vOTU vOTU-120112

vOTU: vOTU-120112

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-120112
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00248 → vGENUS-00598 → vOTU-120112
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Flavonifractor → Flavonifractor plautii
Host range breadth	Species
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0310546
Biosample ID	SAMN10285296
Genome length (bp)	29,935 bps
CheckV completeness	54.41% (Medium-quality)
CDS count	46
CDS density	85.72%
tRNA count	2
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Flavonifractor → Flavonifractor plautii	Total connections	21	Host agreement	95.24
PHIST-predicted host lineage	Bacteria → Firmicutes_A	Total connections	8	Host agreement	62.5

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 54.41)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0310546_1	phrog_22543	74.7	1.1e-21	N/A	unknown function
PHROG	UHGV-0310546_3	phrog_374	208.5	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0310546_3	1460635.JCM19038_3433	194.0	0	N/A	N/A
structural_annotation	UHGV-0310546_3	PF17375	N/A	N/A	N/A	N/A
PHROG	UHGV-0310546_4	phrog_1384	129.2	2.6e-38	Mom-like DNA modification protein	other
eggNOG-mapper	UHGV-0310546_4	428125.CLOLEP_01816	286.0	0	COG NOG12663 non supervised orthologous group	N/A
structural_annotation	UHGV-0310546_4	PF11124,MF_02210,NF040502,COG3818	N/A	N/A	N/A	N/A
PHROG	UHGV-0310546_5	phrog_474	46.8	0.00000000000077	phosphofructokinase	other
eggNOG-mapper	UHGV-0310546_5	428125.CLOLEP_01367	65.1	0.000000000000237	N/A	N/A
Pfam	UHGV-0310546_5	PF19905	N/A	N/A	N/A	DUF6378
PHROG	UHGV-0310546_7	phrog_924	49.4	0.000000000000085	N/A	unknown function
UniRef90	UHGV-0310546_7	UniRef90_A0A6I7G0Z3	149.0	2.8026e-45	N/A	N/A
Pfam	UHGV-0310546_7	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0310546_7	NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-0310546_8	phrog_8684	98.7	9.4e-30	N/A	unknown function
UniRef90	UHGV-0310546_8	UniRef90_A0A1C5WBP0	211.0	0	YopX protein	N/A
eggNOG-mapper	UHGV-0310546_8	1226322.HMPREF1545_00036	94.4	4.64e-23	YopX protein	N/A
Pfam	UHGV-0310546_8	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-0310546_8	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-0310546_8	PF09643,TIGR01671	N/A	N/A	N/A	N/A
UniRef90	UHGV-0310546_9	UniRef90_A0A1C5WAG7	181.0	0	Restriction alleviation protein, Lar family	N/A
Pfam	UHGV-0310546_9	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
structural_annotation	UHGV-0310546_9	PF14354	N/A	N/A	N/A	N/A
PHROG	UHGV-0310546_11	phrog_25385	64.1	2.2e-18	N/A	unknown function
eggNOG-mapper	UHGV-0310546_11	476272.RUMHYD_03328	84.0	9.52e-20	N/A	N/A
UniRef90	UHGV-0310546_14	UniRef90_A0A0F0C267	88.2	6.62e-18	HTH cro/C1-type domain-containing protein	N/A
structural_annotation	UHGV-0310546_14	PF16677	N/A	N/A	N/A	N/A
UniRef90	UHGV-0310546_15	UniRef90_UPI001959AABF	53.5	0.000000444	Lar family restriction alleviation protein	N/A
PHROG	UHGV-0310546_22	phrog_374	57.5	3.1e-16	HNH endonuclease	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0310546_22	742738.HMPREF9460_04058	225.0	0	N/A	N/A
structural_annotation	UHGV-0310546_22	PF10013,COG4338	N/A	N/A	N/A	N/A
UniRef90	UHGV-0310546_23	UniRef90_A0A810QB23	65.9	0.00000000000146	N/A	N/A
eggNOG-mapper	UHGV-0310546_23	155864.EDL933_3275	49.3	0.0000021	N/A	N/A
Pfam	UHGV-0310546_23	PF04448	N/A	N/A	N/A	DUF551
COG	UHGV-0310546_23	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0310546_23	PF04448,NF041588	N/A	N/A	N/A	N/A
Pfam	UHGV-0310546_24	PF00570	N/A	N/A	HRDC domain	HRDC
COG	UHGV-0310546_24	COG0514	N/A	N/A	Superfamily II DNA helicase RecQ	N/A
PHROG	UHGV-0310546_25	phrog_38	179.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-0310546_25	UniRef90_A0A810QA10	1013.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0310546_25	1298920.KI911353_gene2682	440.0	0	TIGRFAM Phage	N/A
