vOTU vOTU-119369

vOTU: vOTU-119369

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-119369
Number of genomes	1
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00007 → vSUBFAM-03066 → vGENUS-19728 → vOTU-119369
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Lachnospira
Host range breadth	Genus
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1449207
Biosample ID	N/A
Genome length (bp)	37,117 bps
CheckV completeness	64.26% (Medium-quality)
CDS count	65
CDS density	82.39%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Lachnospira	Total connections	563	Host agreement	83.3
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 64.26)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1449207_1	K07486	74.9	1.3e-21	K07486; transposase	N/A
PHROG	UHGV-1449207_1	phrog_2199	109.1	4.3e-32	transposase	integration and excision
UniRef90	UHGV-1449207_1	UniRef90_C0B7Y6	444.0	0	DEDD_Tnp_IS110 domain-containing protein	N/A
eggNOG-mapper	UHGV-1449207_1	742765.HMPREF9457_03059	444.0	0	COG COG3547 Transposase and inactivated derivatives	N/A
Pfam	UHGV-1449207_1	PF01548	N/A	N/A	Transposase	DEDD_Tnp_IS110
COG	UHGV-1449207_1	COG3547	N/A	N/A	Transposase	N/A
structural_annotation	UHGV-1449207_1	PF01548,MF_00651,NF033542,COG3547	N/A	N/A	N/A	N/A
PHROG	UHGV-1449207_2	phrog_22292	100.5	1.2e-29	N/A	unknown function
PHROG	UHGV-1449207_3	phrog_20593	42.4	0.000000000005	N/A	unknown function
eggNOG-mapper	UHGV-1449207_4	568816.Acin_1246	61.6	0.000000000296	N/A	N/A
PHROG	UHGV-1449207_5	phrog_7839	65.1	9.7e-19	N/A	unknown function
eggNOG-mapper	UHGV-1449207_5	1410650.JHWL01000003_gene2844	94.0	7.71e-23	N/A	N/A
structural_annotation	UHGV-1449207_5	PF08860	N/A	N/A	N/A	N/A
UniRef90	UHGV-1449207_6	UniRef90_UPI000CF8F0F1	199.0	0	N/A	N/A
eggNOG-mapper	UHGV-1449207_6	536233.CLO_1542	77.0	2.04e-16	N/A	N/A
Pfam	UHGV-1449207_6	PF07866	N/A	N/A	N/A	DUF1653
COG	UHGV-1449207_6	COG4728	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1449207_6	PF07866,COG4728	N/A	N/A	N/A	N/A
PHROG	UHGV-1449207_8	phrog_15198	45.4	0.00000000000075	N/A	unknown function
UniRef90	UHGV-1449207_8	UniRef90_UPI00040CBFF3	124.0	1.15e-33	N/A	N/A
eggNOG-mapper	UHGV-1449207_8	742723.HMPREF9477_00919	53.1	0.00000102	N/A	N/A
Pfam	UHGV-1449207_8	PF04448	N/A	N/A	N/A	DUF551
PHROG	UHGV-1449207_11	phrog_7024	59.2	5.2e-17	N/A	unknown function
KOfam	UHGV-1449207_12	K19666	41.2	0.000000000023	solR, cepR, tofR; LuxR family transcriptional regulator, quorum-sensing system regulator SolR	N/A
UniRef90	UHGV-1449207_12	UniRef90_UPI001D05EDA5	73.6	8.16e-16	LuxR C-terminal-related transcriptional regulator	N/A
Pfam	UHGV-1449207_12	PF00196	N/A	N/A	Bacterial regulatory proteins, luxR family	GerE
structural_annotation	UHGV-1449207_12	PF00196,MF_00245,NF001067,COG2771	N/A	N/A	N/A	N/A
KOfam	UHGV-1449207_14	K06400	313.5	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1449207_14	phrog_95	316.4	0	integrase	integration and excision
UniRef90	UHGV-1449207_14	UniRef90_UPI001D084942	681.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-1449207_14	1384065.JAGS01000001_gene1134	265.0	0	N/A	N/A
Pfam	UHGV-1449207_14	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1449207_14	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-1449207_14	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-1449207_14	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1449207_14	PF00239,PF07508,NF041201,COG1961	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1449207_15	658655.HMPREF0988_00920	54.3	0.00000000265	N/A	N/A
eggNOG-mapper	UHGV-1449207_16	658655.HMPREF0988_00919	112.0	3.41e-29	N/A	N/A
structural_annotation	UHGV-1449207_16	NF033819	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1449207_17	658655.HMPREF0988_00918	74.3	1.05e-16	N/A	N/A
PHROG	UHGV-1449207_18	phrog_16490	202.8	0	N/A	unknown function
eggNOG-mapper	UHGV-1449207_18	397290.C810_01328	242.0	0	N/A	N/A
PHROG	UHGV-1449207_19	phrog_20016	200.1	0	N/A	unknown function
UniRef90	UHGV-1449207_19	UniRef90_A0A285PT46	158.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-1449207_19	397290.C810_05214	176.0	0	N/A	N/A
