vOTU vOTU-118573

vOTU: vOTU-118573

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-118573
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Peptostreptococcales → Anaerovoracaceae → CAG-238 → ERR7738552_bin.355
Taxonomy (UHGV)	vFAM-00008 → vSUBFAM-00226 → vGENUS-00138 → vOTU-118573
Host lineage	Bacteria → Firmicutes_C → Negativicutes → Acidaminococcales → Acidaminococcaceae → Phascolarctobacterium_A
Host range breadth	Genus
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0030039
Biosample ID	SAMEA4765689
Genome length (bp)	28,637 bps
CheckV completeness	61.36% (Medium-quality)
CDS count	49
CDS density	84.24%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_C → Negativicutes → Acidaminococcales → Acidaminococcaceae → Phascolarctobacterium_A	Total connections	307	Host agreement	96.42
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Peptostreptococcales → Anaerovoracaceae → CAG-238 → ERR7738552_bin.355	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 61.36)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-0030039_2	PF20075,TIGR03070,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0030039_6	K03111	55.2	0.0000000000000018	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0030039_6	phrog_44	59.9	6.9e-17	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0030039_6	UniRef90_A0A1Q6RQK6	249.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0030039_6	641112.ACOK01000116_gene2637	62.4	0.000000000122	Single-strand binding protein family	N/A
Pfam	UHGV-0030039_6	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0030039_6	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0030039_6	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0030039_6	PF00436,MF_00984,TIGR00621,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-0030039_7	K01160	59.8	7.4e-17	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0030039_7	phrog_140	134.6	4.9e-40	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0030039_7	UniRef90_A0A316S9J1	144.0	1.23006e-41	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0030039_7	743719.PaelaDRAFT_5642	125.0	6.27e-35	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0030039_7	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0030039_7	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0030039_7	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0030039_9	PF16857,MF_00273,NF001981,COG2157	N/A	N/A	N/A	N/A
UniRef90	UHGV-0030039_11	UniRef90_A0A6N7WVF3	54.7	0.000000873	Restriction endonuclease subunit S	N/A
PHROG	UHGV-0030039_13	phrog_954	181.7	0	DNA methyltransferase	other
UniRef90	UHGV-0030039_13	UniRef90_A0A226QS88	172.0	0	SAM-dependent methyltransferase	N/A
eggNOG-mapper	UHGV-0030039_13	457405.FSDG_01549	162.0	0	methyltransferase	N/A
PADLOC	UHGV-0030039_13	MTase_II_00074	151.9	4.2039e-45	Type II methyltransferase	RM
COG	UHGV-0030039_13	COG0500	N/A	N/A	SAM-dependent methyltransferase	N/A
structural_annotation	UHGV-0030039_13	PF01170,MF_01057,TIGR00446,COG4123	N/A	N/A	N/A	N/A
PHROG	UHGV-0030039_14	phrog_10714	52.7	0.0000000000000067	N/A	unknown function
structural_annotation	UHGV-0030039_14	PF21173	N/A	N/A	N/A	N/A
PHROG	UHGV-0030039_17	phrog_12728	147.2	3.50325e-44	N/A	unknown function
UniRef90	UHGV-0030039_17	UniRef90_A0A516KMW1	77.0	4.99e-16	Putative membrane lipoprotein	N/A
eggNOG-mapper	UHGV-0030039_17	742765.HMPREF9457_02125	68.2	0.00000000000024	N/A	N/A
PHROG	UHGV-0030039_18	phrog_7545	49.6	0.000000000000058	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0030039_18	UniRef90_A0A6N2TWZ2	184.0	0	HNHc domain-containing protein	N/A
eggNOG-mapper	UHGV-0030039_18	935948.KE386495_gene1350	52.8	0.000000946	HNH endonuclease	N/A
Pfam	UHGV-0030039_18	PF13392	N/A	N/A	HNH endonuclease	HNH_3
KOfam	UHGV-0030039_19	K00558	263.9	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0030039_19	phrog_116	291.8	0	DNA methyltransferase	other
UniRef90	UHGV-0030039_19	UniRef90_R6WTQ1	680.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-0030039_19	411460.RUMTOR_00462	397.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-0030039_19	MTase_II_00058	211.6	0	Type II methyltransferase	RM
Pfam	UHGV-0030039_19	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-0030039_19	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-0030039_19	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0030039_19	PF00145,MF_00786,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-0030039_22	phrog_5968	154.3	0	replisome organizer	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0030039_22	UniRef90_R6WTP4	182.0	0	N-terminal phage replisome organizer	N/A
eggNOG-mapper	UHGV-0030039_22	1211817.CCAT010000007_gene1058	132.0	6.47e-34	N-terminal phage replisome organiser (Phage_rep_org_N)	N/A
Pfam	UHGV-0030039_22	PF09681	N/A	N/A	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
NCBIFam	UHGV-0030039_22	TIGR01714.1	N/A	N/A	phage replisome organizer, putative, N-terminal region	N/A
COG	UHGV-0030039_22	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0030039_22	PF09681,TIGR01714,TIGR01446,COG3935	N/A	N/A	N/A	N/A
KOfam	UHGV-0030039_24	K07455	201.0	0	recT; recombination protein RecT	N/A
