vOTU vOTU-118093

vOTU: vOTU-118093

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-118093
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-01513 → vGENUS-01525 → vOTU-118093
Host lineage	Bacteria → Firmicutes_A → Clostridia → Christensenellales → CAG-138 → RUG472 → RUG472 sp900545265
Host range breadth	Species
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1380703
Biosample ID	SAMEA3664596
Genome length (bp)	22,061 bps
CheckV completeness	63.01% (Medium-quality)
CDS count	33
CDS density	97.38%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Christensenellales → CAG-138 → RUG472 → RUG472 sp900545265	Total connections	286	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia	Total connections	6	Host agreement	83.33

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 63.01)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1380703_2	K07451	48.1	0.00000000000022	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-1380703_2	phrog_119	87.2	1.9e-25	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1380703_2	UniRef90_A0A0D8IV26	129.0	1.55e-37	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1380703_2	1226322.HMPREF1545_00111	111.0	3.93e-31	HNH nucleases	N/A
Pfam	UHGV-1380703_2	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1380703_2	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-1380703_2	TIGR02646	N/A	N/A	N/A	N/A
PHROG	UHGV-1380703_3	phrog_361	64.0	2.6e-18	terminase small subunit	head and packaging
UniRef90	UHGV-1380703_3	UniRef90_A0A1C6H6I9	142.0	2.25006e-41	Phage terminase, small subunit	N/A
eggNOG-mapper	UHGV-1380703_3	1033744.CAEL01000029_gene1286	84.0	3.11e-19	Phage terminase, small subunit	N/A
Pfam	UHGV-1380703_3	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
structural_annotation	UHGV-1380703_3	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-1380703_4	phrog_9	297.0	0	terminase large subunit	head and packaging
UniRef90	UHGV-1380703_4	UniRef90_A0A2V2GQ67	1008.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1380703_4	1226322.HMPREF1545_00113	911.0	0	Phage Terminase	N/A
Pfam	UHGV-1380703_4	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1380703_4	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1380703_4	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1380703_4	PF20441,PF03354,MF_04013,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1380703_5	phrog_12	187.7	0	portal protein	head and packaging
UniRef90	UHGV-1380703_5	UniRef90_A0A0D8IVL0	579.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1380703_5	1226322.HMPREF1545_00114	480.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-1380703_5	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-1380703_5	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-1380703_5	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1380703_5	PF04860,MF_04120,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-1380703_6	K06904	143.8	1.49939e-42	N/A	N/A
PHROG	UHGV-1380703_6	phrog_80	165.2	0	head maturation protease	head and packaging
UniRef90	UHGV-1380703_6	UniRef90_U2SBX0	288.0	0	Phage prohead protease, HK97 family	N/A
eggNOG-mapper	UHGV-1380703_6	1226322.HMPREF1545_00115	288.0	0	Phage prohead protease, HK97 family	N/A
Pfam	UHGV-1380703_6	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-1380703_6	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-1380703_6	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-1380703_6	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-1380703_7	phrog_10	218.6	0	major head protein	head and packaging
UniRef90	UHGV-1380703_7	UniRef90_UPI000679B959	649.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-1380703_7	1226322.HMPREF1545_00116	567.0	0	phage major capsid protein, HK97 family	N/A
Pfam	UHGV-1380703_7	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1380703_7	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1380703_7	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1380703_7	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1380703_8	phrog_2550	79.9	1.7e-23	N/A	unknown function
UniRef90	UHGV-1380703_8	UniRef90_R5V091	79.0	2.67e-17	Phage related protein	N/A
eggNOG-mapper	UHGV-1380703_8	1226322.HMPREF1545_00117	92.8	1.52e-23	N/A	N/A
structural_annotation	UHGV-1380703_8	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1380703_9	phrog_19734	79.3	5.2e-23	N/A	unknown function
UniRef90	UHGV-1380703_9	UniRef90_A0A3R6AW46	96.3	2.02e-23	Head-tail adaptor protein	N/A
eggNOG-mapper	UHGV-1380703_9	1235798.C817_04587	77.8	5.65e-17	N/A	N/A
structural_annotation	UHGV-1380703_9	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1380703_10	1235798.C817_04588	79.7	6.65e-18	N/A	N/A
