vOTU vOTU-119132

vOTU: vOTU-119132

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-119132
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-01121 → vGENUS-01065 → vOTU-119132
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae
Host range breadth	Family
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0439206
Biosample ID	SAMEA3323747
Genome length (bp)	25,542 bps
CheckV completeness	73.82% (Medium-quality)
CDS count	48
CDS density	89.05%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Christensenellales → CAG-138 → Phil1 → Phil1 sp001940855	Total connections	2	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae	Total connections	10	Host agreement	70

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 73.82)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0439206_1	phrog_23464	67.8	1.4e-19	N/A	unknown function
eggNOG-mapper	UHGV-0439206_1	33035.JPJF01000023_gene3232	164.0	3.30999e-40	phage tail tape measure protein	N/A
COG	UHGV-0439206_1	COG5412	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-0439206_2	phrog_33	76.7	5.3e-22	distal tail protein Dit	tail
UniRef90	UHGV-0439206_2	UniRef90_A0A173Z1X4	204.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0439206_2	1497679.EP56_07715	134.0	5.15e-36	tail component	N/A
Pfam	UHGV-0439206_2	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
COG	UHGV-0439206_2	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0439206_2	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0439206_7	phrog_1067	369.7	0	minor head protein	head and packaging
UniRef90	UHGV-0439206_7	UniRef90_A0A1C6FHB3	1118.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0439206_7	1123263.AUKY01000068_gene489	360.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0439206_7	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0439206_7	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0439206_7	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0439206_7	PF14594,PF13884,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0439206_8	phrog_19280	40.1	0.000000000022	N/A	unknown function
eggNOG-mapper	UHGV-0439206_8	1003200.AXXA_07630	61.2	0.000000693	N/A	N/A
structural_annotation	UHGV-0439206_8	PF10651	N/A	N/A	N/A	N/A
KOfam	UHGV-0439206_11	K01447	57.1	3.6e-16	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0439206_11	phrog_7698	189.7	0	endolysin	lysis
UniRef90	UHGV-0439206_11	UniRef90_A0A1C6GY80	616.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0439206_11	293826.Amet_2548	246.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0439206_11	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0439206_11	COG3023	N/A	N/A	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	N/A
structural_annotation	UHGV-0439206_11	PF01510,PF01476,PF15591,MF_02014,MF_04111,MF_01354,NF008758,NF010723,TIGR00405,COG3023,COG5004,COG2139	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0439206_12	1232443.BAIA02000106_gene3111	69.3	0.0000000000000937	N/A	N/A
PHROG	UHGV-0439206_14	phrog_1281	117.3	8e-35	N/A	unknown function
UniRef90	UHGV-0439206_14	UniRef90_UPI0018AB8273	298.0	0	N/A	N/A
eggNOG-mapper	UHGV-0439206_14	411459.RUMOBE_01368	145.0	9.20653e-43	Phage-associated protein	N/A
Pfam	UHGV-0439206_14	PF13274	N/A	N/A	Antitoxin SocA-like, Panacea domain	SocA_Panacea
COG	UHGV-0439206_14	COG3600	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0439206_14	PF13274,COG3600	N/A	N/A	N/A	N/A
KOfam	UHGV-0439206_17	K14059	227.3	0	int; integrase	N/A
PHROG	UHGV-0439206_17	phrog_1	220.9	0	integrase	integration and excision
UniRef90	UHGV-0439206_17	UniRef90_A0A1C5SM44	687.0	0	Tyrosine recombinase XerC	N/A
