vOTU vOTU-120196

vOTU: vOTU-120196

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-120196
Number of genomes	1
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-02121 → vGENUS-03885 → vOTU-120196
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae
Host range breadth	Family
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0016204
Biosample ID	N/A
Genome length (bp)	36,252 bps
CheckV completeness	79.43% (Medium-quality)
CDS count	57
CDS density	91.35%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae	Total connections	47	Host agreement	95.74
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 79.43)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0016204_1	UniRef90_A0A843GWV6	119.0	6.18e-33	Rubrerythrin domain-containing protein	N/A
UniRef90	UHGV-0016204_2	UniRef90_A0A345BNU6	53.5	0.00000267	Spore surface glycoprotein	N/A
structural_annotation	UHGV-0016204_2	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0016204_3	phrog_16490	56.5	6.5e-16	N/A	unknown function
eggNOG-mapper	UHGV-0016204_3	476272.RUMHYD_01770	64.3	0.000000000649	N/A	N/A
PHROG	UHGV-0016204_4	phrog_22984	52.6	0.0000000000000087	N/A	unknown function
structural_annotation	UHGV-0016204_6	PF04545,MF_00674,NF008895,COG1342	N/A	N/A	N/A	N/A
UniRef90	UHGV-0016204_8	UniRef90_A0A6N3FXW7	140.0	9.03978e-42	Helix-turn-helix	N/A
eggNOG-mapper	UHGV-0016204_8	742738.HMPREF9460_04059	69.7	0.0000000000000832	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0016204_8	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0016204_8	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0016204_8	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0016204_9	K01448	75.2	9.6e-22	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0016204_9	phrog_435	88.2	1.1e-25	endolysin	lysis
UniRef90	UHGV-0016204_9	UniRef90_A0A810PUG7	172.0	0	SPOR domain-containing protein	N/A
eggNOG-mapper	UHGV-0016204_9	697281.Mahau_0053	139.0	3.82e-38	n-acetylmuramoyl-l-alanine amidase	N/A
Pfam	UHGV-0016204_9	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-0016204_9	PF05036	N/A	N/A	SPOR domain	SPOR
COG	UHGV-0016204_9	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0016204_9	PF01520,MF_00562,TIGR02883,COG0860	N/A	N/A	N/A	N/A
PHROG	UHGV-0016204_10	phrog_1129	69.8	2.7e-20	holin	lysis
UniRef90	UHGV-0016204_10	UniRef90_A0A8D9PDD4	141.0	7.86969e-42	Holin	N/A
eggNOG-mapper	UHGV-0016204_10	1007096.BAGW01000036_gene2663	107.0	3.17e-29	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0016204_10	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0016204_10	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0016204_11	phrog_4105	98.8	3.4e-29	N/A	unknown function
UniRef90	UHGV-0016204_11	UniRef90_A0A8D9UHA9	177.0	0	Holin protein	N/A
eggNOG-mapper	UHGV-0016204_11	742733.HMPREF9469_05011	135.0	4.17e-40	N/A	N/A
PHROG	UHGV-0016204_12	phrog_30034	105.9	4.9e-31	N/A	unknown function
UniRef90	UHGV-0016204_12	UniRef90_A0A3D1XGA4	209.0	0	Chitin-binding type-3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0016204_12	1122971.BAME01000151_gene6566	100.0	7.59e-24	N/A	N/A
PHROG	UHGV-0016204_13	phrog_25979	94.9	1.9e-28	N/A	unknown function
eggNOG-mapper	UHGV-0016204_13	1151292.QEW_0665	73.2	0.0000000000842	N/A	N/A
structural_annotation	UHGV-0016204_13	PF16706	N/A	N/A	N/A	N/A
PHROG	UHGV-0016204_14	phrog_2295	66.8	2e-20	N/A	unknown function
Pfam	UHGV-0016204_14	PF21722	N/A	N/A	Glycine-rich domain	Gly_rich_2
structural_annotation	UHGV-0016204_14	PF21722	N/A	N/A	N/A	N/A
KOfam	UHGV-0016204_15	K16628	63.5	8e-19	COL7A; collagen type VII alpha	N/A
PHROG	UHGV-0016204_15	phrog_3904	64.2	2e-26	tail fiber protein	tail
eggNOG-mapper	UHGV-0016204_15	1203606.HMPREF1526_02029	79.0	0.000000000000072	Collagen triple helix repeat (20 copies)	N/A