structural_annotation	UHGV-1380703_10	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-1380703_11	phrog_5	45.5	0.0000000000015	tail completion or Neck1 protein	connector
UniRef90	UHGV-1380703_11	UniRef90_R6UNR2	144.0	5.57002e-41	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1380703_11	908340.HMPREF9406_2573	144.0	9.33965e-42	N/A	N/A
structural_annotation	UHGV-1380703_11	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-1380703_12	phrog_88	96.4	2.6e-28	major tail protein	tail
NCBIFam	UHGV-1380703_12	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-1380703_12	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
KOfam	UHGV-1380703_15	K03529	40.9	0.000000000000049	smc; chromosome segregation protein	N/A
PHROG	UHGV-1380703_15	phrog_3981	74.0	2.6e-21	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1380703_15	720554.Clocl_3669	230.0	0	Phage tail tape measure protein, TP901 family	N/A
COG	UHGV-1380703_15	COG5185	N/A	N/A	Chromosome segregation protein NDC80, interacts with SMC proteins	N/A
structural_annotation	UHGV-1380703_15	PF20155	N/A	N/A	N/A	N/A
PHROG	UHGV-1380703_16	phrog_33	65.7	1.1e-18	distal tail protein Dit	tail
UniRef90	UHGV-1380703_16	UniRef90_A0A173Z1X4	189.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1380703_16	1567011.A0A0A7RWN1_9VIRU	105.0	6.47e-25	Phage tail protein	N/A
structural_annotation	UHGV-1380703_16	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1380703_17	phrog_1067	214.2	0	minor head protein	head and packaging
UniRef90	UHGV-1380703_17	UniRef90_A0A1C6H6B4	346.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1380703_17	1123263.AUKY01000068_gene489	283.0	0	Phage minor structural protein	N/A
Pfam	UHGV-1380703_17	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-1380703_17	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1380703_17	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1380703_17	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1380703_18	phrog_372	168.0	0	tail protein	tail
UniRef90	UHGV-1380703_18	UniRef90_UPI001C030C5B	101.0	1.78e-18	N/A	N/A
eggNOG-mapper	UHGV-1380703_18	658659.HMPREF0983_03294	128.0	4.68e-29	N/A	N/A
Pfam	UHGV-1380703_18	PF05895	N/A	N/A	N/A	DUF859
COG	UHGV-1380703_18	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-1380703_18	PF05895,MF_04116,NF010681,COG1361	N/A	N/A	N/A	N/A
KOfam	UHGV-1380703_22	K21471	71.6	1.8e-20	cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]	N/A
PHROG	UHGV-1380703_22	phrog_329	52.3	5.2e-16	minor tail protein	tail
UniRef90	UHGV-1380703_22	UniRef90_A0A316PD96	79.0	0.0000000000000308	NlpC/P60 domain-containing protein	N/A
eggNOG-mapper	UHGV-1380703_22	1449353.JQMQ01000005_gene4103	64.7	0.0000000037	PFAM NLP P60 protein	N/A
Pfam	UHGV-1380703_22	PF00877	N/A	N/A	NlpC/P60 family	NLPC_P60
Pfam	UHGV-1380703_22	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
COG	UHGV-1380703_22	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-1380703_22	PF00877,PF18342,NF033742,NF041850,COG0791,COG4991	N/A	N/A	N/A	N/A
PHROG	UHGV-1380703_23	phrog_1863	61.3	9.3e-18	N/A	unknown function
eggNOG-mapper	UHGV-1380703_23	1235797.C816_02840	107.0	3.04e-29	N/A	N/A
Pfam	UHGV-1380703_26	PF08681	N/A	N/A	N/A	DUF1778
structural_annotation	UHGV-1380703_26	PF03869,NF010256,COG4877	N/A	N/A	N/A	N/A
UniRef90	UHGV-1380703_30	UniRef90_UPI000C7BF263	83.6	3.55e-17	recombination protein NinB	N/A
eggNOG-mapper	UHGV-1380703_30	445972.ANACOL_01825	93.2	1.38e-21	N/A	N/A
PHROG	UHGV-1380703_31	phrog_7566	84.5	8.5e-25	N/A	unknown function
eggNOG-mapper	UHGV-1380703_31	483218.BACPEC_01171	75.5	2.34e-16	N/A	N/A
KOfam	UHGV-1380703_32	K03111	130.9	1.6e-38	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1380703_32	phrog_44	124.9	5.2e-37	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1380703_32	UniRef90_A0A2N2A191	179.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1380703_32	1042163.BRLA_c031440	124.0	1.01e-34	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-1380703_32	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1380703_32	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1380703_32	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1380703_32	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1380703_32	PF00436,MF_00984,NF006445,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1380703_33	phrog_16304	57.6	3.1e-16	N/A	unknown function
eggNOG-mapper	UHGV-1380703_33	1105031.HMPREF1141_0552	56.2	0.00000000566	N/A	N/A
Pfam	UHGV-1380703_33	PF19808	N/A	N/A	N/A	DUF6291

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1380703	Yes	22,061	54	63	1