vOTU vOTU-118236

vOTU: vOTU-118236

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-118236
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00007 → vSUBFAM-00026 → vGENUS-00364 → vOTU-118236
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Lachnospira
Host range breadth	Genus
Lifestyle	temperate (evidence: geNomad)

Representative genome
Genome ID	UHGV-0152158
Biosample ID	SAMN06115497
Genome length (bp)	39,106 bps
CheckV completeness	68.60% (Medium-quality)
CDS count	65
CDS density	86.56%
tRNA count	2
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Lachnospira	Total connections	2807	Host agreement	90.13
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 68.6)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0152158_2	UniRef90_UPI001D05EDA5	80.5	1.6e-18	LuxR C-terminal-related transcriptional regulator	N/A
Pfam	UHGV-0152158_2	PF00196	N/A	N/A	Bacterial regulatory proteins, luxR family	GerE
structural_annotation	UHGV-0152158_2	PF00196,MF_00245,NF001067,COG2771	N/A	N/A	N/A	N/A
KOfam	UHGV-0152158_4	K06400	285.2	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0152158_4	phrog_95	287.6	0	integrase	integration and excision
UniRef90	UHGV-0152158_4	UniRef90_UPI001D084942	705.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-0152158_4	1384065.JAGS01000001_gene1134	258.0	0	N/A	N/A
Pfam	UHGV-0152158_4	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0152158_4	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0152158_4	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0152158_4	PF00239,PF07508,NF041201,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-0152158_6	phrog_21718	47.4	0.00000000000034	N/A	unknown function
eggNOG-mapper	UHGV-0152158_6	658655.HMPREF0988_00919	102.0	4.2e-25	N/A	N/A
structural_annotation	UHGV-0152158_6	NF033819	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0152158_7	658655.HMPREF0988_00918	81.3	2.14e-19	N/A	N/A
PHROG	UHGV-0152158_8	phrog_16490	184.3	0	N/A	unknown function
eggNOG-mapper	UHGV-0152158_8	397290.C810_01328	196.0	0	N/A	N/A
PHROG	UHGV-0152158_9	phrog_20016	222.3	0	N/A	unknown function
UniRef90	UHGV-0152158_9	UniRef90_A0A285PT46	159.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0152158_9	397290.C810_05214	233.0	0	N/A	N/A
structural_annotation	UHGV-0152158_9	PF18573,NF033147	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0152158_10	658655.HMPREF0988_00915	124.0	1.44e-32	N/A	N/A
PHROG	UHGV-0152158_11	phrog_1233	57.1	3.7e-16	N/A	unknown function
UniRef90	UHGV-0152158_11	UniRef90_A0A345BPX6	93.2	1.59e-22	Metal-dependent hydrolase	N/A
eggNOG-mapper	UHGV-0152158_11	658655.HMPREF0988_00914	105.0	4.13e-28	N/A	N/A
Pfam	UHGV-0152158_11	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
KOfam	UHGV-0152158_13	K19090	139.4	2.89999e-41	cas5t; CRISPR-associated protein Cas5t	N/A
UniRef90	UHGV-0152158_13	UniRef90_UPI0015707911	147.0	3.75e-40	CRISPR-associated protein Cas5	N/A
eggNOG-mapper	UHGV-0152158_13	1128398.Curi_c06220	105.0	1.36e-24	CRISPR-associated protein (Cas_Cas5)	N/A
PADLOC	UHGV-0152158_13	cas_Cas5t	80.7	3.7e-23	CRISPR-associated protein Cas5, subtype I-B/TNEAP	CRISPR-CAS
COG	UHGV-0152158_13	COG1688	N/A	N/A	CRISPR/Cas system-associated protein Cas5, RAMP superfamily	N/A
structural_annotation	UHGV-0152158_13	PF09704,TIGR01895,COG1688	N/A	N/A	N/A	N/A
PHROG	UHGV-0152158_14	phrog_10678	46.4	0.0000000000011	N/A	unknown function
KOfam	UHGV-0152158_19	K07727	56.9	6.4e-16	K07727; putative transcriptional regulator	N/A
UniRef90	UHGV-0152158_19	UniRef90_A0A415M7P1	142.0	8.82818e-43	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0152158_19	411470.RUMGNA_00075	105.0	4.63e-29	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0152158_19	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-0152158_19	PF13443,NF000090,COG3655	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0152158_20	PF20795	N/A	N/A	N/A	N/A
UniRef90	UHGV-0152158_23	UniRef90_A0A8D9UIS5	155.0	8.40779e-44	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-0152158_23	658655.HMPREF0988_00895	139.0	2.96e-39	N/A	N/A