Pfam	UHGV-0016204_15	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-0016204_15	COG1409	N/A	N/A	3',5'-cyclic AMP phosphodiesterase CpdA	N/A
structural_annotation	UHGV-0016204_16	PF21683	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0016204_17	509191.AEDB02000018_gene213	58.9	0.0000000939	Peptidase_C39 like family	N/A
structural_annotation	UHGV-0016204_17	PF05543,NF033920	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0016204_18	PF20377	N/A	N/A	N/A	N/A
PHROG	UHGV-0016204_19	phrog_6616	85.9	1e-26	tail protein	tail
eggNOG-mapper	UHGV-0016204_19	1294142.CINTURNW_1042	68.6	0.00000000766	Phage minor structural protein	N/A
COG	UHGV-0016204_19	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0016204_19	PF07902,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0016204_20	phrog_1194	72.8	4.1e-21	N/A	unknown function
UniRef90	UHGV-0016204_20	UniRef90_A0A8D9PDT1	146.0	8.08549e-43	YolD-like protein	N/A
eggNOG-mapper	UHGV-0016204_20	483218.BACPEC_01144	102.0	5.61e-26	N/A	N/A
Pfam	UHGV-0016204_20	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0016204_20	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0016204_21	phrog_1535	173.8	0	tail length tape measure protein	tail
UniRef90	UHGV-0016204_21	UniRef90_A0A8D9PDW4	219.0	0	Minor tail protein	N/A
eggNOG-mapper	UHGV-0016204_21	1121866.AUGK01000003_gene1437	300.0	0	phage tail tape measure protein	N/A
COG	UHGV-0016204_21	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
eggNOG-mapper	UHGV-0016204_22	1121333.JMLH01000047_gene1011	87.4	5.26e-20	N/A	N/A
UniRef90	UHGV-0016204_23	UniRef90_UPI00164D364F	117.0	4.77e-32	N/A	N/A
eggNOG-mapper	UHGV-0016204_23	1123263.AUKY01000015_gene1618	76.6	1.19e-16	N/A	N/A
Pfam	UHGV-0016204_23	PF16478	N/A	N/A	N/A	DUF5055
structural_annotation	UHGV-0016204_23	PF16478	N/A	N/A	N/A	N/A
PHROG	UHGV-0016204_24	phrog_158	53.5	0.0000000000000045	major tail protein	tail
UniRef90	UHGV-0016204_24	UniRef90_A0A1C6L0H9	220.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0016204_24	1232453.BAIF02000058_gene1634	96.3	1.43e-23	N/A	N/A
Pfam	UHGV-0016204_24	PF08813	N/A	N/A	Phage tail tube protein, TTP	Phage_tail_3
structural_annotation	UHGV-0016204_24	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0016204_25	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0016204_26	397290.C810_01411	58.2	0.000000036	N/A	N/A
eggNOG-mapper	UHGV-0016204_27	1298920.KI911353_gene2656	80.5	1.13e-17	N/A	N/A
UniRef90	UHGV-0016204_28	UniRef90_UPI00164E20D5	161.0	0	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-0016204_28	1298920.KI911353_gene2658	59.7	0.00000000037	N/A	N/A
Pfam	UHGV-0016204_28	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-0016204_28	TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0016204_29	phrog_1328	128.3	4.7e-38	major head protein	head and packaging
UniRef90	UHGV-0016204_29	UniRef90_UPI00164DD2D5	577.0	0	N/A	N/A
eggNOG-mapper	UHGV-0016204_29	665956.HMPREF1032_03619	241.0	0	N/A	N/A
Pfam	UHGV-0016204_29	PF17236	N/A	N/A	N/A	DUF5309
structural_annotation	UHGV-0016204_29	PF17236,MF_04119,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0016204_31	phrog_64	225.1	0	portal protein	head and packaging
UniRef90	UHGV-0016204_31	UniRef90_UPI001C02F349	767.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0016204_31	1123263.AUKY01000015_gene1609	426.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0016204_31	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0016204_31	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0016204_32	phrog_38	181.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-0016204_32	UniRef90_A0A810QA10	663.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0016204_32	1298920.KI911353_gene2682	498.0	0	TIGRFAM Phage	N/A
