vOTU vOTU-118042

vOTU: vOTU-118042

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-118042
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00011 → vSUBFAM-03006 → vOTU-118042
Host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Enterococcaceae → Enterococcus_A → Enterococcus_A raffinosus
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0361482
Biosample ID	N/A
Genome length (bp)	24,976 bps
CheckV completeness	64.44% (Medium-quality)
CDS count	32
CDS density	90.40%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Enterococcaceae → Enterococcus_A → Enterococcus_A raffinosus	Total connections	16	Host agreement	93.75
PHIST-predicted host lineage	Bacteria → Firmicutes	Total connections	6	Host agreement	66.67

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 64.44)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0361482_2	1158614.I592_02357	55.5	0.00000000127	N/A	N/A
PHROG	UHGV-0361482_3	phrog_2902	185.4	0	anti-repressor	transcription regulation
UniRef90	UHGV-0361482_3	UniRef90_A0A242GX57	280.0	0	ORF6C domain-containing protein	N/A
eggNOG-mapper	UHGV-0361482_3	1140002.I570_01470	295.0	0	ORF6C domain	N/A
Pfam	UHGV-0361482_3	PF10552	N/A	N/A	ORF6C domain	ORF6C
PHROG	UHGV-0361482_4	phrog_1733	254.0	0	N/A	unknown function
UniRef90	UHGV-0361482_4	UniRef90_UPI001D0BBB46	169.0	0	N/A	N/A
eggNOG-mapper	UHGV-0361482_4	1140002.I570_01471	449.0	0	N/A	N/A
structural_annotation	UHGV-0361482_4	PF11300,NF038070	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0361482_5	638301.HMPREF0444_1532	90.1	1.87e-22	N/A	N/A
structural_annotation	UHGV-0361482_5	PF20063,TIGR01764,COG3311	N/A	N/A	N/A	N/A
PHROG	UHGV-0361482_6	phrog_8	59.0	1.1e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0361482_6	UniRef90_UPI00115AD4EA	141.0	1.44053e-42	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0361482_6	1497679.EP56_15175	90.9	2.23e-23	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0361482_6	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-0361482_6	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0361482_6	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0361482_7	K22299	43.4	0.000000000007	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-0361482_7	phrog_8	83.8	2.7e-24	transcriptional regulator	transcription regulation
UniRef90	UHGV-0361482_7	UniRef90_UPI0011574A61	261.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0361482_7	565664.EFXG_02685	164.0	0	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0361482_7	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0361482_7	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0361482_7	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0361482_8	phrog_87	78.4	7e-23	metallo-protease	other
UniRef90	UHGV-0361482_8	UniRef90_UPI001157D536	288.0	0	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-0361482_8	1234679.BN424_2173	149.0	1.26117e-44	N/A	N/A
Pfam	UHGV-0361482_8	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-0361482_8	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0361482_8	PF06114,COG2856	N/A	N/A	N/A	N/A
KOfam	UHGV-0361482_9	K14059	256.4	0	int; integrase	N/A
PHROG	UHGV-0361482_9	phrog_1	227.5	0	integrase	integration and excision
UniRef90	UHGV-0361482_9	UniRef90_UPI00115BD51E	755.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-0361482_9	1140001.I571_01803	450.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0361482_9	PF14657	N/A	N/A	Arm DNA-binding domain	Arm-DNA-bind_4
Pfam	UHGV-0361482_9	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0361482_9	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0361482_9	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0361482_9	PF00589,PF14659,PF14657,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0361482_10	phrog_31882	103.2	2.1e-30	N/A	unknown function
eggNOG-mapper	UHGV-0361482_10	1196028.ALEF01000031_gene1270	114.0	7.5e-30	N/A	N/A