PHROG	UHGV-0152158_24	phrog_229	119.0	3.7e-35	MazG-like pyrophosphatase	other
UniRef90	UHGV-0152158_24	UniRef90_R7BGE2	167.0	0	MazG nucleotide pyrophosphohydrolase domain	N/A
eggNOG-mapper	UHGV-0152158_24	428125.CLOLEP_01391	96.7	4.28e-24	MazG nucleotide pyrophosphohydrolase domain	N/A
Pfam	UHGV-0152158_24	PF03819	N/A	N/A	MazG nucleotide pyrophosphohydrolase domain	MazG
COG	UHGV-0152158_24	COG1694	N/A	N/A	NTP pyrophosphatase, house-cleaning of non-canonical NTPs	N/A
structural_annotation	UHGV-0152158_24	PF03819,MF_01020,TIGR03188,COG1694	N/A	N/A	N/A	N/A
PHROG	UHGV-0152158_27	phrog_22444	79.2	4.5e-23	N/A	unknown function
UniRef90	UHGV-0152158_27	UniRef90_A0A5S3QIX1	148.0	3.66e-38	Helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0152158_27	1121422.AUMW01000042_gene1260	158.0	9.93521e-43	DnaD domain protein	N/A
COG	UHGV-0152158_27	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0152158_27	PF05584,NF000243,COG0640	N/A	N/A	N/A	N/A
PHROG	UHGV-0152158_28	phrog_14314	45.1	0.0000000000024	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0152158_28	UniRef90_A0A8D9PGN5	339.0	0	HNH endonuclease	N/A
Pfam	UHGV-0152158_28	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0152158_28	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0152158_28	PF01844	N/A	N/A	N/A	N/A
UniRef90	UHGV-0152158_29	UniRef90_A0A8D9PGW1	128.0	8.27e-38	HTH psq-type domain-containing protein	N/A
structural_annotation	UHGV-0152158_29	PF05225,COG2886	N/A	N/A	N/A	N/A
PHROG	UHGV-0152158_36	phrog_38	147.5	9.66896e-44	terminase large subunit	head and packaging
UniRef90	UHGV-0152158_36	UniRef90_A0A8D9UIV2	1144.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0152158_36	397290.C810_01390	684.0	0	chromosome segregation	N/A
Pfam	UHGV-0152158_36	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
COG	UHGV-0152158_36	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0152158_36	PF17289,PF03237,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
PHROG	UHGV-0152158_37	phrog_36	62.7	8e-18	transcriptional regulator	transcription regulation
UniRef90	UHGV-0152158_37	UniRef90_A0A352SH29	85.9	2.82e-19	RNA polymerase subunit sigma-70 (Fragment)	N/A
eggNOG-mapper	UHGV-0152158_37	97138.C820_00772	68.9	0.000000000000581	sigma factor activity	N/A
Pfam	UHGV-0152158_37	PF07374	N/A	N/A	N/A	DUF1492
COG	UHGV-0152158_37	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0152158_37	PF07374,MF_00674,NF008895,COG1342	N/A	N/A	N/A	N/A
UniRef90	UHGV-0152158_38	UniRef90_A0A8D9UIR9	149.0	1.4013e-45	RimK-related lysine biosynthesis protein	N/A
PHROG	UHGV-0152158_39	phrog_64	163.3	0	portal protein	head and packaging
UniRef90	UHGV-0152158_39	UniRef90_R7BGE4	757.0	0	SPP1 family phage portal protein	N/A
eggNOG-mapper	UHGV-0152158_39	1298920.KI911353_gene2663	478.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0152158_39	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0152158_39	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
UniRef90	UHGV-0152158_40	UniRef90_R6C0B6	120.0	4.35e-31	Phage capsid scaffolding protein	N/A
PHROG	UHGV-0152158_41	phrog_909	46.9	0.00000000000048	major head protein	head and packaging
eggNOG-mapper	UHGV-0152158_41	1298920.KI911353_gene2661	123.0	6.59e-35	N/A	N/A
PHROG	UHGV-0152158_42	phrog_29	166.2	0	major head protein	head and packaging
UniRef90	UHGV-0152158_42	UniRef90_UPI001D02C54B	675.0	0	major capsid protein	N/A
eggNOG-mapper	UHGV-0152158_42	1298920.KI911353_gene2660	351.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-0152158_42	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-0152158_42	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-0152158_43	UniRef90_A0A416G2T8	52.4	0.000000376	Rho_N domain-containing protein	N/A
structural_annotation	UHGV-0152158_43	PF21169	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0152158_44	397290.C810_01402	71.2	0.0000000000000249	N/A	N/A