eggNOG-mapper	UHGV-0439206_17	643648.Slip_1975	231.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0439206_17	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0439206_17	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0439206_17	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0439206_17	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-0439206_18	UniRef90_A0A328UBY0	649.0	0	Cell filamentation protein Fic	N/A
eggNOG-mapper	UHGV-0439206_18	1035196.HMPREF9998_00638	501.0	0	Virulence protein RhuM family	N/A
Pfam	UHGV-0439206_18	PF13310	N/A	N/A	Virulence protein RhuM family	Virulence_RhuM
COG	UHGV-0439206_18	COG3943	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0439206_18	PF13310,TIGR02681,COG3943	N/A	N/A	N/A	N/A
PHROG	UHGV-0439206_19	phrog_87	80.3	1.8e-23	metallo-protease	other
UniRef90	UHGV-0439206_19	UniRef90_A0A328UD06	277.0	0	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-0439206_19	428125.CLOLEP_02739	153.0	0	N/A	N/A
Pfam	UHGV-0439206_19	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-0439206_19	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0439206_19	PF06114,COG2856	N/A	N/A	N/A	N/A
KOfam	UHGV-0439206_20	K22300	50.7	0.00000000000004	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0439206_20	phrog_8	72.1	1.1e-20	transcriptional regulator	transcription regulation
UniRef90	UHGV-0439206_20	UniRef90_A0A1C5SMG1	230.0	0	Bifunctional HTH-domain containing protein/aminotransferase	N/A
eggNOG-mapper	UHGV-0439206_20	1121344.JHZO01000003_gene989	118.0	8.82e-33	PFAM helix-turn-helix domain protein	N/A
Pfam	UHGV-0439206_20	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0439206_20	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0439206_20	PF12844,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-0439206_21	UniRef90_A0A328UFC2	129.0	7.05e-38	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0439206_21	1048834.TC41_1895	47.8	0.00000221	sequence-specific DNA binding	N/A
Pfam	UHGV-0439206_21	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0439206_21	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0439206_21	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0439206_22	phrog_59	125.2	2.4e-37	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0439206_22	UniRef90_A0A1C5SM14	540.0	0	HNHc domain-containing protein	N/A
eggNOG-mapper	UHGV-0439206_22	861530.ALOZ01000074_gene990	134.0	1.15e-34	HNH endonuclease	N/A
PADLOC	UHGV-0439206_22	HEase_00016	50.2	0.00000000000006	homing endonuclease	RM
Pfam	UHGV-0439206_22	PF13392	N/A	N/A	HNH endonuclease	HNH_3
Pfam	UHGV-0439206_22	PF04297	N/A	N/A	Putative helix-turn-helix protein, YlxM / p13 like	UPF0122
structural_annotation	UHGV-0439206_22	PF08281,PF13392,MF_00245,NF001066,COG2771	N/A	N/A	N/A	N/A
PHROG	UHGV-0439206_25	phrog_643	58.7	8.1e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-0439206_25	UniRef90_A0A3D3W9H5	52.4	0.000000253	Aspartate ammonia-lyase	N/A
eggNOG-mapper	UHGV-0439206_25	226185.EF_2851	54.3	0.00000000706	N/A	N/A
Pfam	UHGV-0439206_25	PF11195	N/A	N/A	N/A	DUF2829
structural_annotation	UHGV-0439206_25	PF11195	N/A	N/A	N/A	N/A
UniRef90	UHGV-0439206_26	UniRef90_A0A1C5P648	207.0	0	YjcQ protein	N/A
eggNOG-mapper	UHGV-0439206_26	1118063.I7J6R8_9CAUD	57.0	0.00000000281	N/A	N/A
structural_annotation	UHGV-0439206_26	PF08679,MF_01177,NF038268,COG1846	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0439206_29	PF12728,TIGR01764,COG3311	N/A	N/A	N/A	N/A
PHROG	UHGV-0439206_31	phrog_21613	57.7	1.8e-16	N/A	unknown function
eggNOG-mapper	UHGV-0439206_31	1120998.AUFC01000030_gene2214	110.0	3.92e-28	N/A	N/A
PHROG	UHGV-0439206_32	phrog_1227	263.2	0	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0439206_32	UniRef90_A0A3D0X749	300.0	0	N/A	N/A
