vOTU vOTU-118176

vOTU: vOTU-118176

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-118176
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00124 → vGENUS-01155 → vOTU-118176
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium
Host range breadth	Genus
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0136610
Biosample ID	N/A
Genome length (bp)	20,977 bps
CheckV completeness	52.83% (Medium-quality)
CDS count	35
CDS density	91.03%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium	Total connections	471	Host agreement	98.3
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae	Total connections	4	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 52.83)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0136610_2	UniRef90_A0A098GES5	135.0	3.36e-39	Putative phage associated protein	N/A
structural_annotation	UHGV-0136610_2	PF01423,MF_00257,NF001963,COG1958	N/A	N/A	N/A	N/A
UniRef90	UHGV-0136610_8	UniRef90_A0A2A7AM72	77.0	4.14e-16	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0136610_8	411460.RUMTOR_02056	56.6	0.0000000133	Bacteriophage CI repressor helix-turn-helix domain	N/A
Pfam	UHGV-0136610_8	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-0136610_8	COG3093	N/A	N/A	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	N/A
structural_annotation	UHGV-0136610_8	PF12844,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0136610_10	PF06776,COG5342	N/A	N/A	N/A	N/A
PHROG	UHGV-0136610_11	phrog_4980	120.5	4.8e-37	superinfection exclusion	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0136610_11	UniRef90_UPI001876A0BB	75.5	0.000000000000242	Ltp family lipoprotein	N/A
eggNOG-mapper	UHGV-0136610_11	246196.MSMEI_1228	82.0	1.55e-16	Host cell surface-exposed lipoprotein	N/A
Pfam	UHGV-0136610_11	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
Pfam	UHGV-0136610_11	PF07553	N/A	N/A	Host cell surface-exposed lipoprotein	Lipoprotein_Ltp
structural_annotation	UHGV-0136610_11	PF02631,MF_01114,NF001062,COG2137	N/A	N/A	N/A	N/A
UniRef90	UHGV-0136610_14	UniRef90_A0A2A7B6N3	195.0	0	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0136610_14	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0136610_14	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0136610_14	PF13560,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0136610_15	K14059	196.3	0	int; integrase	N/A
PHROG	UHGV-0136610_15	phrog_1	173.2	0	integrase	integration and excision
UniRef90	UHGV-0136610_15	UniRef90_A0A367GI93	238.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0136610_15	1507.HMPREF0262_00307	184.0	0	Phage integrase family	N/A
Pfam	UHGV-0136610_15	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0136610_15	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0136610_15	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0136610_16	1378168.N510_03079	97.4	8.85e-22	N/A	N/A
eggNOG-mapper	UHGV-0136610_17	1408437.JNJN01000043_gene802	122.0	3.18e-34	N/A	N/A
PHROG	UHGV-0136610_18	phrog_16490	103.9	6.5e-39	N/A	unknown function
eggNOG-mapper	UHGV-0136610_18	1408437.JNJN01000043_gene803	161.0	1.4013e-45	N/A	N/A
PHROG	UHGV-0136610_23	phrog_374	58.2	1e-25	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0136610_23	UniRef90_UPI0006D56AE3	90.1	4.63e-18	AP2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0136610_23	927704.SELR_12480	77.0	0.000000000000385	N/A	N/A
UniRef90	UHGV-0136610_24	UniRef90_A0A3D0M2U4	85.1	2.5e-18	RHH_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0136610_24	1033733.CAEK01000007_gene1628	87.4	5.29e-20	N/A	N/A
structural_annotation	UHGV-0136610_24	PF03869,NF041793,COG4691	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0136610_26	PF07374,MF_00245,NF001072,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-0136610_28	phrog_15303	78.0	1.1e-22	N/A	unknown function
PHROG	UHGV-0136610_29	phrog_1863	80.8	8.7e-24	N/A	unknown function
eggNOG-mapper	UHGV-0136610_29	718252.FP2_04900	142.0	1.48538e-43	N/A	N/A
KOfam	UHGV-0136610_30	K07273	165.2	0	acm; lysozyme	N/A
PHROG	UHGV-0136610_30	phrog_291	124.6	9.2e-37	endolysin	lysis
UniRef90	UHGV-0136610_30	UniRef90_A0A564U0D3	347.0	0	Autolytic lysozyme	N/A
eggNOG-mapper	UHGV-0136610_30	718252.FP2_04890	213.0	0	hydrolase, family 25	N/A
Pfam	UHGV-0136610_30	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0136610_30	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0136610_30	PF01183,TIGR04053,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-0136610_31	phrog_35313	48.9	0.000000000000081	N/A	unknown function
UniRef90	UHGV-0136610_31	UniRef90_A0A3E0AFC2	226.0	0	Putative BNR repeat neuraminidase	N/A
eggNOG-mapper	UHGV-0136610_31	882082.SaccyDRAFT_3252	74.7	0.0000000000345	BNR repeat-containing family member	N/A
COG	UHGV-0136610_31	COG4225	N/A	N/A	Rhamnogalacturonyl hydrolase YesR	N/A
structural_annotation	UHGV-0136610_31	PF10651,NF038186	N/A	N/A	N/A	N/A
PHROG	UHGV-0136610_33	phrog_1067	187.8	0	minor head protein	head and packaging
UniRef90	UHGV-0136610_33	UniRef90_A0A2A7AM44	485.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0136610_33	1027396.LMOSA_21510	108.0	6.06e-22	Prophage endopeptidase tail	N/A
Pfam	UHGV-0136610_33	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0136610_33	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0136610_33	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0136610_33	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0136610_34	phrog_33	84.2	2.7e-24	distal tail protein Dit	tail
UniRef90	UHGV-0136610_34	UniRef90_A0A1C6H6D2	127.0	1.65e-32	Phage-related protein	N/A
eggNOG-mapper	UHGV-0136610_34	439292.Bsel_2995	100.0	4.38e-23	tail component	N/A
COG	UHGV-0136610_34	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0136610_34	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0136610_35	phrog_58	77.4	1.4e-22	tail length tape measure protein	tail
UniRef90	UHGV-0136610_35	UniRef90_A0A2A7ALS3	504.0	0	TMP_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0136610_35	641107.CDLVIII_4361	78.6	0.00000000000465	tail tape measure protein	N/A
COG	UHGV-0136610_35	COG5412	N/A	N/A	Phage-related protein	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0136610	Yes	20,977	53	53	1