structural_annotation	UHGV-1449207_19	PF18573,NF033147	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1449207_20	658655.HMPREF0988_00915	140.0	2.04e-38	N/A	N/A
UniRef90	UHGV-1449207_24	UniRef90_A0A3S1E765	75.1	0.00000000000058	Zinc ribbon domain-containing protein	N/A
eggNOG-mapper	UHGV-1449207_24	1235802.C823_04880	65.5	0.000000000402	N/A	N/A
UniRef90	UHGV-1449207_25	UniRef90_V2YAR1	56.6	0.00000000214	RHH_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-1449207_25	1378168.N510_02331	56.6	0.00000000036	Ribbon-helix-helix protein, copG family	N/A
structural_annotation	UHGV-1449207_25	PF01402,NF041793,COG3905	N/A	N/A	N/A	N/A
PHROG	UHGV-1449207_27	phrog_4608	145.2	4.59626e-43	anti-repressor	transcription regulation
UniRef90	UHGV-1449207_27	UniRef90_F7JKF7	214.0	0	ORF6N domain-containing protein	N/A
eggNOG-mapper	UHGV-1449207_27	658655.HMPREF0988_00907	214.0	0	ORF6N domain	N/A
Pfam	UHGV-1449207_27	PF10543	N/A	N/A	ORF6N domain	ORF6N
structural_annotation	UHGV-1449207_27	PF10543,TIGR02681,COG3646	N/A	N/A	N/A	N/A
PHROG	UHGV-1449207_28	phrog_1233	48.8	0.00000000000011	N/A	unknown function
UniRef90	UHGV-1449207_28	UniRef90_A0A345BPX6	87.0	4.25e-20	Metal-dependent hydrolase	N/A
eggNOG-mapper	UHGV-1449207_28	658655.HMPREF0988_00914	112.0	7.6e-31	N/A	N/A
PHROG	UHGV-1449207_30	phrog_130	192.7	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-1449207_30	UniRef90_R5RTD8	370.0	0	Bro-N domain-containing protein	N/A
eggNOG-mapper	UHGV-1449207_30	658655.HMPREF0988_00912	301.0	0	Phage antirepressor protein KilAC domain	N/A
Pfam	UHGV-1449207_30	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-1449207_30	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-1449207_30	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-1449207_30	PF03374,PF02498,COG3645	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1449207_33	397290.C810_01347	49.7	0.000000298	N/A	N/A
structural_annotation	UHGV-1449207_33	PF18267	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1449207_34	PF09939,COG1532	N/A	N/A	N/A	N/A
UniRef90	UHGV-1449207_36	UniRef90_A0A0V8QAV2	94.7	3.41e-24	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1449207_36	1280679.ATVX01000032_gene28	72.0	5.65e-16	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-1449207_36	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-1449207_36	PF13560,NF000090,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-1449207_37	phrog_31631	40.2	0.00000000004	N/A	unknown function
eggNOG-mapper	UHGV-1449207_38	97139.C824_02675	51.2	0.0000000161	N/A	N/A
UniRef90	UHGV-1449207_39	UniRef90_W1I754	47.0	0.00000364	Uncultured bacterium plasmid pRGI00522	N/A
eggNOG-mapper	UHGV-1449207_40	658655.HMPREF0988_00895	137.0	1.15e-38	N/A	N/A
PHROG	UHGV-1449207_41	phrog_1233	86.0	4.2e-25	N/A	unknown function
UniRef90	UHGV-1449207_41	UniRef90_UPI001C39EFB9	138.0	5.4e-40	Dienelactone hydrolase family protein	N/A
eggNOG-mapper	UHGV-1449207_41	357809.Cphy_2967	106.0	4.23e-28	N/A	N/A
KOfam	UHGV-1449207_43	K07741	77.4	4.5e-22	antB; anti-repressor protein	N/A
PHROG	UHGV-1449207_43	phrog_130	213.6	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-1449207_43	UniRef90_UPI001BC68D0E	373.0	0	Phage antirepressor KilAC domain-containing protein	N/A
eggNOG-mapper	UHGV-1449207_43	796940.HMPREF9628_02201	214.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-1449207_43	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-1449207_43	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-1449207_43	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-1449207_43	PF02498,PF03374,TIGR02681,COG3617	N/A	N/A	N/A	N/A
PHROG	UHGV-1449207_44	phrog_229	130.9	8.3e-39	MazG-like pyrophosphatase	other
UniRef90	UHGV-1449207_44	UniRef90_D7GNT7	141.0	2.59997e-41	MazG nucleotide pyrophosphohydrolase domain	N/A
eggNOG-mapper	UHGV-1449207_44	428125.CLOLEP_01391	125.0	1.01e-35	MazG nucleotide pyrophosphohydrolase domain	N/A
Pfam	UHGV-1449207_44	PF03819	N/A	N/A	MazG nucleotide pyrophosphohydrolase domain	MazG
COG	UHGV-1449207_44	COG1694	N/A	N/A	NTP pyrophosphatase, house-cleaning of non-canonical NTPs	N/A