PHROG	UHGV-0152158_45	phrog_4105	93.8	1.4e-27	N/A	unknown function
eggNOG-mapper	UHGV-0152158_45	411459.RUMOBE_00911	160.0	0	N/A	N/A
PHROG	UHGV-0152158_46	phrog_1129	80.2	1.8e-23	holin	lysis
UniRef90	UHGV-0152158_46	UniRef90_A0A8D9UII9	151.0	0	Holin	N/A
eggNOG-mapper	UHGV-0152158_46	411461.DORFOR_00721	98.2	8.9e-26	N/A	N/A
Pfam	UHGV-0152158_46	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0152158_46	PF06946	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0152158_47	1298920.KI911353_gene2656	57.8	0.0000000112	N/A	N/A
structural_annotation	UHGV-0152158_47	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0152158_49	1298920.KI911353_gene2654	180.0	0	N/A	N/A
AcrCatalog	UHGV-0152158_49	cluster_24841	85.5	6.07e-23	NA	N/A
structural_annotation	UHGV-0152158_50	PF05657	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0152158_51	476272.RUMHYD_01968	146.0	1.15047e-42	N/A	N/A
structural_annotation	UHGV-0152158_51	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0152158_53	phrog_36112	68.3	8.9e-20	N/A	unknown function
UniRef90	UHGV-0152158_53	UniRef90_A0A8D9PG71	294.0	0	Tail assembly chaperone protein	N/A
eggNOG-mapper	UHGV-0152158_53	1298920.KI911353_gene2651	115.0	1.71e-30	N/A	N/A
structural_annotation	UHGV-0152158_53	PF16478	N/A	N/A	N/A	N/A
PHROG	UHGV-0152158_55	phrog_28918	75.8	3.9e-22	N/A	unknown function
UniRef90	UHGV-0152158_55	UniRef90_A0A8D9PGP0	621.0	0	Minor tail protein	N/A
eggNOG-mapper	UHGV-0152158_55	1298920.KI911353_gene2649	161.0	4.42e-40	tape measure	N/A
COG	UHGV-0152158_55	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0152158_55	PF20155	N/A	N/A	N/A	N/A
PHROG	UHGV-0152158_56	phrog_1535	70.6	3.3e-29	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0152158_56	483218.BACPEC_01146	95.5	3.35e-17	domain protein	N/A
COG	UHGV-0152158_56	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
UniRef90	UHGV-0152158_58	UniRef90_UPI00174DD543	59.3	0.000000000221	CopG family transcriptional regulator	N/A
structural_annotation	UHGV-0152158_58	PF01402,NF041793,COG4710	N/A	N/A	N/A	N/A
PHROG	UHGV-0152158_60	phrog_2657	224.2	0	transcriptional regulator	transcription regulation
UniRef90	UHGV-0152158_60	UniRef90_R7BHB1	361.0	0	Phage regulatory protein Rha family	N/A
eggNOG-mapper	UHGV-0152158_60	33035.JPJF01000043_gene993	308.0	0	N/A	N/A
Pfam	UHGV-0152158_60	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
NCBIFam	UHGV-0152158_60	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
COG	UHGV-0152158_60	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
structural_annotation	UHGV-0152158_60	PF09669,TIGR02681,COG3646	N/A	N/A	N/A	N/A
PHROG	UHGV-0152158_62	phrog_1194	66.3	4.6e-19	N/A	unknown function
eggNOG-mapper	UHGV-0152158_62	1232453.BAIF02000058_gene1638	60.8	0.000000000333	N/A	N/A
structural_annotation	UHGV-0152158_62	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0152158_63	PF07761	N/A	N/A	N/A	N/A
PHROG	UHGV-0152158_64	phrog_6616	146.7	1.59748e-43	tail protein	tail
UniRef90	UHGV-0152158_64	UniRef90_A0A8D9PGP3	818.0	0	Minor structural protein	N/A
eggNOG-mapper	UHGV-0152158_64	1294142.CINTURNW_1706	299.0	0	Phage minor structural protein	N/A
COG	UHGV-0152158_64	COG4926	N/A	N/A	Phage-related protein	N/A
KOfam	UHGV-0152158_65	K07705	121.2	1.1e-35	lytT, lytR; two-component system, LytTR family, response regulator LytT	N/A
PHROG	UHGV-0152158_65	phrog_8810	83.9	2e-24	N/A	unknown function
UniRef90	UHGV-0152158_65	UniRef90_R7R5H2	433.0	0	Stage 0 sporulation protein A homolog	N/A
eggNOG-mapper	UHGV-0152158_65	397291.C804_02573	286.0	0	LytTr DNA-binding domain	N/A
Pfam	UHGV-0152158_65	PF00072	N/A	N/A	Response regulator receiver domain	Response_reg
Pfam	UHGV-0152158_65	PF04397	N/A	N/A	LytTr DNA-binding domain	LytTR
COG	UHGV-0152158_65	COG3279	N/A	N/A	DNA-binding response regulator, LytR/AlgR family	N/A
structural_annotation	UHGV-0152158_65	PF04397,PF00072,MF_00981,NF010684,COG3279	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0152158	Yes	39,106	36	69	1
UHGV-1539779	No	38,515	36	68	1