PHROG	UHGV-0030039_24	phrog_148	210.5	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0030039_24	UniRef90_R6XVK6	355.0	0	Putative phage RecT family protein	N/A
eggNOG-mapper	UHGV-0030039_24	525257.HMPREF0204_11404	204.0	0	RecT family	N/A
Pfam	UHGV-0030039_24	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-0030039_24	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-0030039_24	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-0030039_24	PF03837,TIGR00616,COG3723	N/A	N/A	N/A	N/A
UniRef90	UHGV-0030039_25	UniRef90_R6WLK2	112.0	7.33e-31	Conserved domain protein	N/A
Pfam	UHGV-0030039_25	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
PHROG	UHGV-0030039_26	phrog_434	339.2	0	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0030039_26	UniRef90_R6WGP6	612.0	0	Putative phage-type endonuclease	N/A
eggNOG-mapper	UHGV-0030039_26	706434.HMPREF9429_00551	370.0	0	YqaJ viral recombinase family protein	N/A
Pfam	UHGV-0030039_26	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
NCBIFam	UHGV-0030039_26	TIGR03033.1	N/A	N/A	putative phage-type endonuclease	N/A
COG	UHGV-0030039_26	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-0030039_26	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
PHROG	UHGV-0030039_27	phrog_14367	67.1	1.3e-19	N/A	unknown function
UniRef90	UHGV-0030039_27	UniRef90_R6WTN1	207.0	0	Peptidoglycan-binding LysM	N/A
eggNOG-mapper	UHGV-0030039_27	1304865.JAGF01000001_gene3736	49.3	0.00000797	PFAM Peptidoglycan-binding lysin domain	N/A
Pfam	UHGV-0030039_27	PF01476	N/A	N/A	LysM domain	LysM
COG	UHGV-0030039_27	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-0030039_27	MF_02014,NF010723,COG1388	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0030039_28	NF041909	N/A	N/A	N/A	N/A
PHROG	UHGV-0030039_29	phrog_6058	70.9	1.1e-20	N/A	unknown function
UniRef90	UHGV-0030039_29	UniRef90_A0A0U9H7T0	56.6	0.0000000048	Modification methylase SinI	N/A
eggNOG-mapper	UHGV-0030039_29	1280689.AUJC01000011_gene1497	66.2	0.000000000000144	N/A	N/A
structural_annotation	UHGV-0030039_29	PF12728,TIGR01764	N/A	N/A	N/A	N/A
KOfam	UHGV-0030039_31	K18830	60.6	3.5e-17	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0030039_31	phrog_8	48.0	0.00000000000023	transcriptional regulator	transcription regulation
UniRef90	UHGV-0030039_31	UniRef90_R6X1Y8	176.0	0	Helix-turn-helix domain protein	N/A
eggNOG-mapper	UHGV-0030039_31	641107.CDLVIII_1309	87.8	8.7e-21	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0030039_31	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-0030039_31	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0030039_31	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0030039_33	K14059	125.6	6.3e-37	int; integrase	N/A
PHROG	UHGV-0030039_33	phrog_1	140.7	1.29998e-41	integrase	integration and excision
UniRef90	UHGV-0030039_33	UniRef90_R6X1Y3	672.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0030039_33	1123288.SOV_2c10320	335.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0030039_33	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0030039_33	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0030039_33	PF00589,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-0030039_34	UniRef90_A0A7M1RS47	95.5	3.3e-22	RNA polymerase sigma factor/ubiquitin-like protein	N/A
structural_annotation	UHGV-0030039_35	PF18573,NF033147	N/A	N/A	N/A	N/A
UniRef90	UHGV-0030039_40	UniRef90_A0A316S6W0	102.0	8.78e-27	HTH luxR-type domain-containing protein	N/A
Pfam	UHGV-0030039_40	PF00196	N/A	N/A	Bacterial regulatory proteins, luxR family	GerE
COG	UHGV-0030039_40	COG1595	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	N/A
structural_annotation	UHGV-0030039_40	PF08281,MF_00674,NF001073,COG2739	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0030039_42	1392502.JNIO01000008_gene1280	219.0	0	N/A	N/A
structural_annotation	UHGV-0030039_42	PF21277	N/A	N/A	N/A	N/A
PHROG	UHGV-0030039_44	phrog_4105	82.8	2.9e-24	N/A	unknown function
eggNOG-mapper	UHGV-0030039_44	33035.JPJF01000043_gene996	78.6	3.07e-17	N/A	N/A
PHROG	UHGV-0030039_45	phrog_3811	63.7	2.5e-18	N/A	unknown function
UniRef90	UHGV-0030039_45	UniRef90_A0A1Q6R2G9	210.0	0	N/A	N/A
eggNOG-mapper	UHGV-0030039_45	520709.F985_01945	58.9	0.0000000164	N/A	N/A
Pfam	UHGV-0030039_45	PF14301	N/A	N/A	N/A	DUF4376
structural_annotation	UHGV-0030039_45	PF14301,COG1382	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0030039_46	PF08948	N/A	N/A	N/A	N/A
PHROG	UHGV-0030039_47	phrog_1640	60.7	2.8e-17	tail protein	tail
eggNOG-mapper	UHGV-0030039_47	1123288.SOV_1c10770	85.1	0.0000000000000293	Right handed beta helix region	N/A
COG	UHGV-0030039_47	COG5434	N/A	N/A	Polygalacturonase	N/A
structural_annotation	UHGV-0030039_47	PF03906	N/A	N/A	N/A	N/A
PHROG	UHGV-0030039_49	phrog_9880	237.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0030039_49	557598.LHK_01554	118.0	2.73e-24	purine ribonucleoside salvage	N/A
COG	UHGV-0030039_49	COG0503	N/A	N/A	Adenine/guanine phosphoribosyltransferase or related PRPP-binding protein	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0030039	Yes	28,637	44	61	1