structural_annotation	UHGV-1449207_44	PF03819,MF_01020,NF001613,COG0140	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1449207_47	PF05225,COG2886	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1449207_49	469596.HMPREF9488_03215	71.6	0.0000000000000391	N/A	N/A
structural_annotation	UHGV-1449207_49	PF16475	N/A	N/A	N/A	N/A
PHROG	UHGV-1449207_50	phrog_38	143.2	1.80067e-42	terminase large subunit	head and packaging
UniRef90	UHGV-1449207_50	UniRef90_A0A352SH30	969.0	0	Terminase_6C domain-containing protein	N/A
eggNOG-mapper	UHGV-1449207_50	397290.C810_01390	688.0	0	chromosome segregation	N/A
Pfam	UHGV-1449207_50	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
COG	UHGV-1449207_50	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1449207_50	PF17289,PF04466,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
PHROG	UHGV-1449207_51	phrog_36	69.5	5.7e-20	transcriptional regulator	transcription regulation
UniRef90	UHGV-1449207_51	UniRef90_A0A352SH29	109.0	1.82e-28	RNA polymerase subunit sigma-70 (Fragment)	N/A
eggNOG-mapper	UHGV-1449207_51	97138.C820_00772	85.1	3.38e-19	sigma factor activity	N/A
COG	UHGV-1449207_51	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-1449207_51	PF07374,MF_00674,NF008895,COG1191	N/A	N/A	N/A	N/A
PHROG	UHGV-1449207_52	phrog_64	135.2	3.5e-40	portal protein	head and packaging
UniRef90	UHGV-1449207_52	UniRef90_A0A8D9PG58	1035.0	0	Portal protein	N/A
eggNOG-mapper	UHGV-1449207_52	397290.C810_01397	459.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1449207_52	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1449207_52	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1449207_54	phrog_544	279.3	0	major head protein	head and packaging
UniRef90	UHGV-1449207_54	UniRef90_A0A8D9PGL1	633.0	0	Major capsid protein	N/A
eggNOG-mapper	UHGV-1449207_54	608534.GCWU000341_02293	335.0	0	N/A	N/A
NCBIFam	UHGV-1449207_54	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-1449207_54	PF05065,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-1449207_55	UniRef90_A0A8D9UIY7	171.0	0	Rho termination factor	N/A
structural_annotation	UHGV-1449207_55	PF21169	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1449207_56	397290.C810_01402	71.2	0.0000000000000249	N/A	N/A
eggNOG-mapper	UHGV-1449207_57	411468.CLOSCI_01509	66.6	0.000000000000765	N/A	N/A
PHROG	UHGV-1449207_58	phrog_1129	72.8	3.1e-21	holin	lysis
UniRef90	UHGV-1449207_58	UniRef90_A0A416G2E0	145.0	9.52883e-44	Enolase	N/A
eggNOG-mapper	UHGV-1449207_58	411461.DORFOR_00721	107.0	1.97e-29	N/A	N/A
Pfam	UHGV-1449207_58	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1449207_58	PF06946	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1449207_59	1298920.KI911353_gene2656	54.7	0.000000183	N/A	N/A
structural_annotation	UHGV-1449207_59	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
UniRef90	UHGV-1449207_60	UniRef90_UPI001BBD4500	81.3	4.11e-16	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1449207_60	1232453.BAIF02000058_gene1631	156.0	0	N/A	N/A
AcrCatalog	UHGV-1449207_60	cluster_24841	160.0	0	NA	N/A
structural_annotation	UHGV-1449207_61	PF05657	N/A	N/A	N/A	N/A
UniRef90	UHGV-1449207_62	UniRef90_R7BGF5	91.7	2.23e-20	Phage tail protein	N/A
structural_annotation	UHGV-1449207_62	PF16463,TIGR02126,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-1449207_63	UniRef90_UPI001D0975F6	101.0	1.52e-25	N/A	N/A
structural_annotation	UHGV-1449207_63	PF16478	N/A	N/A	N/A	N/A
KOfam	UHGV-1449207_65	K21473	46.2	0.00000000000075	ripA; peptidoglycan DL-endopeptidase RipA [EC:3.4.-.-]	N/A
PHROG	UHGV-1449207_65	phrog_1535	255.1	0	tail length tape measure protein	tail
UniRef90	UHGV-1449207_65	UniRef90_C0BA73	590.0	0	Transglycosylase SLT domain protein	N/A
eggNOG-mapper	UHGV-1449207_65	1232453.BAIF02000058_gene1637	270.0	0	phage tail tape measure protein	N/A
Pfam	UHGV-1449207_65	PF00877	N/A	N/A	NlpC/P60 family	NLPC_P60
COG	UHGV-1449207_65	COG5412	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1449207_65	NF012014	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1449207	Yes	37,117	38	64	1