eggNOG-mapper	UHGV-0439206_32	887325.HMPREF0381_0097	268.0	0	N/A	N/A
Pfam	UHGV-0439206_32	PF12684	N/A	N/A	N/A	DUF3799
COG	UHGV-0439206_32	COG1074	N/A	N/A	3'-5' helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	N/A
structural_annotation	UHGV-0439206_32	PF12684,TIGR01896,COG4343	N/A	N/A	N/A	N/A
KOfam	UHGV-0439206_33	K03111	137.9	1.10001e-40	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0439206_33	phrog_44	142.7	2.10055e-42	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0439206_33	UniRef90_A0A328UCX8	258.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0439206_33	1105031.HMPREF1141_2832	190.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0439206_33	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0439206_33	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0439206_33	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0439206_33	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0439206_33	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0439206_34	PF21715	N/A	N/A	N/A	N/A
PHROG	UHGV-0439206_35	phrog_15768	97.2	1.4e-28	N/A	unknown function
UniRef90	UHGV-0439206_35	UniRef90_A0A416HMA1	89.4	5.08e-18	N/A	N/A
eggNOG-mapper	UHGV-0439206_35	1095750.HMPREF9970_1674	152.0	2.3794e-42	N/A	N/A
structural_annotation	UHGV-0439206_35	PF01978,MF_01819,NF041413,COG0735	N/A	N/A	N/A	N/A
PHROG	UHGV-0439206_36	phrog_190	101.6	6e-30	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0439206_36	UniRef90_A0A7V6W6S0	131.0	1.49e-37	N/A	N/A
eggNOG-mapper	UHGV-0439206_36	348824.LPU83_2000	80.9	3.19e-18	N/A	N/A
Pfam	UHGV-0439206_36	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0439206_36	PF06356,MF_04160,NF033179	N/A	N/A	N/A	N/A
PHROG	UHGV-0439206_37	phrog_13890	58.8	8.7e-21	N/A	unknown function
UniRef90	UHGV-0439206_37	UniRef90_A0A6N9P941	70.5	0.0000000000000921	Antitoxin	N/A
eggNOG-mapper	UHGV-0439206_37	1507.HMPREF0262_00298	57.8	0.00000000163	N/A	N/A
Pfam	UHGV-0439206_37	PF08681	N/A	N/A	N/A	DUF1778
PHROG	UHGV-0439206_39	phrog_111	160.0	0	DNA methyltransferase	other
UniRef90	UHGV-0439206_39	UniRef90_A0A1C6GCR8	336.0	0	Phage N-6-adenine-methyltransferase	N/A
eggNOG-mapper	UHGV-0439206_39	445972.ANACOL_03344	208.0	0	DNA N-6-adenine-methyltransferase (Dam)	N/A
PADLOC	UHGV-0439206_39	oMTase_00015	174.1	0	orphan methyltransferase	RM
Pfam	UHGV-0439206_39	PF05869	N/A	N/A	DNA N-6-adenine-methyltransferase (Dam)	Dam
structural_annotation	UHGV-0439206_39	PF05869,TIGR01712,COG0338	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0439206_40	PF19157	N/A	N/A	N/A	N/A
UniRef90	UHGV-0439206_43	UniRef90_A0A8D9PDK2	60.8	0.000000000305	Zinc-ribbon containing domain	N/A
UniRef90	UHGV-0439206_44	UniRef90_A0A1C6EY73	278.0	0	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0439206_44	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0439206_44	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
PHROG	UHGV-0439206_45	phrog_36	60.4	3.6e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-0439206_45	UniRef90_UPI00189CA0E1	141.0	6.37997e-41	RNA polymerase subunit sigma-24	N/A
eggNOG-mapper	UHGV-0439206_45	1540257.JQMW01000004_gene433	125.0	1.86e-35	N/A	N/A
structural_annotation	UHGV-0439206_45	PF02996	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0439206_46	PF04606	N/A	N/A	N/A	N/A
PHROG	UHGV-0439206_48	phrog_119	48.6	0.00000000000011	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0439206_48	UniRef90_A0A1C6FFC2	165.0	0	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-0439206_48	1027396.LMOSA_21361	61.2	0.000000000031	HNH nucleases	N/A
COG	UHGV-0439206_48	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0439206	Yes	25,542	46	74	1
UHGV-1347528	No	25,542	46	74	1