vOTU vOTU-118043

vOTU: vOTU-118043

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-118043
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00332 → vGENUS-00239 → vOTU-118043
Host lineage	Bacteria → Firmicutes_A → Clostridia → Christensenellales → CAG-74 → Ventricola
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0211605
Biosample ID	SAMN10080915
Genome length (bp)	28,295 bps
CheckV completeness	64.24% (Medium-quality)
CDS count	44
CDS density	90.59%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Christensenellales → CAG-74 → Ventricola	Total connections	83	Host agreement	86.75
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 64.24)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0211605_1	UniRef90_UPI001C2EA85E	53.9	0.0000000961	tyrosine-type recombinase/integrase	N/A
COG	UHGV-0211605_1	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
PHROG	UHGV-0211605_4	phrog_20016	213.4	0	N/A	unknown function
UniRef90	UHGV-0211605_4	UniRef90_A0A285PT46	193.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0211605_4	397290.C810_05214	189.0	0	N/A	N/A
structural_annotation	UHGV-0211605_4	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0211605_5	phrog_16490	217.8	0	N/A	unknown function
eggNOG-mapper	UHGV-0211605_5	1408437.JNJN01000043_gene803	191.0	0	N/A	N/A
PHROG	UHGV-0211605_6	phrog_22984	69.2	2.5e-20	N/A	unknown function
PHROG	UHGV-0211605_7	phrog_3754	89.7	3.5e-26	N/A	unknown function
eggNOG-mapper	UHGV-0211605_7	476272.RUMHYD_01764	162.0	0	N/A	N/A
KOfam	UHGV-0211605_10	K22299	51.4	0.000000000000028	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-0211605_10	phrog_8	61.6	1.7e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-0211605_10	UniRef90_A0A1Y4S422	53.1	0.00000646	Transcriptional regulator	N/A
eggNOG-mapper	UHGV-0211605_10	1514668.JOOA01000002_gene2045	52.4	0.00000238	Helix-turn-helix domain	N/A
Pfam	UHGV-0211605_10	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0211605_10	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0211605_10	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
Pfam	UHGV-0211605_14	PF00196	N/A	N/A	Bacterial regulatory proteins, luxR family	GerE
structural_annotation	UHGV-0211605_14	PF21694,TIGR02985	N/A	N/A	N/A	N/A
PHROG	UHGV-0211605_15	phrog_6918	78.8	5e-23	holin	lysis
UniRef90	UHGV-0211605_15	UniRef90_UPI001B07B9B9	90.1	2.53e-21	phage holin, LLH family	N/A
eggNOG-mapper	UHGV-0211605_15	1297617.JPJD01000020_gene301	85.9	2.59e-20	Bacteriophage holin of superfamily 6 (Holin_LLH)	N/A
Pfam	UHGV-0211605_15	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
structural_annotation	UHGV-0211605_15	PF09682,TIGR01673	N/A	N/A	N/A	N/A
PHROG	UHGV-0211605_16	phrog_37604	85.9	4.1e-25	N/A	unknown function
eggNOG-mapper	UHGV-0211605_16	457412.RSAG_01109	76.3	0.00000000000000153	N/A	N/A
PHROG	UHGV-0211605_17	phrog_329	40.3	0.000000000024	minor tail protein	tail
UniRef90	UHGV-0211605_17	UniRef90_A0A2V2FP98	207.0	0	SH3b domain-containing protein	N/A
eggNOG-mapper	UHGV-0211605_17	1444306.JFZC01000099_gene1162	57.4	0.00000133	Bacterial SH3 domain	N/A
Pfam	UHGV-0211605_17	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
COG	UHGV-0211605_17	COG3103	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0211605_17	PF08239,PF00877,NF008096,NF041850,COG4991,COG0791	N/A	N/A	N/A	N/A
KOfam	UHGV-0211605_20	K16617	64.6	6e-19	COL13A; collagen type XIII alpha	N/A
PHROG	UHGV-0211605_20	phrog_5073	93.7	1.8e-27	tail fiber protein	tail
UniRef90	UHGV-0211605_20	UniRef90_UPI0018835F0C	252.0	0	collagen-like protein	N/A
eggNOG-mapper	UHGV-0211605_20	476272.RUMHYD_00002	104.0	1.5e-20	N/A	N/A
Pfam	UHGV-0211605_20	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
structural_annotation	UHGV-0211605_20	PF10651,NF033814	N/A	N/A	N/A	N/A
PHROG	UHGV-0211605_21	phrog_28526	124.5	2.3e-37	N/A	unknown function
UniRef90	UHGV-0211605_21	UniRef90_A0A415D4T1	87.4	8.1e-22	N/A	N/A
eggNOG-mapper	UHGV-0211605_21	411462.DORLON_00769	90.9	5.74e-24	N/A	N/A
Pfam	UHGV-0211605_21	PF04255	N/A	N/A	N/A	DUF433
PHROG	UHGV-0211605_22	phrog_24451	79.1	4.7e-23	N/A	unknown function
eggNOG-mapper	UHGV-0211605_22	931276.Cspa_c07590	75.5	5.21e-16	N/A	N/A
PHROG	UHGV-0211605_23	phrog_4492	47.4	0.00000000000012	tail fiber protein	tail
structural_annotation	UHGV-0211605_23	PF10651,PF03426,NF033675,COG3470	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0211605_24	PF09931	N/A	N/A	N/A	N/A
UniRef90	UHGV-0211605_26	UniRef90_K1UCK4	152.0	4.02e-37	Phage minor structural protein	N/A
eggNOG-mapper	UHGV-0211605_26	1111134.HMPREF1253_0370	73.2	0.000000000122	N/A	N/A