PHROG	UHGV-0361482_11	phrog_2439	294.7	0	transcriptional regulator	transcription regulation
UniRef90	UHGV-0361482_11	UniRef90_A0A437UJG4	740.0	0	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-0361482_11	387344.LVIS_1070	317.0	0	IrrE N-terminal-like domain	N/A
Pfam	UHGV-0361482_11	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-0361482_11	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-0361482_11	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0361482_11	PF06114,PF01381,MF_00584,NF038139,COG2856,COG1476	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0361482_12	797515.HMPREF9103_00113	89.7	5.21e-19	N/A	N/A
KOfam	UHGV-0361482_13	K22409	126.0	2.1e-37	sle1; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0361482_13	phrog_291	275.6	0	endolysin	lysis
UniRef90	UHGV-0361482_13	UniRef90_A0A437UJB3	844.0	0	LysM peptidoglycan-binding domain-containing protein	N/A
eggNOG-mapper	UHGV-0361482_13	673837.D2IZV5_9CAUD	573.0	0	peptidoglycan catabolic process	N/A
Pfam	UHGV-0361482_13	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-0361482_13	PF01476	N/A	N/A	LysM domain	LysM
structural_annotation	UHGV-0361482_13	PF01476,PF18697,TIGR02899,COG3757,COG1388	N/A	N/A	N/A	N/A
PHROG	UHGV-0361482_14	phrog_881	98.7	2.4e-29	holin	lysis
UniRef90	UHGV-0361482_14	UniRef90_A0A2N8PZ46	111.0	9.94e-31	Holin	N/A
eggNOG-mapper	UHGV-0361482_14	1158614.I592_02317	99.4	9.44e-27	Putative phage holin Dp-1	N/A
Pfam	UHGV-0361482_14	PF16938	N/A	N/A	Putative phage holin Dp-1	Phage_holin_Dp1
structural_annotation	UHGV-0361482_14	PF16938	N/A	N/A	N/A	N/A
PHROG	UHGV-0361482_15	phrog_1893	167.6	0	N/A	unknown function
UniRef90	UHGV-0361482_15	UniRef90_T2F7N5	146.0	2.36819e-43	Phage-related protein	N/A
eggNOG-mapper	UHGV-0361482_15	1158601.I585_01144	169.0	0	N/A	N/A
PHROG	UHGV-0361482_16	phrog_27126	71.4	2.1e-24	neck protein	connector
UniRef90	UHGV-0361482_16	UniRef90_UPI00177CAE16	124.0	1.22e-25	SGNH/GDSL hydrolase family protein	N/A
eggNOG-mapper	UHGV-0361482_16	1158604.I591_00414	90.5	5.99e-16	GDSL-like Lipase/Acylhydrolase	N/A
COG	UHGV-0361482_16	COG2755	N/A	N/A	Lysophospholipase L1 or related esterase. Includes spore coat protein LipC/YcsK	N/A
PHROG	UHGV-0361482_17	phrog_1067	337.2	0	minor head protein	head and packaging
UniRef90	UHGV-0361482_17	UniRef90_A0A437UJ81	1353.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0361482_17	1158612.I580_01364	523.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-0361482_17	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0361482_17	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0361482_17	COG4926	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-0361482_18	phrog_5163	102.0	4.5e-30	minor tail protein	tail
UniRef90	UHGV-0361482_18	UniRef90_A0A437US85	438.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0361482_18	565664.EFXG_01177	245.0	0	Phage tail protein	N/A
Pfam	UHGV-0361482_18	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
NCBIFam	UHGV-0361482_18	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
COG	UHGV-0361482_18	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0361482_18	PF05709,PF20753,TIGR01633,COG4722	N/A	N/A	N/A	N/A
KOfam	UHGV-0361482_19	K10421	43.7	0.0000000000016	CLIP1, RSN; CAP-Gly domain-containing linker protein 1	N/A
PHROG	UHGV-0361482_19	phrog_1686	878.3	0	tail length tape measure protein	tail
UniRef90	UHGV-0361482_19	UniRef90_A0A437UJ30	1550.0	0	Tape measure protein	N/A
eggNOG-mapper	UHGV-0361482_19	1486428.A0A097BYA1_9CAUD	651.0	0	N/A	N/A
Pfam	UHGV-0361482_19	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0361482_19	TIGR02675.1	N/A	N/A	tape measure protein	N/A
structural_annotation	UHGV-0361482_19	PF20155,PF06456,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0361482_20	phrog_441	62.2	9.8e-18	tail assembly chaperone	tail