COG	UHGV-0310546_25	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0310546_25	PF17289,PF04466,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0310546_26	COG4416	N/A	N/A	N/A	N/A
PHROG	UHGV-0310546_27	phrog_64	210.2	0	portal protein	head and packaging
UniRef90	UHGV-0310546_27	UniRef90_A0A845RCM8	541.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0310546_27	1123263.AUKY01000015_gene1609	370.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0310546_27	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0310546_27	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0310546_28	phrog_115	42.5	0.0000000000099	minor head protein	head and packaging
UniRef90	UHGV-0310546_28	UniRef90_A0A1C5WCC8	398.0	0	Phage head morphogenesis protein, SPP1 gp7 family	N/A
structural_annotation	UHGV-0310546_28	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0310546_29	phrog_59	138.9	1.79997e-41	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0310546_29	UniRef90_L0P6F5	156.0	5.60519e-45	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0310546_29	1206110.L0P6F5_9CAUD	156.0	1.4013e-45	sequence-specific DNA binding transcription factor activity	N/A
PADLOC	UHGV-0310546_29	HEase_00016	107.1	2.9e-31	homing endonuclease	RM
Pfam	UHGV-0310546_29	PF07463	N/A	N/A	NUMOD4 motif	NUMOD4
Pfam	UHGV-0310546_29	PF13392	N/A	N/A	HNH endonuclease	HNH_3
structural_annotation	UHGV-0310546_29	PF07463,PF07453,TIGR01453	N/A	N/A	N/A	N/A
PHROG	UHGV-0310546_31	phrog_909	44.6	0.0000000000018	major head protein	head and packaging
PHROG	UHGV-0310546_32	phrog_29	198.5	0	major head protein	head and packaging
UniRef90	UHGV-0310546_32	UniRef90_A0A7X5DZ98	561.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0310546_32	1347368.HG964404_gene4993	295.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-0310546_32	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-0310546_32	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0310546_33	1226322.HMPREF1545_00051	174.0	0	N/A	N/A
UniRef90	UHGV-0310546_35	UniRef90_A0A845R6M6	146.0	7.9874e-44	DNA-packaging protein	N/A
structural_annotation	UHGV-0310546_35	TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0310546_36	phrog_1233	82.6	5.5e-24	N/A	unknown function
eggNOG-mapper	UHGV-0310546_36	1232443.BAIA02000078_gene33	159.0	0	N/A	N/A
PHROG	UHGV-0310546_37	phrog_5	42.1	0.00000000002	tail completion or Neck1 protein	connector
UniRef90	UHGV-0310546_37	UniRef90_A0A7C7ERK4	142.0	2.32e-40	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0310546_37	397290.C810_01411	105.0	2.62e-26	N/A	N/A
structural_annotation	UHGV-0310546_37	PF17395,TIGR01725,COG5005	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0310546_38	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-0310546_39	phrog_158	43.5	0.0000000000052	major tail protein	tail
eggNOG-mapper	UHGV-0310546_39	469596.HMPREF9488_01310	172.0	0	N/A	N/A
structural_annotation	UHGV-0310546_39	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-0310546_40	UniRef90_A0A845R9E6	133.0	6.93e-38	N/A	N/A
Pfam	UHGV-0310546_40	PF16478	N/A	N/A	N/A	DUF5055
structural_annotation	UHGV-0310546_40	PF16478	N/A	N/A	N/A	N/A
PHROG	UHGV-0310546_43	phrog_1535	113.3	2e-33	tail length tape measure protein	tail
UniRef90	UHGV-0310546_43	UniRef90_A0A1C6L0H4	261.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0310546_43	1121866.AUGK01000003_gene1437	203.0	0	phage tail tape measure protein	N/A
COG	UHGV-0310546_43	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
PHROG	UHGV-0310546_44	phrog_1194	65.6	7.1e-19	N/A	unknown function
eggNOG-mapper	UHGV-0310546_44	394503.Ccel_3034	73.6	0.00000000000000346	N/A	N/A
structural_annotation	UHGV-0310546_44	PF20458,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0310546_45	phrog_32744	973.6	0	N/A	unknown function
eggNOG-mapper	UHGV-0310546_45	1120998.AUFC01000030_gene2247	221.0	0	N/A	N/A
structural_annotation	UHGV-0310546_45	PF14594,PF21722,NF033848,COG4379	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0310546	Yes	29,935	48	54	1