COG	UHGV-0016204_32	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0016204_32	PF17289,PF04466,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
PHROG	UHGV-0016204_33	phrog_26910	58.6	1e-16	N/A	unknown function
KOfam	UHGV-0016204_34	K06400	200.3	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0016204_34	phrog_95	195.1	0	integrase	integration and excision
UniRef90	UHGV-0016204_34	UniRef90_UPI00164DD5BB	445.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-0016204_34	697329.Rumal_3466	350.0	0	resolvase	N/A
Pfam	UHGV-0016204_34	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0016204_34	PF07508	N/A	N/A	Recombinase	Recombinase
COG	UHGV-0016204_34	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0016204_34	PF00239,PF07508,NF041201,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-0016204_38	phrog_6244	53.7	0.0000000000000052	N/A	unknown function
eggNOG-mapper	UHGV-0016204_38	1354300.AUQY01000005_gene215	117.0	2.19e-33	N/A	N/A
PHROG	UHGV-0016204_41	phrog_606	56.8	2.4e-16	terminase small subunit	head and packaging
UniRef90	UHGV-0016204_41	UniRef90_UPI001D08D6B6	227.0	0	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-0016204_41	536233.CLO_1560	70.1	0.000000000000725	DNA-packaging protein gp3	N/A
Pfam	UHGV-0016204_41	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-0016204_41	PF16677	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0016204_42	PF07486,TIGR02869,COG3773	N/A	N/A	N/A	N/A
PHROG	UHGV-0016204_45	phrog_22543	76.4	3.4e-22	N/A	unknown function
UniRef90	UHGV-0016204_45	UniRef90_A0A8D9PDT5	125.0	3.06e-35	Hydrogenase/urease nickel incorporation protein	N/A
UniRef90	UHGV-0016204_50	UniRef90_A0A8D9PDK1	67.4	0.000000000000985	Anti-repressor	N/A
PHROG	UHGV-0016204_51	phrog_9298	329.8	0	radical SAM domain protein	other
UniRef90	UHGV-0016204_51	UniRef90_UPI001C3BADA7	453.0	0	Radical SAM protein	N/A
eggNOG-mapper	UHGV-0016204_51	1235797.C816_00412	450.0	0	N/A	N/A
COG	UHGV-0016204_51	COG1032	N/A	N/A	Radical SAM superfamily enzyme YgiQ, UPF0313 family	N/A
structural_annotation	UHGV-0016204_51	MF_01865,NF010916,COG0621	N/A	N/A	N/A	N/A
PHROG	UHGV-0016204_52	phrog_757	125.6	3.1e-37	DNA methyltransferase	other
UniRef90	UHGV-0016204_52	UniRef90_A0A3A6EPW1	219.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0016204_52	397290.C810_01487	168.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-0016204_52	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
PHROG	UHGV-0016204_53	phrog_757	51.2	0.00000000000002	DNA methyltransferase	other
UniRef90	UHGV-0016204_53	UniRef90_A0A7J2R6L5	72.4	6.28e-16	DNA cytosine methyltransferase (Fragment)	N/A
eggNOG-mapper	UHGV-0016204_53	748224.HMPREF9436_03069	103.0	4.7e-27	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-0016204_53	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
KOfam	UHGV-0016204_55	K00390	62.5	1.6e-18	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0016204_55	phrog_424	133.1	2.1e-39	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0016204_55	UniRef90_A0A1H7KWC5	326.0	0	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase	N/A
eggNOG-mapper	UHGV-0016204_55	665956.HMPREF1032_00140	280.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
Pfam	UHGV-0016204_55	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0016204_55	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0016204_55	PF01507,MF_00063,NF006327,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-0016204_57	phrog_18079	59.2	7.1e-17	N/A	unknown function
eggNOG-mapper	UHGV-0016204_57	645991.Sgly_0315	102.0	2.67e-24	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0016204_57	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-0016204_57	NF007410	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0016204	Yes	36,252	56	79	1