein	N/A
eggNOG-mapper	UHGV-0210315_23	1399942.U3PCS3_9CAUD	88.6	1.57e-21	N/A	N/A
NCBIFam	UHGV-0210315_23	TIGR01560.2	N/A	N/A	head-tail connector protein	N/A
structural_annotation	UHGV-0210315_23	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0210315_24	phrog_12102	90.1	1.5e-26	N/A	unknown function
UniRef90	UHGV-0210315_24	UniRef90_A0A0X8H090	86.7	7.02e-21	Head fiber protein	N/A
eggNOG-mapper	UHGV-0210315_24	1120978.KB894083_gene905	82.0	7.93e-20	Head fiber protein	N/A
PHROG	UHGV-0210315_25	phrog_10	212.2	0	major head protein	head and packaging
UniRef90	UHGV-0210315_25	UniRef90_A0A168E1E5	368.0	0	Phage capsid family protein	N/A
eggNOG-mapper	UHGV-0210315_25	1414720.CBYM010000002_gene572	352.0	0	Phage major capsid protein, HK97 family	N/A
Pfam	UHGV-0210315_25	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0210315_25	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0210315_25	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0210315_25	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0210315_26	K06904	82.8	6e-24	N/A	N/A
PHROG	UHGV-0210315_26	phrog_80	101.2	1.7e-29	head maturation protease	head and packaging
UniRef90	UHGV-0210315_26	UniRef90_R6GRF8	284.0	0	Phage prohead protease HK97 family	N/A
eggNOG-mapper	UHGV-0210315_26	1414720.CBYM010000001_gene698	200.0	0	Phage prohead protease, HK97 family	N/A
Pfam	UHGV-0210315_26	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-0210315_26	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-0210315_26	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0210315_26	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0210315_27	phrog_12	213.7	0	portal protein	head and packaging
UniRef90	UHGV-0210315_27	UniRef90_UPI0009E8B747	434.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0210315_27	1304866.K413DRAFT_1223	393.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0210315_27	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0210315_27	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0210315_27	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0210315_27	PF04860,MF_04120,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0210315_28	K19157	132.3	3.4e-39	yafQ; mRNA interferase YafQ [EC:3.1.-.-]	N/A
PHROG	UHGV-0210315_28	phrog_7251	126.5	6.3e-38	RelE-like toxin	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0210315_28	UniRef90_A0A174EE27	141.0	5.79997e-42	mRNA interferase YafQ	N/A
eggNOG-mapper	UHGV-0210315_28	469616.FMAG_02543	130.0	1.61e-38	Bacterial toxin of type II toxin-antitoxin system, YafQ	N/A
Pfam	UHGV-0210315_28	PF15738	N/A	N/A	Bacterial toxin of type II toxin-antitoxin system, YafQ	YafQ_toxin
NCBIFam	UHGV-0210315_28	TIGR02385.1	N/A	N/A	type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family	N/A
COG	UHGV-0210315_28	COG3041	N/A	N/A	mRNA-degrading endonuclease YafQ (mRNA interferase), toxin component of the YafQ-DinJ toxin-antitoxin module	N/A
structural_annotation	UHGV-0210315_28	PF15738,TIGR00053,COG3041	N/A	N/A	N/A	N/A
KOfam	UHGV-0210315_29	K07473	96.1	4.5e-28	dinJ; DNA-damage-inducible protein J	N/A
PHROG	UHGV-0210315_29	phrog_2737	81.5	5.8e-24	N/A	unknown function
UniRef90	UHGV-0210315_29	UniRef90_R6GHE4	137.0	1.71e-40	DNA-damage-inducible protein J	N/A
eggNOG-mapper	UHGV-0210315_29	471855.Shel_11400	84.0	4.34e-20	Addiction module antitoxin, RelB DinJ family	N/A
Pfam	UHGV-0210315_29	PF04221	N/A	N/A	RelB antitoxin	RelB
NCBIFam	UHGV-0210315_29	TIGR02384.1	N/A	N/A	type II toxin-antitoxin system RelB/DinJ family antitoxin	N/A
COG	UHGV-0210315_29	COG3077	N/A	N/A	Antitoxin component of the RelBE or YafQ-DinJ toxin-antitoxin module	N/A
structural_annotation	UHGV-0210315_29	PF04221,TIGR02384,COG3077	N/A	N/A	N/A	N/A
PHROG	UHGV-0210315_30	phrog_289	82.5	5.8e-24	GTP-binding domain	other
UniRef90	UHGV-0210315_30	UniRef90_A0A7X6CWD5	127.0	7.5e-36	N/A	N/A
eggNOG-mapper	UHGV-0210315_30	877414.ATWA01000009_gene2435	124.0	2.77e-35	DNA mediated transformation	N/A
Pfam	UHGV-0210315_30	PF10686	N/A	N/A	YspA, cpYpsA-related SLOG family	YAcAr
COG	UHGV-0210315_30	COG0758	N/A	N/A	Predicted Rossmann fold nucleotide-binding protein DprA/Smf involved in DNA uptake	N/A
structural_annotation	UHGV-0210315_30	PF18306,MF_01575,TIGR00732,COG0758	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0210315	Yes	30,702	35	87	1