Pfam	UHGV-0211605_26	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
COG	UHGV-0211605_26	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0211605_26	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0211605_27	PF20753,PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0211605_28	phrog_305	57.4	1.1e-16	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0211605_28	1160721.RBI_II00528	171.0	8.53951e-42	Phage tail tape measure protein, TP901 family	N/A
COG	UHGV-0211605_28	COG1006	N/A	N/A	Multisubunit Na+/H+ antiporter, MnhC subunit	N/A
PHROG	UHGV-0211605_29	phrog_18646	54.6	0.0000000000000012	N/A	unknown function
PHROG	UHGV-0211605_30	phrog_885	124.7	5.4e-37	major tail protein	tail
UniRef90	UHGV-0211605_30	UniRef90_A0A101Y2E4	123.0	1.22e-30	Big_5 domain-containing protein	N/A
eggNOG-mapper	UHGV-0211605_30	411465.PEPMIC_00741	141.0	1.25e-39	N/A	N/A
structural_annotation	UHGV-0211605_30	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0211605_31	phrog_17405	42.9	0.000000000008	head protein	head and packaging
UniRef90	UHGV-0211605_31	UniRef90_A0A415JI88	61.6	0.000000000961	N/A	N/A
structural_annotation	UHGV-0211605_31	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-0211605_32	phrog_17977	74.6	1e-21	N/A	unknown function
UniRef90	UHGV-0211605_32	UniRef90_UPI00141211AB	144.0	3.09967e-42	head-tail adaptor protein	N/A
Pfam	UHGV-0211605_32	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
structural_annotation	UHGV-0211605_32	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0211605_34	phrog_29	131.9	5.5e-39	major head protein	head and packaging
UniRef90	UHGV-0211605_34	UniRef90_K1TJK6	404.0	0	Phage protein (Fragment)	N/A
eggNOG-mapper	UHGV-0211605_34	1232443.BAIA02000078_gene29	249.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-0211605_34	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-0211605_34	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0211605_35	phrog_909	82.4	4.5e-24	major head protein	head and packaging
UniRef90	UHGV-0211605_35	UniRef90_K1TUL5	127.0	1.67e-35	N/A	N/A
eggNOG-mapper	UHGV-0211605_35	1497679.EP56_02915	65.9	0.00000000000219	N/A	N/A
structural_annotation	UHGV-0211605_35	PF02924	N/A	N/A	N/A	N/A
PHROG	UHGV-0211605_36	phrog_194	46.6	0.00000000000064	head scaffolding protein	head and packaging
UniRef90	UHGV-0211605_36	UniRef90_A0A174AAF6	84.7	4.07e-17	Clp R domain-containing protein	N/A
structural_annotation	UHGV-0211605_36	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0211605_37	phrog_355	65.9	5.2e-19	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0211605_37	UniRef90_A0A3A9J0H5	196.0	0	N/A	N/A
eggNOG-mapper	UHGV-0211605_37	97138.C820_00250	139.0	1.51004e-41	N/A	N/A
Pfam	UHGV-0211605_37	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-0211605_37	PF14359,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-0211605_40	phrog_595	114.6	9.8e-34	head maturation protease	head and packaging
UniRef90	UHGV-0211605_40	UniRef90_A0A3A9EHQ6	274.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0211605_40	1504822.CCNO01000013_gene286	181.0	0	cell adhesion	N/A
Pfam	UHGV-0211605_40	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-0211605_40	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-0211605_40	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0211605_40	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0211605_41	phrog_64	169.1	0	portal protein	head and packaging
UniRef90	UHGV-0211605_41	UniRef90_A0A285PU84	409.0	0	Phage portal protein, SPP1 Gp6-like	N/A
eggNOG-mapper	UHGV-0211605_41	673376.F2VHW1_9CAUD	186.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0211605_41	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0211605_41	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
KOfam	UHGV-0211605_42	K06909	123.2	2.4e-36	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0211605_42	phrog_10250	147.0	9.94922e-44	N/A	unknown function
UniRef90	UHGV-0211605_42	UniRef90_UPI0002EF417D	419.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0211605_42	476272.RUMHYD_01756	351.0	0	N/A	N/A
Pfam	UHGV-0211605_42	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
Pfam	UHGV-0211605_42	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
NCBIFam	UHGV-0211605_42	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0211605_42	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0211605_42	PF04466,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0211605_44	PF17941,MF_01917,NF010490,COG3886	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0211605	Yes	28,295	55	64	1