UniRef90	UHGV-0361482_20	UniRef90_A0A0K9N8J7	63.2	0.000000000134	N/A	N/A
eggNOG-mapper	UHGV-0361482_20	1139219.I569_01371	64.7	0.00000000000299	N/A	N/A
PHROG	UHGV-0361482_21	phrog_183	44.8	0.0000000000023	tail chaperone protein	tail
UniRef90	UHGV-0361482_21	UniRef90_UPI000CF4E0A6	66.2	0.0000000000141	tail assembly chaperone	N/A
eggNOG-mapper	UHGV-0361482_21	85154.O34069_BPO12	64.3	0.0000000000139	Pfam:Phage_TAC_12	N/A
Pfam	UHGV-0361482_21	PF12363	N/A	N/A	Phage tail assembly chaperone protein, TAC	Phage_TAC_12
structural_annotation	UHGV-0361482_21	PF12363	N/A	N/A	N/A	N/A
PHROG	UHGV-0361482_22	phrog_238	194.8	0	major tail protein	tail
UniRef90	UHGV-0361482_22	UniRef90_A0A437UJH2	336.0	0	Phage major tail protein, TP901-1 family	N/A
eggNOG-mapper	UHGV-0361482_22	565664.EFXG_01173	259.0	0	Phage tail tube protein	N/A
Pfam	UHGV-0361482_22	PF06199	N/A	N/A	Phage tail tube protein	Phage_tail_2
NCBIFam	UHGV-0361482_22	TIGR02126.1	N/A	N/A	phage major tail protein, TP901-1 family	N/A
structural_annotation	UHGV-0361482_22	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0361482_23	phrog_176	116.7	1.3e-34	tail terminator	connector
UniRef90	UHGV-0361482_23	UniRef90_A0A437UJ40	248.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0361482_23	201846.B5SP36_9CAUD	184.0	0	N/A	N/A
structural_annotation	UHGV-0361482_23	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-0361482_24	phrog_5	84.4	1.8e-24	tail completion or Neck1 protein	connector
UniRef90	UHGV-0361482_24	UniRef90_UPI001A9C235B	158.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0361482_24	1139219.I569_01375	136.0	4.02999e-40	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0361482_24	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-0361482_24	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0361482_24	PF05069,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0361482_25	phrog_348	111.0	5.9e-33	minor head protein	head and packaging
UniRef90	UHGV-0361482_25	UniRef90_Q38175	125.0	4.07e-35	B3 protein (Fragment)	N/A
eggNOG-mapper	UHGV-0361482_25	663241.C9E2J7_9CAUD	142.0	1.74041e-42	N/A	N/A
structural_annotation	UHGV-0361482_25	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0361482_26	phrog_132	95.1	5e-28	head-tail adaptor	connector
UniRef90	UHGV-0361482_26	UniRef90_UPI001A9BE01A	149.0	8.40779e-45	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-0361482_26	1486428.A0A097BY55_9CAUD	131.0	2.09e-38	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-0361482_26	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-0361482_26	PF05135	N/A	N/A	N/A	N/A
PHROG	UHGV-0361482_27	phrog_933	53.0	5e-16	N/A	unknown function
PHROG	UHGV-0361482_28	phrog_29	228.1	0	major head protein	head and packaging
UniRef90	UHGV-0361482_28	UniRef90_UPI00159D7352	642.0	0	major capsid protein	N/A
eggNOG-mapper	UHGV-0361482_28	565664.EFXG_01167	585.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-0361482_28	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-0361482_28	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0361482_29	phrog_909	107.5	7.1e-32	major head protein	head and packaging
UniRef90	UHGV-0361482_29	UniRef90_A0A7U8FVR7	184.0	0	N/A	N/A
eggNOG-mapper	UHGV-0361482_29	565664.EFXG_01166	184.0	0	N/A	N/A
PHROG	UHGV-0361482_30	phrog_172	128.3	6.1e-38	head scaffolding protein	head and packaging
UniRef90	UHGV-0361482_30	UniRef90_UPI0011579C04	321.0	0	N/A	N/A
eggNOG-mapper	UHGV-0361482_30	565664.EFXG_01165	219.0	0	N/A	N/A
Pfam	UHGV-0361482_30	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-0361482_30	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-0361482_31	phrog_1315	43.8	0.0000000000044	N/A	unknown function
eggNOG-mapper	UHGV-0361482_31	1158601.I585_01159	77.4	1.36e-17	N/A	N/A
COG	UHGV-0361482_32	COG0584	N/A	N/A	Glycerophosphoryl diester phosphodiesterase	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0361482	Yes	24,976	38	64	1